RNA–Protein interactions for RNA: ENST00000587629.5

SDF2-205, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 775 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-205ENST00000587629 RPA1P27694 616 aa7.06□□□□□ -1.28
SDF2-205ENST00000587629 TKTP29401 623 aaKnown RBP7.06□□□□□ -1.28
SDF2-205ENST00000587629 NAMPTP43490 491 aa7.06□□□□□ -1.28
SDF2-205ENST00000587629 BRCC3P46736 316 aa7.06□□□□□ -1.28
SDF2-205ENST00000587629 CLCNKBP51801 687 aa7.06□□□□□ -1.28
SDF2-205ENST00000587629 ARPP19P56211 112 aa7.06□□□□□ -1.28
SDF2-205ENST00000587629 TTC38Q5R3I4 469 aa7.06□□□□□ -1.28
SDF2-205ENST00000587629 AXDND1Q5T1B0 1012 aaPredicted RBP7.06□□□□□ -1.28
SDF2-205ENST00000587629 ATF7IP2Q5U623 682 aa7.06□□□□□ -1.28
SDF2-205ENST00000587629 FGF13Q92913 245 aa7.06□□□□□ -1.28
SDF2-205ENST00000587629 NXPE3Q969Y0 559 aa7.06□□□□□ -1.28
SDF2-205ENST00000587629 IFT74Q96LB3 600 aa7.06□□□□□ -1.28
SDF2-205ENST00000587629 HINFPQ9BQA5 517 aa7.06□□□□□ -1.28
SDF2-205ENST00000587629 BHMT2Q9H2M3 363 aa7.06□□□□□ -1.28
SDF2-205ENST00000587629 LRWD1Q9UFC0 647 aa7.06□□□□□ -1.28
SDF2-205ENST00000587629 LIMCH1Q9UPQ0 1083 aa7.06□□□□□ -1.28
SDF2-205ENST00000587629 BOLA1Q9Y3E2 137 aa7.06□□□□□ -1.28
SDF2-205ENST00000587629 MTF2Q9Y483 593 aaPredicted RBP7.06□□□□□ -1.28
SDF2-205ENST00000587629 CDY1Q9Y6F8 540 aa7.06□□□□□ -1.28
SDF2-205ENST00000587629 COL4A3Q01955 1670 aa7.06□□□□□ -1.28
SDF2-205ENST00000587629 PTPRZ1P23471 2315 aaPredicted RBP7.05□□□□□ -1.28
SDF2-205ENST00000587629 SMIM28A0A1B0GU29 152 aa7.05□□□□□ -1.28
SDF2-205ENST00000587629 SFI1A8K8P3 1242 aa7.05□□□□□ -1.28
SDF2-205ENST00000587629 PP2D1A8MPX8 630 aa7.05□□□□□ -1.28
SDF2-205ENST00000587629 E9PMD0 336 aa7.05□□□□□ -1.28
SDF2-205ENST00000587629 K7ERI5 159 aa7.05□□□□□ -1.28
SDF2-205ENST00000587629 PAPLNO95428 1278 aa7.05□□□□□ -1.28
SDF2-205ENST00000587629 C1RP00736 705 aa7.05□□□□□ -1.28
SDF2-205ENST00000587629 LMNAP02545 664 aaKnown RBP7.05□□□□□ -1.28
SDF2-205ENST00000587629 HNRNPA1P09651 372 aaKnown RBP eCLIP7.05□□□□□ -1.28
SDF2-205ENST00000587629 SP9P0CG40 484 aa7.05□□□□□ -1.28
SDF2-205ENST00000587629 HARSP12081 509 aaKnown RBP7.05□□□□□ -1.28
SDF2-205ENST00000587629 FGFR3P22607 806 aa7.05□□□□□ -1.28
SDF2-205ENST00000587629 CDC25AP30304 524 aa7.05□□□□□ -1.28
SDF2-205ENST00000587629 ID4P47928 161 aa7.05□□□□□ -1.28
SDF2-205ENST00000587629 EFNA5P52803 228 aa7.05□□□□□ -1.28
SDF2-205ENST00000587629 PEX3P56589 373 aa7.05□□□□□ -1.28
SDF2-205ENST00000587629 RAD51AP2Q09MP3 1159 aa7.05□□□□□ -1.28
SDF2-205ENST00000587629 ELAVL2Q12926 359 aaKnown RBP7.05□□□□□ -1.28
SDF2-205ENST00000587629 RAB33AQ14088 237 aa7.05□□□□□ -1.28
SDF2-205ENST00000587629 UBXN2BQ14CS0 331 aa7.05□□□□□ -1.28
SDF2-205ENST00000587629 PPP2R5AQ15172 486 aa7.05□□□□□ -1.28
SDF2-205ENST00000587629 ZRSR1Q15695 479 aaKnown RBP7.05□□□□□ -1.28
SDF2-205ENST00000587629 UPP1Q16831 310 aa7.05□□□□□ -1.28
SDF2-205ENST00000587629 DCAF4L1Q3SXM0 396 aa7.05□□□□□ -1.28
SDF2-205ENST00000587629 PABPC1LQ4VXU2 614 aaKnown RBP7.05□□□□□ -1.28
SDF2-205ENST00000587629 SLC44A4Q53GD3 710 aa7.05□□□□□ -1.28
SDF2-205ENST00000587629 PHLDB3Q6NSJ2 640 aa7.05□□□□□ -1.28
SDF2-205ENST00000587629 CD300LGQ6UXG3 332 aa7.05□□□□□ -1.28
SDF2-205ENST00000587629 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.05□□□□□ -1.28
SDF2-205ENST00000587629 C1orf210Q8IVY1 113 aa7.05□□□□□ -1.28
SDF2-205ENST00000587629 GPR65Q8IYL9 337 aa7.05□□□□□ -1.28
SDF2-205ENST00000587629 KIAA2013Q8IYS2 634 aa7.05□□□□□ -1.28
SDF2-205ENST00000587629 C4orf32Q8N8J7 132 aa7.05□□□□□ -1.28
SDF2-205ENST00000587629 CEP120Q8N960 986 aa7.05□□□□□ -1.28
SDF2-205ENST00000587629 C3orf58Q8NDZ4 430 aa7.05□□□□□ -1.28
SDF2-205ENST00000587629 PJA1Q8NG27 643 aa7.05□□□□□ -1.28
SDF2-205ENST00000587629 MCRS1Q96EZ8 462 aa7.05□□□□□ -1.28
SDF2-205ENST00000587629 PPP1R10Q96QC0 940 aaKnown RBP7.05□□□□□ -1.28
SDF2-205ENST00000587629 TCHPQ9BT92 498 aa7.05□□□□□ -1.28
SDF2-205ENST00000587629 FOXP1Q9H334 677 aaPredicted RBP7.05□□□□□ -1.28
SDF2-205ENST00000587629 SLC2A4RGQ9NR83 387 aa7.05□□□□□ -1.28
SDF2-205ENST00000587629 DDX19AQ9NUU7 478 aaKnown RBP7.05□□□□□ -1.28
SDF2-205ENST00000587629 DLGAP2Q9P1A6 1054 aa7.05□□□□□ -1.28
SDF2-205ENST00000587629 DNMT3BQ9UBC3 853 aaKnown RBP7.05□□□□□ -1.28
SDF2-205ENST00000587629 MRPS23Q9Y3D9 190 aaKnown RBP7.05□□□□□ -1.28
SDF2-205ENST00000587629 ZMYM2Q9UBW7 1377 aa7.05□□□□□ -1.28
SDF2-205ENST00000587629 KANSL1LA0AUZ9 987 aa7.04□□□□□ -1.28
SDF2-205ENST00000587629 FAM170BA6NMN3 283 aa7.04□□□□□ -1.28
SDF2-205ENST00000587629 PRRG1O14668 218 aa7.04□□□□□ -1.28
SDF2-205ENST00000587629 TRAPPC3O43617 180 aa7.04□□□□□ -1.28
SDF2-205ENST00000587629 HIP1RO75146 1068 aa7.04□□□□□ -1.28
SDF2-205ENST00000587629 RHOP08100 348 aa7.04□□□□□ -1.28
SDF2-205ENST00000587629 NPTX2P47972 431 aa7.04□□□□□ -1.28
SDF2-205ENST00000587629 RBM25P49756 843 aaKnown RBP7.04□□□□□ -1.28
SDF2-205ENST00000587629 YARSP54577 528 aaKnown RBP7.04□□□□□ -1.28
SDF2-205ENST00000587629 SOX4Q06945 474 aaPredicted RBP7.04□□□□□ -1.28
SDF2-205ENST00000587629 PTGDRQ13258 359 aa7.04□□□□□ -1.28
SDF2-205ENST00000587629 SLC5A9Q2M3M2 681 aa7.04□□□□□ -1.28
SDF2-205ENST00000587629 ZNF568Q3ZCX4 644 aa7.04□□□□□ -1.28
SDF2-205ENST00000587629 SEZ6Q53EL9 994 aa7.04□□□□□ -1.28
SDF2-205ENST00000587629 HAUS3Q68CZ6 603 aa7.04□□□□□ -1.28
SDF2-205ENST00000587629 PDXDC1Q6P996 788 aa7.04□□□□□ -1.28
SDF2-205ENST00000587629 MTSS1LQ765P7 747 aa7.04□□□□□ -1.28
SDF2-205ENST00000587629 NPAS3Q8IXF0 933 aa7.04□□□□□ -1.28
SDF2-205ENST00000587629 TMEM130Q8N3G9 435 aa7.04□□□□□ -1.28
SDF2-205ENST00000587629 DCLK2Q8N568 766 aa7.04□□□□□ -1.28
SDF2-205ENST00000587629 FAM184AQ8NB25 1140 aa7.04□□□□□ -1.28
SDF2-205ENST00000587629 FBXO18Q8NFZ0 1043 aa7.04□□□□□ -1.28
SDF2-205ENST00000587629 SNX29Q8TEQ0 813 aa7.04□□□□□ -1.28
SDF2-205ENST00000587629 KIFAP3Q92845 792 aa7.04□□□□□ -1.28
SDF2-205ENST00000587629 C18orf25Q96B23 403 aaPredicted RBP7.04□□□□□ -1.28
SDF2-205ENST00000587629 DDX27Q96GQ7 796 aaKnown RBP7.04□□□□□ -1.28
SDF2-205ENST00000587629 SHDQ96IW2 340 aa7.04□□□□□ -1.28
SDF2-205ENST00000587629 ZMAT2Q96NC0 199 aaKnown RBP7.04□□□□□ -1.28
SDF2-205ENST00000587629 PLIN2Q99541 437 aa7.04□□□□□ -1.28
SDF2-205ENST00000587629 ACO2Q99798 780 aaKnown RBP7.04□□□□□ -1.28
SDF2-205ENST00000587629 RUSC1Q9BVN2 902 aa7.04□□□□□ -1.28
SDF2-205ENST00000587629 CCDC94Q9BW85 323 aaPredicted RBP7.04□□□□□ -1.28
SDF2-205ENST00000587629 TARS2Q9BW92 718 aaKnown RBP7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms