RNA–Protein interactions for RNA: ENST00000588687.5

CCDC43-204, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 721 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-204ENST00000588687 B3GAT3O94766 335 aa20.28■□□□□ 0.84
CCDC43-204ENST00000588687 MUTP22033 750 aa20.28■□□□□ 0.84
CCDC43-204ENST00000588687 GUCY1B3Q02153 619 aa20.28■□□□□ 0.84
CCDC43-204ENST00000588687 SNW1Q13573 536 aaKnown RBP20.28■□□□□ 0.84
CCDC43-204ENST00000588687 MLF2Q15773 248 aaPredicted RBP20.28■□□□□ 0.84
CCDC43-204ENST00000588687 SLC5A9Q2M3M2 681 aa20.28■□□□□ 0.84
CCDC43-204ENST00000588687 XKR4Q5GH76 650 aa20.28■□□□□ 0.84
CCDC43-204ENST00000588687 ATF7IP2Q5U623 682 aa20.28■□□□□ 0.84
CCDC43-204ENST00000588687 CEP120Q8N960 986 aa20.28■□□□□ 0.84
CCDC43-204ENST00000588687 KXD1Q9BQD3 176 aa20.28■□□□□ 0.84
CCDC43-204ENST00000588687 POLD4Q9HCU8 107 aa20.28■□□□□ 0.84
CCDC43-204ENST00000588687 MTF2Q9Y483 593 aaPredicted RBP20.28■□□□□ 0.84
CCDC43-204ENST00000588687 LIG1P18858 919 aa20.27■□□□□ 0.84
CCDC43-204ENST00000588687 PRKCQQ04759 706 aa20.27■□□□□ 0.84
CCDC43-204ENST00000588687 PPP2R5AQ15172 486 aa20.27■□□□□ 0.84
CCDC43-204ENST00000588687 PABPC1LQ4VXU2 614 aaKnown RBP20.27■□□□□ 0.84
CCDC43-204ENST00000588687 SLC8B1Q6J4K2 584 aa20.27■□□□□ 0.84
CCDC43-204ENST00000588687 ZC3H14Q6PJT7 736 aaKnown RBP20.27■□□□□ 0.84
CCDC43-204ENST00000588687 ALKAL1Q6UXT8 129 aa20.27■□□□□ 0.84
CCDC43-204ENST00000588687 RTL10Q7L3V2 364 aa20.27■□□□□ 0.84
CCDC43-204ENST00000588687 C4orf32Q8N8J7 132 aa20.27■□□□□ 0.84
CCDC43-204ENST00000588687 SUMF1Q8NBK3 374 aa20.27■□□□□ 0.84
CCDC43-204ENST00000588687 SHDQ96IW2 340 aa20.27■□□□□ 0.84
CCDC43-204ENST00000588687 PTPRHQ9HD43 1115 aa20.27■□□□□ 0.84
CCDC43-204ENST00000588687 POLIQ9UNA4 740 aa20.27■□□□□ 0.84
CCDC43-204ENST00000588687 TNFSF13BQ9Y275 285 aa20.27■□□□□ 0.84
CCDC43-204ENST00000588687 CITO14578 2027 aa20.26■□□□□ 0.83
CCDC43-204ENST00000588687 I3L4J1 428 aa20.26■□□□□ 0.83
CCDC43-204ENST00000588687 ABLIM1O14639 778 aa20.26■□□□□ 0.83
CCDC43-204ENST00000588687 MEFVO15553 781 aaPredicted RBP20.26■□□□□ 0.83
CCDC43-204ENST00000588687 BRCC3P46736 316 aa20.26■□□□□ 0.83
CCDC43-204ENST00000588687 FXR2P51116 673 aaKnown RBP eCLIP20.26■□□□□ 0.83
CCDC43-204ENST00000588687 NEK4P51957 841 aa20.26■□□□□ 0.83
CCDC43-204ENST00000588687 EFNA5P52803 228 aa20.26■□□□□ 0.83
CCDC43-204ENST00000588687 ZNF174Q15697 407 aa20.26■□□□□ 0.83
CCDC43-204ENST00000588687 TMEM132AQ24JP5 1023 aa20.26■□□□□ 0.83
CCDC43-204ENST00000588687 TAS1R3Q7RTX0 852 aa20.26■□□□□ 0.83
CCDC43-204ENST00000588687 DAW1Q8N136 415 aa20.26■□□□□ 0.83
CCDC43-204ENST00000588687 ERMNQ8TAM6 284 aa20.26■□□□□ 0.83
CCDC43-204ENST00000588687 KCNG4Q8TDN1 519 aa20.26■□□□□ 0.83
CCDC43-204ENST00000588687 ING5Q8WYH8 240 aa20.26■□□□□ 0.83
CCDC43-204ENST00000588687 UROC1Q96N76 676 aa20.26■□□□□ 0.83
CCDC43-204ENST00000588687 OSBPL6Q9BZF3 934 aa20.26■□□□□ 0.83
CCDC43-204ENST00000588687 CDT1Q9H211 546 aa20.26■□□□□ 0.83
CCDC43-204ENST00000588687 BHMT2Q9H2M3 363 aa20.26■□□□□ 0.83
CCDC43-204ENST00000588687 LTB4R2Q9NPC1 389 aa20.26■□□□□ 0.83
CCDC43-204ENST00000588687 AVENQ9NQS1 362 aaPredicted RBP20.26■□□□□ 0.83
CCDC43-204ENST00000588687 DAXXQ9UER7 740 aaPredicted RBP20.26■□□□□ 0.83
CCDC43-204ENST00000588687 PHLPP2Q6ZVD8 1323 aa20.26■□□□□ 0.83
CCDC43-204ENST00000588687 SMIM28A0A1B0GU29 152 aa20.25■□□□□ 0.83
CCDC43-204ENST00000588687 ARHGEF37A1IGU5 675 aa20.25■□□□□ 0.83
CCDC43-204ENST00000588687 NRG2O14511 850 aaPredicted RBP20.25■□□□□ 0.83
CCDC43-204ENST00000588687 TBC1D4O60343 1298 aa20.25■□□□□ 0.83
CCDC43-204ENST00000588687 FCARP24071 287 aa20.25■□□□□ 0.83
CCDC43-204ENST00000588687 GRM5P41594 1212 aa20.25■□□□□ 0.83
CCDC43-204ENST00000588687 ROR1Q01973 937 aa20.25■□□□□ 0.83
CCDC43-204ENST00000588687 SLC44A4Q53GD3 710 aa20.25■□□□□ 0.83
CCDC43-204ENST00000588687 HAUS3Q68CZ6 603 aa20.25■□□□□ 0.83
CCDC43-204ENST00000588687 KIFAP3Q92845 792 aa20.25■□□□□ 0.83
CCDC43-204ENST00000588687 ZMAT2Q96NC0 199 aaKnown RBP20.25■□□□□ 0.83
CCDC43-204ENST00000588687 FOXP1Q9H334 677 aaPredicted RBP20.25■□□□□ 0.83
CCDC43-204ENST00000588687 WDR27A2RRH5 827 aa20.24■□□□□ 0.83
CCDC43-204ENST00000588687 ECI2O75521 394 aa20.24■□□□□ 0.83
CCDC43-204ENST00000588687 ABLIM3O94929 683 aa20.24■□□□□ 0.83
CCDC43-204ENST00000588687 RHOP08100 348 aa20.24■□□□□ 0.83
CCDC43-204ENST00000588687 CEBPBP17676 345 aa20.24■□□□□ 0.83
CCDC43-204ENST00000588687 NBR1Q14596 966 aa20.24■□□□□ 0.83
CCDC43-204ENST00000588687 ZNF528Q3MIS6 628 aa20.24■□□□□ 0.83
CCDC43-204ENST00000588687 TTC38Q5R3I4 469 aa20.24■□□□□ 0.83
CCDC43-204ENST00000588687 ANKS3Q6ZW76 656 aa20.24■□□□□ 0.83
CCDC43-204ENST00000588687 KIAA2013Q8IYS2 634 aa20.24■□□□□ 0.83
CCDC43-204ENST00000588687 PLA2G2FQ9BZM2 168 aa20.24■□□□□ 0.83
CCDC43-204ENST00000588687 ARHGAP28Q9P2N2 729 aa20.24■□□□□ 0.83
CCDC43-204ENST00000588687 F5P12259 2224 aa20.23■□□□□ 0.83
CCDC43-204ENST00000588687 CD72P21854 359 aa20.23■□□□□ 0.83
CCDC43-204ENST00000588687 PROZP22891 400 aa20.23■□□□□ 0.83
CCDC43-204ENST00000588687 TARSP26639 723 aaKnown RBP20.23■□□□□ 0.83
CCDC43-204ENST00000588687 CCT6AP40227 531 aaKnown RBP20.23■□□□□ 0.83
CCDC43-204ENST00000588687 NPTX2P47972 431 aa20.23■□□□□ 0.83
CCDC43-204ENST00000588687 PFKPQ01813 784 aa20.23■□□□□ 0.83
CCDC43-204ENST00000588687 MAPK7Q13164 816 aa20.23■□□□□ 0.83
CCDC43-204ENST00000588687 SAFBQ15424 915 aaKnown RBP eCLIP20.23■□□□□ 0.83
CCDC43-204ENST00000588687 PRSS36Q5K4E3 855 aa20.23■□□□□ 0.83
CCDC43-204ENST00000588687 ZNF687Q8N1G0 1237 aa20.23■□□□□ 0.83
CCDC43-204ENST00000588687 DCLK2Q8N568 766 aa20.23■□□□□ 0.83
CCDC43-204ENST00000588687 IGSF22Q8N9C0 903 aa20.23■□□□□ 0.83
CCDC43-204ENST00000588687 RUBCNQ92622 972 aa20.23■□□□□ 0.83
CCDC43-204ENST00000588687 NELL1Q92832 810 aa20.23■□□□□ 0.83
CCDC43-204ENST00000588687 CLDN23Q96B33 292 aa20.23■□□□□ 0.83
CCDC43-204ENST00000588687 C8orf76Q96K31 380 aa20.23■□□□□ 0.83
CCDC43-204ENST00000588687 IFT74Q96LB3 600 aa20.23■□□□□ 0.83
CCDC43-204ENST00000588687 ACO2Q99798 780 aaKnown RBP20.23■□□□□ 0.83
CCDC43-204ENST00000588687 GDE1Q9NZC3 331 aa20.23■□□□□ 0.83
CCDC43-204ENST00000588687 FBXO4Q9UKT5 387 aa20.23■□□□□ 0.83
CCDC43-204ENST00000588687 MRPS23Q9Y3D9 190 aaKnown RBP20.23■□□□□ 0.83
CCDC43-204ENST00000588687 FZD5Q13467 585 aa20.22■□□□□ 0.83
CCDC43-204ENST00000588687 UBXN2BQ14CS0 331 aa20.22■□□□□ 0.83
CCDC43-204ENST00000588687 ZNF568Q3ZCX4 644 aa20.22■□□□□ 0.83
CCDC43-204ENST00000588687 VARS2Q5ST30 1063 aaKnown RBP20.22■□□□□ 0.83
CCDC43-204ENST00000588687 FBXO18Q8NFZ0 1043 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms