RNA–Protein interactions for RNA: ENST00000586863.5

ATG4D-206, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 4

Gene ATG4D, Length 529 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-206ENST00000586863 HNRNPA1P09651 372 aaKnown RBP eCLIP15.38■□□□□ 0.05
ATG4D-206ENST00000586863 TKTP29401 623 aaKnown RBP15.38■□□□□ 0.05
ATG4D-206ENST00000586863 OR1D2P34982 312 aa15.38■□□□□ 0.05
ATG4D-206ENST00000586863 SOX4Q06945 474 aaPredicted RBP15.38■□□□□ 0.05
ATG4D-206ENST00000586863 DMP1Q13316 513 aaPredicted RBP15.38■□□□□ 0.05
ATG4D-206ENST00000586863 RAB33AQ14088 237 aa15.38■□□□□ 0.05
ATG4D-206ENST00000586863 UPP1Q16831 310 aa15.38■□□□□ 0.05
ATG4D-206ENST00000586863 ZNF568Q3ZCX4 644 aa15.38■□□□□ 0.05
ATG4D-206ENST00000586863 C8orf34Q49A92 452 aa15.38■□□□□ 0.05
ATG4D-206ENST00000586863 PDXDC1Q6P996 788 aa15.38■□□□□ 0.05
ATG4D-206ENST00000586863 DCLRE1AQ6PJP8 1040 aa15.38■□□□□ 0.05
ATG4D-206ENST00000586863 RSPO2Q6UXX9 243 aaPredicted RBP15.38■□□□□ 0.05
ATG4D-206ENST00000586863 DTWD2Q8NBA8 298 aa15.38■□□□□ 0.05
ATG4D-206ENST00000586863 SLC7A14Q8TBB6 771 aa15.38■□□□□ 0.05
ATG4D-206ENST00000586863 ACO2Q99798 780 aaKnown RBP15.38■□□□□ 0.05
ATG4D-206ENST00000586863 MMTAG2Q9BU76 263 aaKnown RBP15.38■□□□□ 0.05
ATG4D-206ENST00000586863 RPP25Q9BUL9 199 aaKnown RBP15.38■□□□□ 0.05
ATG4D-206ENST00000586863 RAB34Q9BZG1 259 aa15.38■□□□□ 0.05
ATG4D-206ENST00000586863 TBC1D17Q9HA65 648 aa15.38■□□□□ 0.05
ATG4D-206ENST00000586863 PTPRHQ9HD43 1115 aa15.38■□□□□ 0.05
ATG4D-206ENST00000586863 ARHGAP28Q9P2N2 729 aa15.38■□□□□ 0.05
ATG4D-206ENST00000586863 MTRRQ9UBK8 725 aa15.38■□□□□ 0.05
ATG4D-206ENST00000586863 DNM3Q9UQ16 869 aa15.38■□□□□ 0.05
ATG4D-206ENST00000586863 COL4A3Q01955 1670 aa15.38■□□□□ 0.05
ATG4D-206ENST00000586863 DMXL1Q9Y485 3027 aa15.38■□□□□ 0.05
ATG4D-206ENST00000586863 CEP250Q9BV73 2442 aa15.37■□□□□ 0.05
ATG4D-206ENST00000586863 SMIM28A0A1B0GU29 152 aa15.37■□□□□ 0.05
ATG4D-206ENST00000586863 ABLIM1O14639 778 aa15.37■□□□□ 0.05
ATG4D-206ENST00000586863 HOXA9P31269 272 aa15.37■□□□□ 0.05
ATG4D-206ENST00000586863 GRM5P41594 1212 aa15.37■□□□□ 0.05
ATG4D-206ENST00000586863 BRCC3P46736 316 aa15.37■□□□□ 0.05
ATG4D-206ENST00000586863 OSTNP61366 133 aa15.37■□□□□ 0.05
ATG4D-206ENST00000586863 ANGPT1Q15389 498 aa15.37■□□□□ 0.05
ATG4D-206ENST00000586863 XKR4Q5GH76 650 aa15.37■□□□□ 0.05
ATG4D-206ENST00000586863 AXDND1Q5T1B0 1012 aaPredicted RBP15.37■□□□□ 0.05
ATG4D-206ENST00000586863 KRT79Q5XKE5 535 aa15.37■□□□□ 0.05
ATG4D-206ENST00000586863 RINT1Q6NUQ1 792 aa15.37■□□□□ 0.05
ATG4D-206ENST00000586863 PARM1Q6UWI2 310 aa15.37■□□□□ 0.05
ATG4D-206ENST00000586863 APBB1IPQ7Z5R6 666 aaPredicted RBP15.37■□□□□ 0.05
ATG4D-206ENST00000586863 ITFG1Q8TB96 612 aa15.37■□□□□ 0.05
ATG4D-206ENST00000586863 FGF14Q92915 247 aa15.37■□□□□ 0.05
ATG4D-206ENST00000586863 DDX27Q96GQ7 796 aaKnown RBP15.37■□□□□ 0.05
ATG4D-206ENST00000586863 UROC1Q96N76 676 aa15.37■□□□□ 0.05
ATG4D-206ENST00000586863 ZMAT2Q96NC0 199 aaKnown RBP15.37■□□□□ 0.05
ATG4D-206ENST00000586863 CCDC94Q9BW85 323 aaPredicted RBP15.37■□□□□ 0.05
ATG4D-206ENST00000586863 TARS2Q9BW92 718 aaKnown RBP15.37■□□□□ 0.05
ATG4D-206ENST00000586863 MRPL4Q9BYD3 311 aaKnown RBP15.37■□□□□ 0.05
ATG4D-206ENST00000586863 TMEM134Q9H6X4 195 aa15.37■□□□□ 0.05
ATG4D-206ENST00000586863 ARHGEF3Q9NR81 526 aa15.37■□□□□ 0.05
ATG4D-206ENST00000586863 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.37■□□□□ 0.05
ATG4D-206ENST00000586863 HCFC1R1Q9NWW0 138 aa15.37■□□□□ 0.05
ATG4D-206ENST00000586863 CDH7Q9ULB5 785 aa15.37■□□□□ 0.05
ATG4D-206ENST00000586863 POLIQ9UNA4 740 aa15.37■□□□□ 0.05
ATG4D-206ENST00000586863 STK24Q9Y6E0 443 aa15.37■□□□□ 0.05
ATG4D-206ENST00000586863 CDY1Q9Y6F8 540 aa15.37■□□□□ 0.05
ATG4D-206ENST00000586863 FANCMQ8IYD8 2048 aa15.36■□□□□ 0.05
ATG4D-206ENST00000586863 STK25O00506 426 aa15.36■□□□□ 0.05
ATG4D-206ENST00000586863 LAD1O00515 517 aa15.36■□□□□ 0.05
ATG4D-206ENST00000586863 MEFVO15553 781 aaPredicted RBP15.36■□□□□ 0.05
ATG4D-206ENST00000586863 POU2F2P09086 479 aa15.36■□□□□ 0.05
ATG4D-206ENST00000586863 RFX1P22670 979 aa15.36■□□□□ 0.05
ATG4D-206ENST00000586863 PROZP22891 400 aa15.36■□□□□ 0.05
ATG4D-206ENST00000586863 PRPHP41219 470 aa15.36■□□□□ 0.05
ATG4D-206ENST00000586863 ALKAL1Q6UXT8 129 aa15.36■□□□□ 0.05
ATG4D-206ENST00000586863 C1orf186Q6ZWK4 172 aa15.36■□□□□ 0.05
ATG4D-206ENST00000586863 FGF13Q92913 245 aa15.36■□□□□ 0.05
ATG4D-206ENST00000586863 SNX27Q96L92 541 aa15.36■□□□□ 0.05
ATG4D-206ENST00000586863 DRC1Q96MC2 740 aa15.36■□□□□ 0.05
ATG4D-206ENST00000586863 KMT5AQ9NQR1 393 aa15.36■□□□□ 0.05
ATG4D-206ENST00000586863 SLC2A4RGQ9NR83 387 aa15.36■□□□□ 0.05
ATG4D-206ENST00000586863 BACE2Q9Y5Z0 518 aa15.36■□□□□ 0.05
ATG4D-206ENST00000586863 ZFP37Q9Y6Q3 630 aaPredicted RBP15.36■□□□□ 0.05
ATG4D-206ENST00000586863 SFI1A8K8P3 1242 aa15.35■□□□□ 0.05
ATG4D-206ENST00000586863 SLC16A4O15374 487 aa15.35■□□□□ 0.05
ATG4D-206ENST00000586863 XYLBO75191 536 aa15.35■□□□□ 0.05
ATG4D-206ENST00000586863 HARSP12081 509 aaKnown RBP15.35■□□□□ 0.05
ATG4D-206ENST00000586863 YARSP54577 528 aaKnown RBP15.35■□□□□ 0.05
ATG4D-206ENST00000586863 ZRSR1Q15695 479 aaKnown RBP15.35■□□□□ 0.05
ATG4D-206ENST00000586863 DTHD1Q6ZMT9 781 aa15.35■□□□□ 0.05
ATG4D-206ENST00000586863 TOPORSQ9NS56 1045 aaPredicted RBP15.35■□□□□ 0.05
ATG4D-206ENST00000586863 DAXXQ9UER7 740 aaPredicted RBP15.35■□□□□ 0.05
ATG4D-206ENST00000586863 DNAH14Q0VDD8 3507 aa15.35■□□□□ 0.05
ATG4D-206ENST00000586863 CACNA1AO00555 2505 aa15.35■□□□□ 0.05
ATG4D-206ENST00000586863 PODXLO00592 558 aa15.34■□□□□ 0.05
ATG4D-206ENST00000586863 DCNP07585 359 aaKnown RBP15.34■□□□□ 0.05
ATG4D-206ENST00000586863 MCF2P10911 925 aa15.34■□□□□ 0.05
ATG4D-206ENST00000586863 GPC5P78333 572 aa15.34■□□□□ 0.05
ATG4D-206ENST00000586863 ROR1Q01973 937 aa15.34■□□□□ 0.05
ATG4D-206ENST00000586863 RAD51AP2Q09MP3 1159 aa15.34■□□□□ 0.05
ATG4D-206ENST00000586863 UVSSAQ2YD98 709 aa15.34■□□□□ 0.05
ATG4D-206ENST00000586863 PABPC1LQ4VXU2 614 aaKnown RBP15.34■□□□□ 0.05
ATG4D-206ENST00000586863 VARS2Q5ST30 1063 aaKnown RBP15.34■□□□□ 0.05
ATG4D-206ENST00000586863 MCTP1Q6DN14 999 aa15.34■□□□□ 0.05
ATG4D-206ENST00000586863 PHLDB3Q6NSJ2 640 aa15.34■□□□□ 0.05
ATG4D-206ENST00000586863 MPZL3Q6UWV2 235 aa15.34■□□□□ 0.05
ATG4D-206ENST00000586863 ANKS3Q6ZW76 656 aa15.34■□□□□ 0.05
ATG4D-206ENST00000586863 NPAS3Q8IXF0 933 aa15.34■□□□□ 0.05
ATG4D-206ENST00000586863 NKD2Q969F2 451 aaPredicted RBP15.34■□□□□ 0.05
ATG4D-206ENST00000586863 C18orf25Q96B23 403 aaPredicted RBP15.34■□□□□ 0.05
ATG4D-206ENST00000586863 ZBTB45Q96K62 511 aaPredicted RBP15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms