RNA–Protein interactions for RNA: ENST00000587604.1

DNMT1-213, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-213ENST00000587604 RSPO2Q6UXX9 243 aaPredicted RBP15.47■□□□□ 0.07
DNMT1-213ENST00000587604 APBB1IPQ7Z5R6 666 aaPredicted RBP15.47■□□□□ 0.07
DNMT1-213ENST00000587604 KIFAP3Q92845 792 aa15.47■□□□□ 0.07
DNMT1-213ENST00000587604 UROC1Q96N76 676 aa15.47■□□□□ 0.07
DNMT1-213ENST00000587604 PPP1R10Q96QC0 940 aaKnown RBP15.47■□□□□ 0.07
DNMT1-213ENST00000587604 HCFC1R1Q9NWW0 138 aa15.47■□□□□ 0.07
DNMT1-213ENST00000587604 DNMT3BQ9UBC3 853 aaKnown RBP15.47■□□□□ 0.07
DNMT1-213ENST00000587604 CDY1Q9Y6F8 540 aa15.47■□□□□ 0.07
DNMT1-213ENST00000587604 LRRN2O75325 713 aa15.46■□□□□ 0.07
DNMT1-213ENST00000587604 MLF2Q15773 248 aaPredicted RBP15.46■□□□□ 0.07
DNMT1-213ENST00000587604 GLRA4Q5JXX5 417 aa15.46■□□□□ 0.07
DNMT1-213ENST00000587604 HAUS3Q68CZ6 603 aa15.46■□□□□ 0.07
DNMT1-213ENST00000587604 ANKS3Q6ZW76 656 aa15.46■□□□□ 0.07
DNMT1-213ENST00000587604 NPAS3Q8IXF0 933 aa15.46■□□□□ 0.07
DNMT1-213ENST00000587604 MAML2Q8IZL2 1156 aaPredicted RBP15.46■□□□□ 0.07
DNMT1-213ENST00000587604 BORCS6Q96GS4 357 aa15.46■□□□□ 0.07
DNMT1-213ENST00000587604 KIFC3Q9BVG8 833 aa15.46■□□□□ 0.07
DNMT1-213ENST00000587604 BCO2Q9BYV7 579 aa15.46■□□□□ 0.07
DNMT1-213ENST00000587604 OSBPL6Q9BZF3 934 aa15.46■□□□□ 0.07
DNMT1-213ENST00000587604 CITO14578 2027 aa15.45■□□□□ 0.06
DNMT1-213ENST00000587604 SMIM28A0A1B0GU29 152 aa15.45■□□□□ 0.06
DNMT1-213ENST00000587604 K7ERI5 159 aa15.45■□□□□ 0.06
DNMT1-213ENST00000587604 GUCY1B3Q02153 619 aa15.45■□□□□ 0.06
DNMT1-213ENST00000587604 ST3GAL1Q11201 340 aa15.45■□□□□ 0.06
DNMT1-213ENST00000587604 ZNF528Q3MIS6 628 aa15.45■□□□□ 0.06
DNMT1-213ENST00000587604 ZNF461Q8TAF7 563 aa15.45■□□□□ 0.06
DNMT1-213ENST00000587604 RUBCNQ92622 972 aa15.45■□□□□ 0.06
DNMT1-213ENST00000587604 DDX27Q96GQ7 796 aaKnown RBP15.45■□□□□ 0.06
DNMT1-213ENST00000587604 C8orf76Q96K31 380 aa15.45■□□□□ 0.06
DNMT1-213ENST00000587604 KXD1Q9BQD3 176 aa15.45■□□□□ 0.06
DNMT1-213ENST00000587604 BHMT2Q9H2M3 363 aa15.45■□□□□ 0.06
DNMT1-213ENST00000587604 FOXP1Q9H334 677 aaPredicted RBP15.45■□□□□ 0.06
DNMT1-213ENST00000587604 POLD4Q9HCU8 107 aa15.45■□□□□ 0.06
DNMT1-213ENST00000587604 AVENQ9NQS1 362 aaPredicted RBP15.45■□□□□ 0.06
DNMT1-213ENST00000587604 GDE1Q9NZC3 331 aa15.45■□□□□ 0.06
DNMT1-213ENST00000587604 TNFSF13BQ9Y275 285 aa15.45■□□□□ 0.06
DNMT1-213ENST00000587604 MRPS23Q9Y3D9 190 aaKnown RBP15.45■□□□□ 0.06
DNMT1-213ENST00000587604 MTF2Q9Y483 593 aaPredicted RBP15.45■□□□□ 0.06
DNMT1-213ENST00000587604 FAM170BA6NMN3 283 aa15.44■□□□□ 0.06
DNMT1-213ENST00000587604 ECI2O75521 394 aa15.44■□□□□ 0.06
DNMT1-213ENST00000587604 TKTP29401 623 aaKnown RBP15.44■□□□□ 0.06
DNMT1-213ENST00000587604 CCT6AP40227 531 aaKnown RBP15.44■□□□□ 0.06
DNMT1-213ENST00000587604 MAGEA9P43362 315 aa15.44■□□□□ 0.06
DNMT1-213ENST00000587604 FXR2P51116 673 aaKnown RBP eCLIP15.44■□□□□ 0.062e-8■■□□□ 12.8
DNMT1-213ENST00000587604 UBXN2BQ14CS0 331 aa15.44■□□□□ 0.06
DNMT1-213ENST00000587604 ECM1Q16610 540 aa15.44■□□□□ 0.06
DNMT1-213ENST00000587604 XKR4Q5GH76 650 aa15.44■□□□□ 0.06
DNMT1-213ENST00000587604 TTC38Q5R3I4 469 aa15.44■□□□□ 0.06
DNMT1-213ENST00000587604 SLC8B1Q6J4K2 584 aa15.44■□□□□ 0.06
DNMT1-213ENST00000587604 ALKAL1Q6UXT8 129 aa15.44■□□□□ 0.06
DNMT1-213ENST00000587604 KIAA2013Q8IYS2 634 aa15.44■□□□□ 0.06
DNMT1-213ENST00000587604 C3orf58Q8NDZ4 430 aa15.44■□□□□ 0.06
DNMT1-213ENST00000587604 RMDN1Q96DB5 314 aa15.44■□□□□ 0.06
DNMT1-213ENST00000587604 NELL2Q99435 816 aa15.44■□□□□ 0.06
DNMT1-213ENST00000587604 CCDC94Q9BW85 323 aaPredicted RBP15.44■□□□□ 0.06
DNMT1-213ENST00000587604 GOLGA2P5Q9HBQ8 144 aa15.44■□□□□ 0.06
DNMT1-213ENST00000587604 TOPORSQ9NS56 1045 aaPredicted RBP15.44■□□□□ 0.06
DNMT1-213ENST00000587604 SPATA6Q9NWH7 488 aaPredicted RBP15.44■□□□□ 0.06
DNMT1-213ENST00000587604 FBXO4Q9UKT5 387 aa15.44■□□□□ 0.06
DNMT1-213ENST00000587604 KIAA1024Q9UPX6 916 aa15.44■□□□□ 0.06
DNMT1-213ENST00000587604 ARHGEF37A1IGU5 675 aa15.43■□□□□ 0.06
DNMT1-213ENST00000587604 I3L4J1 428 aa15.43■□□□□ 0.06
DNMT1-213ENST00000587604 LAMTOR5O43504 91 aa15.43■□□□□ 0.06
DNMT1-213ENST00000587604 EIF5BO60841 1220 aaKnown RBP15.43■□□□□ 0.06
DNMT1-213ENST00000587604 KINO60870 393 aaKnown RBP15.43■□□□□ 0.06
DNMT1-213ENST00000587604 ABLIM3O94929 683 aa15.43■□□□□ 0.06
DNMT1-213ENST00000587604 RHOP08100 348 aa15.43■□□□□ 0.06
DNMT1-213ENST00000587604 GRM5P41594 1212 aa15.43■□□□□ 0.06
DNMT1-213ENST00000587604 BRCC3P46736 316 aa15.43■□□□□ 0.06
DNMT1-213ENST00000587604 TRAPPC10P48553 1259 aa15.43■□□□□ 0.06
DNMT1-213ENST00000587604 YARSP54577 528 aaKnown RBP15.43■□□□□ 0.06
DNMT1-213ENST00000587604 PDIA5Q14554 519 aa15.43■□□□□ 0.06
DNMT1-213ENST00000587604 ZBTB41Q5SVQ8 909 aa15.43■□□□□ 0.06
DNMT1-213ENST00000587604 C4orf32Q8N8J7 132 aa15.43■□□□□ 0.06
DNMT1-213ENST00000587604 SUMF1Q8NBK3 374 aa15.43■□□□□ 0.06
DNMT1-213ENST00000587604 ING5Q8WYH8 240 aa15.43■□□□□ 0.06
DNMT1-213ENST00000587604 MCRS1Q96EZ8 462 aa15.43■□□□□ 0.06
DNMT1-213ENST00000587604 ACO2Q99798 780 aaKnown RBP15.43■□□□□ 0.06
DNMT1-213ENST00000587604 HINFPQ9BQA5 517 aa15.43■□□□□ 0.06
DNMT1-213ENST00000587604 TMEM134Q9H6X4 195 aa15.43■□□□□ 0.06
DNMT1-213ENST00000587604 PTPRHQ9HD43 1115 aa15.43■□□□□ 0.06
DNMT1-213ENST00000587604 LTB4R2Q9NPC1 389 aa15.43■□□□□ 0.06
DNMT1-213ENST00000587604 SLC38A7Q9NVC3 462 aa15.43■□□□□ 0.06
DNMT1-213ENST00000587604 LRWD1Q9UFC0 647 aa15.43■□□□□ 0.06
DNMT1-213ENST00000587604 LIMCH1Q9UPQ0 1083 aa15.43■□□□□ 0.06
DNMT1-213ENST00000587604 STK24Q9Y6E0 443 aa15.43■□□□□ 0.06
DNMT1-213ENST00000587604 PATJQ8NI35 1801 aa15.43■□□□□ 0.06
DNMT1-213ENST00000587604 COL4A3Q01955 1670 aa15.42■□□□□ 0.06
DNMT1-213ENST00000587604 CCDC169A6NNP5 214 aa15.42■□□□□ 0.06
DNMT1-213ENST00000587604 PTPN2P17706 415 aa15.42■□□□□ 0.06
DNMT1-213ENST00000587604 CD72P21854 359 aa15.42■□□□□ 0.06
DNMT1-213ENST00000587604 ELF1P32519 619 aa15.42■□□□□ 0.06
DNMT1-213ENST00000587604 NPTX2P47972 431 aa15.42■□□□□ 0.06
DNMT1-213ENST00000587604 ROR1Q01973 937 aa15.42■□□□□ 0.06
DNMT1-213ENST00000587604 SOX4Q06945 474 aaPredicted RBP15.42■□□□□ 0.06
DNMT1-213ENST00000587604 SLC5A9Q2M3M2 681 aa15.42■□□□□ 0.06
DNMT1-213ENST00000587604 VARS2Q5ST30 1063 aaKnown RBP15.42■□□□□ 0.06
DNMT1-213ENST00000587604 CEP120Q8N960 986 aa15.42■□□□□ 0.06
DNMT1-213ENST00000587604 FBXO18Q8NFZ0 1043 aa15.42■□□□□ 0.06
DNMT1-213ENST00000587604 CLDN23Q96B33 292 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms