RNA–Protein interactions for RNA: ENST00000588617.1

VMP1-208, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 884 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-208ENST00000588617 HNRNPDLO14979 420 aaKnown RBP9.02□□□□□ -0.97
VMP1-208ENST00000588617 TBC1D4O60343 1298 aa9.02□□□□□ -0.97
VMP1-208ENST00000588617 VEGFAP15692 232 aaPredicted RBP9.02□□□□□ -0.97
VMP1-208ENST00000588617 FLT3LGP49771 235 aa9.02□□□□□ -0.97
VMP1-208ENST00000588617 SOX8P57073 446 aa9.02□□□□□ -0.97
VMP1-208ENST00000588617 TMEM62Q0P6H9 643 aa9.02□□□□□ -0.97
VMP1-208ENST00000588617 INTS11Q5TA45 600 aaKnown RBP9.02□□□□□ -0.97
VMP1-208ENST00000588617 RFX8Q6ZV50 586 aa9.02□□□□□ -0.97
VMP1-208ENST00000588617 TAS1R1Q7RTX1 841 aa9.02□□□□□ -0.97
VMP1-208ENST00000588617 UNC5BQ8IZJ1 945 aa9.02□□□□□ -0.97
VMP1-208ENST00000588617 GIMAP8Q8ND71 665 aaPredicted RBP9.02□□□□□ -0.97
VMP1-208ENST00000588617 PIK3C3Q8NEB9 887 aa9.02□□□□□ -0.97
VMP1-208ENST00000588617 OR7D4Q8NG98 312 aa9.02□□□□□ -0.97
VMP1-208ENST00000588617 TNPO1Q92973 898 aaKnown RBP9.02□□□□□ -0.97
VMP1-208ENST00000588617 SNX22Q96L94 193 aa9.02□□□□□ -0.97
VMP1-208ENST00000588617 UIMC1Q96RL1 719 aa9.02□□□□□ -0.97
VMP1-208ENST00000588617 TMEM209Q96SK2 561 aa9.02□□□□□ -0.97
VMP1-208ENST00000588617 C1orf43Q9BWL3 253 aa9.02□□□□□ -0.97
VMP1-208ENST00000588617 SENP6Q9GZR1 1112 aaPredicted RBP9.02□□□□□ -0.97
VMP1-208ENST00000588617 RNF32Q9H0A6 362 aa9.02□□□□□ -0.97
VMP1-208ENST00000588617 TLR9Q9NR96 1032 aa9.02□□□□□ -0.97
VMP1-208ENST00000588617 LANCL2Q9NS86 450 aa9.02□□□□□ -0.97
VMP1-208ENST00000588617 KLHL14Q9P2G3 628 aa9.02□□□□□ -0.97
VMP1-208ENST00000588617 FBXO2Q9UK22 296 aaPredicted RBP9.02□□□□□ -0.97
VMP1-208ENST00000588617 GJD2Q9UKL4 321 aa9.02□□□□□ -0.97
VMP1-208ENST00000588617 MAN2B2Q9Y2E5 1009 aa9.02□□□□□ -0.97
VMP1-208ENST00000588617 CRYL1Q9Y2S2 319 aa9.02□□□□□ -0.97
VMP1-208ENST00000588617 YBX2Q9Y2T7 364 aaKnown RBP9.02□□□□□ -0.97
VMP1-208ENST00000588617 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.02□□□□□ -0.97
VMP1-208ENST00000588617 DYTNA2CJ06 578 aa9.01□□□□□ -0.97
VMP1-208ENST00000588617 F2RL2O00254 374 aa9.01□□□□□ -0.97
VMP1-208ENST00000588617 NPC1O15118 1278 aa9.01□□□□□ -0.97
VMP1-208ENST00000588617 IRAK2O43187 625 aa9.01□□□□□ -0.97
VMP1-208ENST00000588617 GPR32O75388 356 aa9.01□□□□□ -0.97
VMP1-208ENST00000588617 ANXA2P07355 339 aaKnown RBP9.01□□□□□ -0.97
VMP1-208ENST00000588617 HDCP19113 662 aa9.01□□□□□ -0.97
VMP1-208ENST00000588617 KCNJ5P48544 419 aa9.01□□□□□ -0.97
VMP1-208ENST00000588617 CNGB1Q14028 1251 aaPredicted RBP9.01□□□□□ -0.97
VMP1-208ENST00000588617 ZNF783Q6ZMS7 281 aa9.01□□□□□ -0.97
VMP1-208ENST00000588617 FAM90A1Q86YD7 464 aa9.01□□□□□ -0.97
VMP1-208ENST00000588617 SUGP1Q8IWZ8 645 aaKnown RBP9.01□□□□□ -0.97
VMP1-208ENST00000588617 Q8N3U1 123 aa9.01□□□□□ -0.97
VMP1-208ENST00000588617 FANCBQ8NB91 859 aa9.01□□□□□ -0.97
VMP1-208ENST00000588617 FLCNQ8NFG4 579 aa9.01□□□□□ -0.97
VMP1-208ENST00000588617 USP13Q92995 863 aaPredicted RBP9.01□□□□□ -0.97
VMP1-208ENST00000588617 ADAM7Q9H2U9 754 aa9.01□□□□□ -0.97
VMP1-208ENST00000588617 TMEM140Q9NV12 185 aa9.01□□□□□ -0.97
VMP1-208ENST00000588617 ACKR2O00590 384 aa9□□□□□ -0.97
VMP1-208ENST00000588617 ARHGAP6O43182 974 aa9□□□□□ -0.97
VMP1-208ENST00000588617 DAPK3O43293 454 aa9□□□□□ -0.97
VMP1-208ENST00000588617 THAP12O43422 761 aa9□□□□□ -0.97
VMP1-208ENST00000588617 DYRK3O43781 588 aa9□□□□□ -0.97
VMP1-208ENST00000588617 ARFIP2P53365 341 aa9□□□□□ -0.97
VMP1-208ENST00000588617 EXOSC9Q06265 439 aaKnown RBP9□□□□□ -0.97
VMP1-208ENST00000588617 FBXO38Q6PIJ6 1188 aa9□□□□□ -0.97
VMP1-208ENST00000588617 BCL6BQ8N143 479 aaPredicted RBP9□□□□□ -0.97
VMP1-208ENST00000588617 ABHD4Q8TB40 342 aa9□□□□□ -0.97
VMP1-208ENST00000588617 STON2Q8WXE9 905 aa9□□□□□ -0.97
VMP1-208ENST00000588617 FAM167BQ9BTA0 163 aa9□□□□□ -0.97
VMP1-208ENST00000588617 TRPS1Q9UHF7 1281 aa9□□□□□ -0.97
VMP1-208ENST00000588617 AJAP1Q9UKB5 411 aaPredicted RBP9□□□□□ -0.97
VMP1-208ENST00000588617 PLA2G2DQ9UNK4 145 aa9□□□□□ -0.97
VMP1-208ENST00000588617 A0A0G2JNJ9 132 aa8.99□□□□□ -0.97
VMP1-208ENST00000588617 TRIM43BA6NCK2 446 aa8.99□□□□□ -0.97
VMP1-208ENST00000588617 EYA2O00167 538 aa8.99□□□□□ -0.97
VMP1-208ENST00000588617 BTN3A1O00481 513 aa8.99□□□□□ -0.97
VMP1-208ENST00000588617 SNX2O60749 519 aa8.99□□□□□ -0.97
VMP1-208ENST00000588617 MT-ND5P03915 603 aa8.99□□□□□ -0.97
VMP1-208ENST00000588617 MYL4P12829 197 aa8.99□□□□□ -0.97
VMP1-208ENST00000588617 SERPINF1P36955 418 aa8.99□□□□□ -0.97
VMP1-208ENST00000588617 CTXN1P60606 82 aa8.99□□□□□ -0.97
VMP1-208ENST00000588617 ATP8B2P98198 1209 aa8.99□□□□□ -0.97
VMP1-208ENST00000588617 SLC13A2Q13183 592 aa8.99□□□□□ -0.97
VMP1-208ENST00000588617 SPARCL1Q14515 664 aa8.99□□□□□ -0.97
VMP1-208ENST00000588617 INTS5Q6P9B9 1019 aaKnown RBP8.99□□□□□ -0.97
VMP1-208ENST00000588617 TMTC2Q8N394 836 aa8.99□□□□□ -0.97
VMP1-208ENST00000588617 GALNT15Q8N3T1 639 aa8.99□□□□□ -0.97
VMP1-208ENST00000588617 PDILTQ8N807 584 aa8.99□□□□□ -0.97
VMP1-208ENST00000588617 FBXO18Q8NFZ0 1043 aa8.99□□□□□ -0.97
VMP1-208ENST00000588617 MAML1Q92585 1016 aa8.99□□□□□ -0.97
VMP1-208ENST00000588617 TRIM43Q96BQ3 446 aaPredicted RBP8.99□□□□□ -0.97
VMP1-208ENST00000588617 SLAMF7Q9NQ25 335 aa8.99□□□□□ -0.97
VMP1-208ENST00000588617 Q9UFV3 132 aa8.99□□□□□ -0.97
VMP1-208ENST00000588617 SRRDQ9UH36 339 aa8.99□□□□□ -0.97
VMP1-208ENST00000588617 CDC42EP3Q9UKI2 254 aa8.99□□□□□ -0.97
VMP1-208ENST00000588617 SYT5O00445 386 aa8.98□□□□□ -0.97
VMP1-208ENST00000588617 TRIM38O00635 465 aa8.98□□□□□ -0.97
VMP1-208ENST00000588617 RNASEH2AO75792 299 aaKnown RBP8.98□□□□□ -0.97
VMP1-208ENST00000588617 PRNPP04156 253 aa8.98□□□□□ -0.97
VMP1-208ENST00000588617 C8BP07358 591 aa8.98□□□□□ -0.97
VMP1-208ENST00000588617 PIK3CGP48736 1102 aa8.98□□□□□ -0.97
VMP1-208ENST00000588617 FOXO1Q12778 655 aa8.98□□□□□ -0.97
VMP1-208ENST00000588617 KCTD2Q14681 263 aa8.98□□□□□ -0.97
VMP1-208ENST00000588617 TMEM200BQ69YZ2 307 aa8.98□□□□□ -0.97
VMP1-208ENST00000588617 RETSATQ6NUM9 610 aa8.98□□□□□ -0.97
VMP1-208ENST00000588617 JMJD6Q6NYC1 403 aaPredicted RBP8.98□□□□□ -0.97
VMP1-208ENST00000588617 RNF44Q7L0R7 432 aa8.98□□□□□ -0.97
VMP1-208ENST00000588617 VSIG10LQ86VR7 867 aa8.98□□□□□ -0.97
VMP1-208ENST00000588617 NKD2Q969F2 451 aaPredicted RBP8.98□□□□□ -0.97
VMP1-208ENST00000588617 EIF2AQ9BY44 585 aaKnown RBP8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms