RNA–Protein interactions for RNA: ENST00000585953.5

RPRD1A-204, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

TSL 3

Gene RPRD1A, Length 2,357 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-204ENST00000585953 RSPH3Q86UC2 560 aa3.21□□□□□ -1.9
RPRD1A-204ENST00000585953 MAGEB6Q8N7X4 407 aa3.21□□□□□ -1.9
RPRD1A-204ENST00000585953 ATXN2LQ8WWM7 1075 aaKnown RBP3.21□□□□□ -1.9
RPRD1A-204ENST00000585953 CLPTM1LQ96KA5 538 aa3.21□□□□□ -1.9
RPRD1A-204ENST00000585953 SORCS2Q96PQ0 1159 aa3.21□□□□□ -1.9
RPRD1A-204ENST00000585953 SLC23A1Q9UHI7 598 aa3.21□□□□□ -1.9
RPRD1A-204ENST00000585953 HDAC5Q9UQL6 1122 aa3.21□□□□□ -1.9
RPRD1A-204ENST00000585953 RUVBL1Q9Y265 456 aaKnown RBP3.21□□□□□ -1.9
RPRD1A-204ENST00000585953 SNAPC4Q5SXM2 1469 aa3.21□□□□□ -1.9
RPRD1A-204ENST00000585953 KLRG2A4D1S0 409 aaPredicted RBP3.2□□□□□ -1.9
RPRD1A-204ENST00000585953 MUSKO15146 869 aa3.2□□□□□ -1.9
RPRD1A-204ENST00000585953 CYP27B1O15528 508 aa3.2□□□□□ -1.9
RPRD1A-204ENST00000585953 AP1G1O43747 822 aa3.2□□□□□ -1.9
RPRD1A-204ENST00000585953 RPLP2P05387 115 aaKnown RBP3.2□□□□□ -1.9
RPRD1A-204ENST00000585953 SNRPA1P09661 255 aaKnown RBP3.2□□□□□ -1.9
RPRD1A-204ENST00000585953 ZNF20P17024 532 aa3.2□□□□□ -1.9
RPRD1A-204ENST00000585953 HSPA6P17066 643 aa3.2□□□□□ -1.9
RPRD1A-204ENST00000585953 ATP5JP18859 108 aa3.2□□□□□ -1.9
RPRD1A-204ENST00000585953 HK1P19367 917 aa3.2□□□□□ -1.9
RPRD1A-204ENST00000585953 HIBADHP31937 336 aaKnown RBP3.2□□□□□ -1.9
RPRD1A-204ENST00000585953 CLRN1P58418 232 aa3.2□□□□□ -1.9
RPRD1A-204ENST00000585953 CTXN1P60606 82 aa3.2□□□□□ -1.9
RPRD1A-204ENST00000585953 ADAM17P78536 824 aa3.2□□□□□ -1.9
RPRD1A-204ENST00000585953 RAB39AQ14964 217 aa3.2□□□□□ -1.9
RPRD1A-204ENST00000585953 METTL24Q5JXM2 366 aa3.2□□□□□ -1.9
RPRD1A-204ENST00000585953 B3GNT9Q6UX72 402 aa3.2□□□□□ -1.9
RPRD1A-204ENST00000585953 HTR3DQ70Z44 454 aa3.2□□□□□ -1.9
RPRD1A-204ENST00000585953 PLXDC1Q8IUK5 500 aa3.2□□□□□ -1.9
RPRD1A-204ENST00000585953 GRAMD1CQ8IYS0 662 aa3.2□□□□□ -1.9
RPRD1A-204ENST00000585953 DCBLD1Q8N8Z6 715 aa3.2□□□□□ -1.9
RPRD1A-204ENST00000585953 DVL3Q92997 716 aaPredicted RBP3.2□□□□□ -1.9
RPRD1A-204ENST00000585953 CLIP3Q96DZ5 547 aa3.2□□□□□ -1.9
RPRD1A-204ENST00000585953 MAP3K14Q99558 947 aa3.2□□□□□ -1.9
RPRD1A-204ENST00000585953 MYOCQ99972 504 aa3.2□□□□□ -1.9
RPRD1A-204ENST00000585953 MRI1Q9BV20 369 aa3.2□□□□□ -1.9
RPRD1A-204ENST00000585953 C1QTNF3Q9BXJ4 246 aa3.2□□□□□ -1.9
RPRD1A-204ENST00000585953 CHPF2Q9P2E5 772 aa3.2□□□□□ -1.9
RPRD1A-204ENST00000585953 PNPLA7Q6ZV29 1317 aa3.2□□□□□ -1.9
RPRD1A-204ENST00000585953 LRRC14BA6NHZ5 514 aa3.2□□□□□ -1.9
RPRD1A-204ENST00000585953 PRR5-ARHGAP8B1AHC4 643 aa3.2□□□□□ -1.9
RPRD1A-204ENST00000585953 HMGB1P09429 215 aaKnown RBP3.2□□□□□ -1.9
RPRD1A-204ENST00000585953 U2AF1L5P0DN76 240 aaPredicted RBP3.2□□□□□ -1.9
RPRD1A-204ENST00000585953 SCNN1GP51170 649 aa3.2□□□□□ -1.9
RPRD1A-204ENST00000585953 ZNF280AP59817 542 aaPredicted RBP3.2□□□□□ -1.9
RPRD1A-204ENST00000585953 U2AF1Q01081 240 aaKnown RBP eCLIP3.2□□□□□ -1.91e-6■■■□□ 15.4
RPRD1A-204ENST00000585953 TLE1Q04724 770 aa3.2□□□□□ -1.9
RPRD1A-204ENST00000585953 MLC1Q15049 377 aa3.2□□□□□ -1.9
RPRD1A-204ENST00000585953 PRKD1Q15139 912 aaPredicted RBP3.2□□□□□ -1.9
RPRD1A-204ENST00000585953 CDSNQ15517 529 aa3.2□□□□□ -1.9
RPRD1A-204ENST00000585953 VPS72Q15906 364 aa3.2□□□□□ -1.9
RPRD1A-204ENST00000585953 NAIF1Q69YI7 327 aaPredicted RBP3.2□□□□□ -1.9
RPRD1A-204ENST00000585953 SEM1Q6ZVN7 128 aa3.2□□□□□ -1.9
RPRD1A-204ENST00000585953 PALM2Q8IXS6 379 aa3.2□□□□□ -1.9
RPRD1A-204ENST00000585953 GSPT2Q8IYD1 628 aaKnown RBP3.2□□□□□ -1.9
RPRD1A-204ENST00000585953 MYO1HQ8N1T3 1032 aa3.2□□□□□ -1.9
RPRD1A-204ENST00000585953 RNF169Q8NCN4 708 aa3.2□□□□□ -1.9
RPRD1A-204ENST00000585953 DIS3LQ8TF46 1054 aaKnown RBP3.2□□□□□ -1.9
RPRD1A-204ENST00000585953 TFAP2CQ92754 450 aa3.2□□□□□ -1.9
RPRD1A-204ENST00000585953 RGMAQ96B86 450 aa3.2□□□□□ -1.9
RPRD1A-204ENST00000585953 PGBD4Q96DM1 585 aa3.2□□□□□ -1.9
RPRD1A-204ENST00000585953 TAAR9Q96RI9 348 aa3.2□□□□□ -1.9
RPRD1A-204ENST00000585953 GPR87Q9BY21 358 aa3.2□□□□□ -1.9
RPRD1A-204ENST00000585953 CALCOCO1Q9P1Z2 691 aa3.2□□□□□ -1.9
RPRD1A-204ENST00000585953 KRTAP23-1A1A580 65 aa3.19□□□□□ -1.9
RPRD1A-204ENST00000585953 ACRV1P26436 265 aa3.19□□□□□ -1.9
RPRD1A-204ENST00000585953 MAN2A2P49641 1150 aa3.19□□□□□ -1.9
RPRD1A-204ENST00000585953 RAP2BP61225 183 aa3.19□□□□□ -1.9
RPRD1A-204ENST00000585953 DACT2Q5SW24 774 aa3.19□□□□□ -1.9
RPRD1A-204ENST00000585953 ZNF529Q6P280 563 aa3.19□□□□□ -1.9
RPRD1A-204ENST00000585953 DRICH1Q6PGQ1 229 aaPredicted RBP3.19□□□□□ -1.9
RPRD1A-204ENST00000585953 GADL1Q6ZQY3 521 aa3.19□□□□□ -1.9
RPRD1A-204ENST00000585953 SLC16A11Q8NCK7 471 aa3.19□□□□□ -1.9
RPRD1A-204ENST00000585953 OR10H5Q8NGA6 315 aa3.19□□□□□ -1.9
RPRD1A-204ENST00000585953 ZFP28Q8NHY6 868 aa3.19□□□□□ -1.9
RPRD1A-204ENST00000585953 SLC35G2Q8TBE7 412 aa3.19□□□□□ -1.9
RPRD1A-204ENST00000585953 MNTQ99583 582 aa3.19□□□□□ -1.9
RPRD1A-204ENST00000585953 VRK1Q99986 396 aaPredicted RBP3.19□□□□□ -1.9
RPRD1A-204ENST00000585953 C11orf54Q9H0W9 315 aaPredicted RBP3.19□□□□□ -1.9
RPRD1A-204ENST00000585953 WDR26Q9H7D7 661 aa3.19□□□□□ -1.9
RPRD1A-204ENST00000585953 SPON1Q9HCB6 807 aa3.19□□□□□ -1.9
RPRD1A-204ENST00000585953 CLCA2Q9UQC9 943 aa3.19□□□□□ -1.9
RPRD1A-204ENST00000585953 GOLGA6L6A8MZA4 724 aa3.19□□□□□ -1.9
RPRD1A-204ENST00000585953 SLC16A6O15403 523 aa3.19□□□□□ -1.9
RPRD1A-204ENST00000585953 FTLP02792 175 aaPredicted RBP3.19□□□□□ -1.9
RPRD1A-204ENST00000585953 MAP2K6P52564 334 aa3.19□□□□□ -1.9
RPRD1A-204ENST00000585953 NOGQ13253 232 aa3.19□□□□□ -1.9
RPRD1A-204ENST00000585953 CRHR2Q13324 411 aa3.19□□□□□ -1.9
RPRD1A-204ENST00000585953 RRP1BQ14684 758 aaKnown RBP3.19□□□□□ -1.9
RPRD1A-204ENST00000585953 KHDC1Q4VXA5 237 aaKnown RBP3.19□□□□□ -1.9
RPRD1A-204ENST00000585953 ATXN7L2Q5T6C5 722 aaPredicted RBP3.19□□□□□ -1.9
RPRD1A-204ENST00000585953 THEMIS2Q5TEJ8 643 aa3.19□□□□□ -1.9
RPRD1A-204ENST00000585953 EFCAB12Q6NXP0 572 aa3.19□□□□□ -1.9
RPRD1A-204ENST00000585953 SYT12Q8IV01 421 aa3.19□□□□□ -1.9
RPRD1A-204ENST00000585953 WDR75Q8IWA0 830 aaKnown RBP3.19□□□□□ -1.9
RPRD1A-204ENST00000585953 C3orf20Q8ND61 904 aa3.19□□□□□ -1.9
RPRD1A-204ENST00000585953 RUNDC1Q96C34 613 aa3.19□□□□□ -1.9
RPRD1A-204ENST00000585953 C1GALT1C1Q96EU7 318 aa3.19□□□□□ -1.9
RPRD1A-204ENST00000585953 CDK5RAP1Q96SZ6 601 aaKnown RBP3.19□□□□□ -1.9
RPRD1A-204ENST00000585953 TSC22D4Q9Y3Q8 395 aa3.19□□□□□ -1.9
RPRD1A-204ENST00000585953 TESMINQ9Y4I5 508 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms