RNA–Protein interactions for RNA: ENST00000588284.1

CHMP1B-202, Transcript of charged multivesicular body protein 1B, humanhuman

TSL 3

Gene CHMP1B, Length 435 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1B-202ENST00000588284 GRM5P41594 1212 aa11.34□□□□□ -0.59
CHMP1B-202ENST00000588284 YARSP54577 528 aaKnown RBP11.34□□□□□ -0.59
CHMP1B-202ENST00000588284 KLHL30Q0D2K2 578 aa11.34□□□□□ -0.59
CHMP1B-202ENST00000588284 BIRC3Q13489 604 aa11.34□□□□□ -0.59
CHMP1B-202ENST00000588284 RAPGEF1Q13905 1077 aa11.34□□□□□ -0.59
CHMP1B-202ENST00000588284 SPA17Q15506 151 aa11.34□□□□□ -0.59
CHMP1B-202ENST00000588284 E4F1Q66K89 784 aaPredicted RBP11.34□□□□□ -0.59
CHMP1B-202ENST00000588284 IQCEQ6IPM2 695 aa11.34□□□□□ -0.59
CHMP1B-202ENST00000588284 VPS36Q86VN1 386 aa11.34□□□□□ -0.59
CHMP1B-202ENST00000588284 USP38Q8NB14 1042 aa11.34□□□□□ -0.59
CHMP1B-202ENST00000588284 PPP1R13LQ8WUF5 828 aa11.34□□□□□ -0.59
CHMP1B-202ENST00000588284 ZNF516Q92618 1163 aa11.34□□□□□ -0.59
CHMP1B-202ENST00000588284 JAKMIP2Q96AA8 810 aa11.34□□□□□ -0.59
CHMP1B-202ENST00000588284 ANKRD36BP1Q96IX9 119 aa11.34□□□□□ -0.59
CHMP1B-202ENST00000588284 CPB2Q96IY4 423 aa11.34□□□□□ -0.59
CHMP1B-202ENST00000588284 EIF3CQ99613 913 aaKnown RBP11.34□□□□□ -0.59
CHMP1B-202ENST00000588284 DEF6Q9H4E7 631 aa11.34□□□□□ -0.59
CHMP1B-202ENST00000588284 NHEJ1Q9H9Q4 299 aaPredicted RBP11.34□□□□□ -0.59
CHMP1B-202ENST00000588284 LUC7LQ9NQ29 371 aaKnown RBP11.34□□□□□ -0.59
CHMP1B-202ENST00000588284 STARD7Q9NQZ5 370 aa11.34□□□□□ -0.59
CHMP1B-202ENST00000588284 CHST12Q9NRB3 414 aa11.34□□□□□ -0.59
CHMP1B-202ENST00000588284 TSKSQ9UJT2 592 aa11.34□□□□□ -0.59
CHMP1B-202ENST00000588284 PHF24Q9UPV7 400 aa11.34□□□□□ -0.59
CHMP1B-202ENST00000588284 PPP2R2CQ9Y2T4 447 aa11.34□□□□□ -0.59
CHMP1B-202ENST00000588284 R3HCC1Q9Y3T6 440 aaKnown RBP11.34□□□□□ -0.59
CHMP1B-202ENST00000588284 FHOD1Q9Y613 1164 aa11.34□□□□□ -0.59
CHMP1B-202ENST00000588284 CDY2AQ9Y6F7 541 aa11.34□□□□□ -0.59
CHMP1B-202ENST00000588284 GRIN2DO15399 1336 aa11.34□□□□□ -0.59
CHMP1B-202ENST00000588284 SOWAHDA6NJG2 315 aa11.33□□□□□ -0.6
CHMP1B-202ENST00000588284 ARVCFO00192 962 aa11.33□□□□□ -0.6
CHMP1B-202ENST00000588284 AKR1B10O60218 316 aa11.33□□□□□ -0.6
CHMP1B-202ENST00000588284 RPS6KA5O75582 802 aa11.33□□□□□ -0.6
CHMP1B-202ENST00000588284 GFPT2O94808 682 aa11.33□□□□□ -0.6
CHMP1B-202ENST00000588284 NDUFA10O95299 355 aa11.33□□□□□ -0.6
CHMP1B-202ENST00000588284 HLA-DRAP01903 254 aa11.33□□□□□ -0.6
CHMP1B-202ENST00000588284 TMEM191BP0C7N4 346 aa11.33□□□□□ -0.6
CHMP1B-202ENST00000588284 CLCN1P35523 988 aa11.33□□□□□ -0.6
CHMP1B-202ENST00000588284 SOX5P35711 763 aa11.33□□□□□ -0.6
CHMP1B-202ENST00000588284 TNFSF9P41273 254 aa11.33□□□□□ -0.6
CHMP1B-202ENST00000588284 PRKCIP41743 596 aa11.33□□□□□ -0.6
CHMP1B-202ENST00000588284 JAM2P57087 298 aa11.33□□□□□ -0.6
CHMP1B-202ENST00000588284 TRPC3Q13507 836 aa11.33□□□□□ -0.6
CHMP1B-202ENST00000588284 DRAP1Q14919 205 aaPredicted RBP11.33□□□□□ -0.6
CHMP1B-202ENST00000588284 ENOX2Q16206 610 aaKnown RBP11.33□□□□□ -0.6
CHMP1B-202ENST00000588284 SGSM1Q2NKQ1 1148 aa11.33□□□□□ -0.6
CHMP1B-202ENST00000588284 SEZ6Q53EL9 994 aa11.33□□□□□ -0.6
CHMP1B-202ENST00000588284 FAM26DQ5JW98 314 aa11.33□□□□□ -0.6
CHMP1B-202ENST00000588284 ZBTB41Q5SVQ8 909 aa11.33□□□□□ -0.6
CHMP1B-202ENST00000588284 PHLDB3Q6NSJ2 640 aa11.33□□□□□ -0.6
CHMP1B-202ENST00000588284 RAD9BQ6WBX8 426 aa11.33□□□□□ -0.6
CHMP1B-202ENST00000588284 TRAPPC11Q7Z392 1133 aa11.33□□□□□ -0.6
CHMP1B-202ENST00000588284 IRF2BP2Q7Z5L9 587 aa11.33□□□□□ -0.6
CHMP1B-202ENST00000588284 HACE1Q8IYU2 909 aa11.33□□□□□ -0.6
CHMP1B-202ENST00000588284 SLC43A3Q8NBI5 491 aa11.33□□□□□ -0.6
CHMP1B-202ENST00000588284 TAS1R2Q8TE23 839 aa11.33□□□□□ -0.6
CHMP1B-202ENST00000588284 SH3TC2Q8TF17 1288 aa11.33□□□□□ -0.6
CHMP1B-202ENST00000588284 TAF4BQ92750 862 aa11.33□□□□□ -0.6
CHMP1B-202ENST00000588284 FAXDC2Q96IV6 333 aa11.33□□□□□ -0.6
CHMP1B-202ENST00000588284 IMPG2Q9BZV3 1241 aa11.33□□□□□ -0.6
CHMP1B-202ENST00000588284 TRIM6Q9C030 488 aaPredicted RBP11.33□□□□□ -0.6
CHMP1B-202ENST00000588284 TOPORSQ9NS56 1045 aaPredicted RBP11.33□□□□□ -0.6
CHMP1B-202ENST00000588284 DERAQ9Y315 318 aa11.33□□□□□ -0.6
CHMP1B-202ENST00000588284 ADGRG1Q9Y653 693 aa11.33□□□□□ -0.6
CHMP1B-202ENST00000588284 SCN10AQ9Y5Y9 1956 aa11.33□□□□□ -0.6
CHMP1B-202ENST00000588284 PDE4DIPQ5VU43 2346 aa11.33□□□□□ -0.6
CHMP1B-202ENST00000588284 MROH7Q68CQ1 1323 aa11.33□□□□□ -0.6
CHMP1B-202ENST00000588284 LACTBL1A8MY62 500 aa11.32□□□□□ -0.6
CHMP1B-202ENST00000588284 DNM1LO00429 736 aa11.32□□□□□ -0.6
CHMP1B-202ENST00000588284 NPTXRO95502 500 aa11.32□□□□□ -0.6
CHMP1B-202ENST00000588284 CAPN2P17655 700 aa11.32□□□□□ -0.6
CHMP1B-202ENST00000588284 FGFR4P22455 802 aa11.32□□□□□ -0.6
CHMP1B-202ENST00000588284 TBXAS1P24557 533 aaPredicted RBP11.32□□□□□ -0.6
CHMP1B-202ENST00000588284 EIF4A3P38919 411 aaKnown RBP11.32□□□□□ -0.6
CHMP1B-202ENST00000588284 THPOP40225 353 aa11.32□□□□□ -0.6
CHMP1B-202ENST00000588284 PIK3CAP42336 1068 aa11.32□□□□□ -0.6
CHMP1B-202ENST00000588284 BPIFB4P59827 614 aa11.32□□□□□ -0.6
CHMP1B-202ENST00000588284 OSTNP61366 133 aa11.32□□□□□ -0.6
CHMP1B-202ENST00000588284 GCNT1Q02742 428 aa11.32□□□□□ -0.6
CHMP1B-202ENST00000588284 PTPN14Q15678 1187 aa11.32□□□□□ -0.6
CHMP1B-202ENST00000588284 PKN2Q16513 984 aaKnown RBP11.32□□□□□ -0.6
CHMP1B-202ENST00000588284 TDRD12Q587J7 1177 aaKnown RBP11.32□□□□□ -0.6
CHMP1B-202ENST00000588284 C10orf76Q5T2E6 689 aa11.32□□□□□ -0.6
CHMP1B-202ENST00000588284 CDR2LQ86X02 465 aaPredicted RBP11.32□□□□□ -0.6
CHMP1B-202ENST00000588284 PPM1KQ8N3J5 372 aa11.32□□□□□ -0.6
CHMP1B-202ENST00000588284 DHX38Q92620 1227 aaKnown RBP11.32□□□□□ -0.6
CHMP1B-202ENST00000588284 SEMA4DQ92854 862 aa11.32□□□□□ -0.6
CHMP1B-202ENST00000588284 RNF208Q9H0X6 261 aa11.32□□□□□ -0.6
CHMP1B-202ENST00000588284 UNC93B1Q9H1C4 597 aa11.32□□□□□ -0.6
CHMP1B-202ENST00000588284 PAK6Q9NQU5 681 aaPredicted RBP11.32□□□□□ -0.6
CHMP1B-202ENST00000588284 C1orf112Q9NSG2 853 aa11.32□□□□□ -0.6
CHMP1B-202ENST00000588284 TRMT1Q9NXH9 659 aaKnown RBP11.32□□□□□ -0.6
CHMP1B-202ENST00000588284 ARHGAP20Q9P2F6 1191 aa11.32□□□□□ -0.6
CHMP1B-202ENST00000588284 PIN4Q9Y237 131 aaKnown RBP11.32□□□□□ -0.6
CHMP1B-202ENST00000588284 NOC2LQ9Y3T9 749 aaKnown RBP11.32□□□□□ -0.6
CHMP1B-202ENST00000588284 C2CD2Q9Y426 696 aa11.32□□□□□ -0.6
CHMP1B-202ENST00000588284 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.32□□□□□ -0.6
CHMP1B-202ENST00000588284 A0A1W2PQ45 241 aaPredicted RBP11.31□□□□□ -0.6
CHMP1B-202ENST00000588284 A0A1W2PQY0 241 aa11.31□□□□□ -0.6
CHMP1B-202ENST00000588284 XPOTO43592 962 aaKnown RBP11.31□□□□□ -0.6
CHMP1B-202ENST00000588284 LCA5LO95447 670 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms