RNA–Protein interactions for RNA: ENST00000588269.1

PRKCSH-207, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 5

Gene PRKCSH, Length 557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-207ENST00000588269 USP20Q9Y2K6 914 aa12.8□□□□□ -0.36
PRKCSH-207ENST00000588269 PCDHB13Q9Y5F0 798 aa12.8□□□□□ -0.36
PRKCSH-207ENST00000588269 KMT2EQ8IZD2 1858 aa12.79□□□□□ -0.36
PRKCSH-207ENST00000588269 TMEM221A6NGB7 291 aa12.79□□□□□ -0.36
PRKCSH-207ENST00000588269 M0R296 226 aa12.79□□□□□ -0.36
PRKCSH-207ENST00000588269 OGTO15294 1046 aa12.79□□□□□ -0.36
PRKCSH-207ENST00000588269 CLASP2O75122 1294 aaKnown RBP12.79□□□□□ -0.36
PRKCSH-207ENST00000588269 B3GAT3O94766 335 aa12.79□□□□□ -0.36
PRKCSH-207ENST00000588269 KIF4AO95239 1232 aa12.79□□□□□ -0.36
PRKCSH-207ENST00000588269 GCNT3O95395 438 aa12.79□□□□□ -0.36
PRKCSH-207ENST00000588269 GLUD1P00367 558 aa12.79□□□□□ -0.36
PRKCSH-207ENST00000588269 C1RP00736 705 aa12.79□□□□□ -0.36
PRKCSH-207ENST00000588269 KCNE1P15382 129 aa12.79□□□□□ -0.36
PRKCSH-207ENST00000588269 GTF2BQ00403 316 aa12.79□□□□□ -0.36
PRKCSH-207ENST00000588269 DSG1Q02413 1049 aa12.79□□□□□ -0.36
PRKCSH-207ENST00000588269 DNM1Q05193 864 aaKnown RBP12.79□□□□□ -0.36
PRKCSH-207ENST00000588269 GLRA4Q5JXX5 417 aa12.79□□□□□ -0.36
PRKCSH-207ENST00000588269 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.79□□□□□ -0.36
PRKCSH-207ENST00000588269 CD302Q8IX05 232 aa12.79□□□□□ -0.36
PRKCSH-207ENST00000588269 EDAQ92838 391 aa12.79□□□□□ -0.36
PRKCSH-207ENST00000588269 DHX58Q96C10 678 aa12.79□□□□□ -0.36
PRKCSH-207ENST00000588269 SPATA32Q96LK8 384 aa12.79□□□□□ -0.36
PRKCSH-207ENST00000588269 PPP1R10Q96QC0 940 aaKnown RBP12.79□□□□□ -0.36
PRKCSH-207ENST00000588269 ACCSQ96QU6 501 aa12.79□□□□□ -0.36
PRKCSH-207ENST00000588269 TTPALQ9BTX7 342 aa12.79□□□□□ -0.36
PRKCSH-207ENST00000588269 SCAND2PQ9GZW5 306 aaPredicted RBP12.79□□□□□ -0.36
PRKCSH-207ENST00000588269 TMEM206Q9H813 350 aa12.79□□□□□ -0.36
PRKCSH-207ENST00000588269 RPF1Q9H9Y2 349 aaKnown RBP12.79□□□□□ -0.36
PRKCSH-207ENST00000588269 FAM86C1Q9NVL1 165 aa12.79□□□□□ -0.36
PRKCSH-207ENST00000588269 NUB1Q9Y5A7 615 aa12.79□□□□□ -0.36
PRKCSH-207ENST00000588269 SMIM28A0A1B0GU29 152 aa12.78□□□□□ -0.36
PRKCSH-207ENST00000588269 ARHGEF37A1IGU5 675 aa12.78□□□□□ -0.36
PRKCSH-207ENST00000588269 MYMKA6NI61 221 aa12.78□□□□□ -0.36
PRKCSH-207ENST00000588269 LOC730098B7Z3J9 87 aa12.78□□□□□ -0.36
PRKCSH-207ENST00000588269 C2CD2LO14523 706 aa12.78□□□□□ -0.36
PRKCSH-207ENST00000588269 ABLIM1O14639 778 aa12.78□□□□□ -0.36
PRKCSH-207ENST00000588269 RPL9P32969 192 aaKnown RBP12.78□□□□□ -0.36
PRKCSH-207ENST00000588269 VCPP55072 806 aaKnown RBP12.78□□□□□ -0.36
PRKCSH-207ENST00000588269 ASIC1P78348 528 aa12.78□□□□□ -0.36
PRKCSH-207ENST00000588269 NUCB2P80303 420 aa12.78□□□□□ -0.36
PRKCSH-207ENST00000588269 CBX2Q14781 532 aaPredicted RBP12.78□□□□□ -0.36
PRKCSH-207ENST00000588269 XKR4Q5GH76 650 aa12.78□□□□□ -0.36
PRKCSH-207ENST00000588269 DCLRE1AQ6PJP8 1040 aa12.78□□□□□ -0.36
PRKCSH-207ENST00000588269 TRIM67Q6ZTA4 783 aa12.78□□□□□ -0.36
PRKCSH-207ENST00000588269 RNF168Q8IYW5 571 aaPredicted RBP12.78□□□□□ -0.36
PRKCSH-207ENST00000588269 SYCP3Q8IZU3 236 aa12.78□□□□□ -0.36
PRKCSH-207ENST00000588269 CEP120Q8N960 986 aa12.78□□□□□ -0.36
PRKCSH-207ENST00000588269 FEZF2Q8TBJ5 459 aa12.78□□□□□ -0.36
PRKCSH-207ENST00000588269 LRRC15Q8TF66 581 aa12.78□□□□□ -0.36
PRKCSH-207ENST00000588269 AUTS2Q8WXX7 1259 aa12.78□□□□□ -0.36
PRKCSH-207ENST00000588269 PBXIP1Q96AQ6 731 aa12.78□□□□□ -0.36
PRKCSH-207ENST00000588269 PANK4Q9NVE7 773 aa12.78□□□□□ -0.36
PRKCSH-207ENST00000588269 MIOSQ9NXC5 875 aa12.78□□□□□ -0.36
PRKCSH-207ENST00000588269 FNIP2Q9P278 1114 aa12.78□□□□□ -0.36
PRKCSH-207ENST00000588269 USP25Q9UHP3 1055 aa12.78□□□□□ -0.36
PRKCSH-207ENST00000588269 WDFY4Q6ZS81 3184 aa12.77□□□□□ -0.36
PRKCSH-207ENST00000588269 FRMD3A2A2Y4 597 aa12.77□□□□□ -0.37
PRKCSH-207ENST00000588269 PODXLO00592 558 aa12.77□□□□□ -0.37
PRKCSH-207ENST00000588269 KIAA0391O15091 583 aaKnown RBP12.77□□□□□ -0.37
PRKCSH-207ENST00000588269 PDGFBP01127 241 aaPredicted RBP12.77□□□□□ -0.37
PRKCSH-207ENST00000588269 CNPP09543 421 aaKnown RBP12.77□□□□□ -0.37
PRKCSH-207ENST00000588269 CXCL8P10145 99 aa12.77□□□□□ -0.37
PRKCSH-207ENST00000588269 PAX3P23760 479 aa12.77□□□□□ -0.37
PRKCSH-207ENST00000588269 NMT1P30419 496 aaKnown RBP12.77□□□□□ -0.37
PRKCSH-207ENST00000588269 MTHFRP42898 656 aa12.77□□□□□ -0.37
PRKCSH-207ENST00000588269 ZXDAP98168 799 aa12.77□□□□□ -0.37
PRKCSH-207ENST00000588269 POU5F1Q01860 360 aaKnown RBP12.77□□□□□ -0.37
PRKCSH-207ENST00000588269 PKP1Q13835 747 aa12.77□□□□□ -0.37
PRKCSH-207ENST00000588269 KCNC3Q14003 757 aa12.77□□□□□ -0.37
PRKCSH-207ENST00000588269 L1TD1Q5T7N2 865 aaKnown RBP12.77□□□□□ -0.37
PRKCSH-207ENST00000588269 FAM171A1Q5VUB5 890 aa12.77□□□□□ -0.37
PRKCSH-207ENST00000588269 RESP18Q5W5W9 173 aa12.77□□□□□ -0.37
PRKCSH-207ENST00000588269 ADALQ6DHV7 355 aa12.77□□□□□ -0.37
PRKCSH-207ENST00000588269 SHC4Q6S5L8 630 aa12.77□□□□□ -0.37
PRKCSH-207ENST00000588269 CYP26C1Q6V0L0 522 aa12.77□□□□□ -0.37
PRKCSH-207ENST00000588269 ANKS3Q6ZW76 656 aa12.77□□□□□ -0.37
PRKCSH-207ENST00000588269 ZNF720Q7Z2F6 126 aa12.77□□□□□ -0.37
PRKCSH-207ENST00000588269 CEP57Q86XR8 500 aa12.77□□□□□ -0.37
PRKCSH-207ENST00000588269 HASPINQ8TF76 798 aa12.77□□□□□ -0.37
PRKCSH-207ENST00000588269 HDAC7Q8WUI4 952 aa12.77□□□□□ -0.37
PRKCSH-207ENST00000588269 RIN2Q8WYP3 895 aaPredicted RBP12.77□□□□□ -0.37
PRKCSH-207ENST00000588269 PIK3R5Q8WYR1 880 aa12.77□□□□□ -0.37
PRKCSH-207ENST00000588269 POMGNT1Q8WZA1 660 aa12.77□□□□□ -0.37
PRKCSH-207ENST00000588269 KIF12Q96FN5 646 aa12.77□□□□□ -0.37
PRKCSH-207ENST00000588269 KLHL5Q96PQ7 755 aa12.77□□□□□ -0.37
PRKCSH-207ENST00000588269 PHF7Q9BWX1 381 aaPredicted RBP12.77□□□□□ -0.37
PRKCSH-207ENST00000588269 VN1R3Q9BXE9 311 aa12.77□□□□□ -0.37
PRKCSH-207ENST00000588269 PANK2Q9BZ23 570 aa12.77□□□□□ -0.37
PRKCSH-207ENST00000588269 TRIM9Q9C026 710 aa12.77□□□□□ -0.37
PRKCSH-207ENST00000588269 CHST7Q9NS84 486 aa12.77□□□□□ -0.37
PRKCSH-207ENST00000588269 KBTBD4Q9NVX7 518 aa12.77□□□□□ -0.37
PRKCSH-207ENST00000588269 UBQLN1Q9UMX0 589 aaKnown RBP12.77□□□□□ -0.37
PRKCSH-207ENST00000588269 NR2E1Q9Y466 385 aa12.77□□□□□ -0.37
PRKCSH-207ENST00000588269 UBE4BO95155 1302 aa12.77□□□□□ -0.37
PRKCSH-207ENST00000588269 CITO14578 2027 aa12.76□□□□□ -0.37
PRKCSH-207ENST00000588269 A0A0B4J269 797 aa12.76□□□□□ -0.37
PRKCSH-207ENST00000588269 POLR2DO15514 142 aaKnown RBP12.76□□□□□ -0.37
PRKCSH-207ENST00000588269 LDHAP00338 332 aaKnown RBP12.76□□□□□ -0.37
PRKCSH-207ENST00000588269 MYL1P05976 194 aa12.76□□□□□ -0.37
PRKCSH-207ENST00000588269 CYP3A5P20815 502 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms