RNA–Protein interactions for RNA: ENST00000585335.1

SCAMP4-209, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 5

Gene SCAMP4, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-209ENST00000585335 ALDH2P05091 517 aa15.81■□□□□ 0.12
SCAMP4-209ENST00000585335 TMEM191BP0C7N4 346 aa15.81■□□□□ 0.12
SCAMP4-209ENST00000585335 CTNNB1P35222 781 aa15.81■□□□□ 0.12
SCAMP4-209ENST00000585335 PPM1AP35813 382 aa15.81■□□□□ 0.12
SCAMP4-209ENST00000585335 AFF1P51825 1210 aaKnown RBP15.81■□□□□ 0.12
SCAMP4-209ENST00000585335 CCDC40Q4G0X9 1142 aa15.81■□□□□ 0.12
SCAMP4-209ENST00000585335 JADE1Q6IE81 842 aa15.81■□□□□ 0.12
SCAMP4-209ENST00000585335 ZC3H3Q8IXZ2 948 aaKnown RBP15.81■□□□□ 0.12
SCAMP4-209ENST00000585335 GSTCDQ8NEC7 633 aa15.81■□□□□ 0.12
SCAMP4-209ENST00000585335 CLP1Q92989 425 aaKnown RBP15.81■□□□□ 0.12
SCAMP4-209ENST00000585335 DDX27Q96GQ7 796 aaKnown RBP15.81■□□□□ 0.12
SCAMP4-209ENST00000585335 ANKRD36BP1Q96IX9 119 aa15.81■□□□□ 0.12
SCAMP4-209ENST00000585335 MFSD14AQ96MC6 490 aa15.81■□□□□ 0.12
SCAMP4-209ENST00000585335 PLVAPQ9BX97 442 aa15.81■□□□□ 0.12
SCAMP4-209ENST00000585335 CWH43Q9H720 699 aa15.81■□□□□ 0.12
SCAMP4-209ENST00000585335 NRDE2Q9H7Z3 1164 aa15.81■□□□□ 0.12
SCAMP4-209ENST00000585335 PDE11AQ9HCR9 933 aa15.81■□□□□ 0.12
SCAMP4-209ENST00000585335 MIOSQ9NXC5 875 aa15.81■□□□□ 0.12
SCAMP4-209ENST00000585335 R3HCC1Q9Y3T6 440 aaKnown RBP15.81■□□□□ 0.12
SCAMP4-209ENST00000585335 TDRD15B5MCY1 1934 aaKnown RBP15.8■□□□□ 0.12
SCAMP4-209ENST00000585335 GBF1Q92538 1859 aa15.8■□□□□ 0.12
SCAMP4-209ENST00000585335 STX10O60499 249 aa15.8■□□□□ 0.12
SCAMP4-209ENST00000585335 AKAP3O75969 853 aa15.8■□□□□ 0.12
SCAMP4-209ENST00000585335 TNNC2P02585 160 aa15.8■□□□□ 0.12
SCAMP4-209ENST00000585335 NFICP08651 508 aa15.8■□□□□ 0.12
SCAMP4-209ENST00000585335 DLATP10515 647 aaKnown RBP15.8■□□□□ 0.12
SCAMP4-209ENST00000585335 TNNI1P19237 187 aa15.8■□□□□ 0.12
SCAMP4-209ENST00000585335 CYP3A5P20815 502 aa15.8■□□□□ 0.12
SCAMP4-209ENST00000585335 RPL9P32969 192 aaKnown RBP15.8■□□□□ 0.12
SCAMP4-209ENST00000585335 OR1G1P47890 313 aa15.8■□□□□ 0.12
SCAMP4-209ENST00000585335 CASP4P49662 377 aa15.8■□□□□ 0.12
SCAMP4-209ENST00000585335 AP3M2P53677 418 aa15.8■□□□□ 0.12
SCAMP4-209ENST00000585335 BCAR1P56945 870 aa15.8■□□□□ 0.12
SCAMP4-209ENST00000585335 TFAMQ00059 246 aaKnown RBP15.8■□□□□ 0.12
SCAMP4-209ENST00000585335 TAP1Q03518 808 aa15.8■□□□□ 0.12
SCAMP4-209ENST00000585335 ENPEPQ07075 957 aa15.8■□□□□ 0.12
SCAMP4-209ENST00000585335 DSC1Q08554 894 aa15.8■□□□□ 0.12
SCAMP4-209ENST00000585335 KCNT2Q6UVM3 1135 aa15.8■□□□□ 0.12
SCAMP4-209ENST00000585335 LRRC55Q6ZSA7 311 aa15.8■□□□□ 0.12
SCAMP4-209ENST00000585335 FILIP1Q7Z7B0 1213 aa15.8■□□□□ 0.12
SCAMP4-209ENST00000585335 ZNF280BQ86YH2 543 aa15.8■□□□□ 0.12
SCAMP4-209ENST00000585335 WDR49Q8IV35 697 aa15.8■□□□□ 0.12
SCAMP4-209ENST00000585335 FAM114A1Q8IWE2 563 aa15.8■□□□□ 0.12
SCAMP4-209ENST00000585335 COLGALT1Q8NBJ5 622 aa15.8■□□□□ 0.12
SCAMP4-209ENST00000585335 TMC2Q8TDI7 906 aa15.8■□□□□ 0.12
SCAMP4-209ENST00000585335 CCDC127Q96BQ5 260 aa15.8■□□□□ 0.12
SCAMP4-209ENST00000585335 CGRRF1Q99675 332 aa15.8■□□□□ 0.12
SCAMP4-209ENST00000585335 DUSP9Q99956 384 aaKnown RBP15.8■□□□□ 0.12
SCAMP4-209ENST00000585335 C11orf84Q9BUA3 381 aaPredicted RBP15.8■□□□□ 0.12
SCAMP4-209ENST00000585335 COLEC11Q9BWP8 271 aa15.8■□□□□ 0.12
SCAMP4-209ENST00000585335 METTL14Q9HCE5 456 aaKnown RBP15.8■□□□□ 0.12
SCAMP4-209ENST00000585335 ARMCX3Q9UH62 379 aaPredicted RBP15.8■□□□□ 0.12
SCAMP4-209ENST00000585335 PLAGL2Q9UPG8 496 aa15.8■□□□□ 0.12
SCAMP4-209ENST00000585335 FAN1Q9Y2M0 1017 aa15.8■□□□□ 0.12
SCAMP4-209ENST00000585335 CASTOR2A6NHX0 329 aa15.79■□□□□ 0.12
SCAMP4-209ENST00000585335 DDHD2O94830 711 aa15.79■□□□□ 0.12
SCAMP4-209ENST00000585335 CAVIN2O95810 425 aa15.79■□□□□ 0.12
SCAMP4-209ENST00000585335 RB1P06400 928 aa15.79■□□□□ 0.12
SCAMP4-209ENST00000585335 BMPR1AP36894 532 aa15.79■□□□□ 0.12
SCAMP4-209ENST00000585335 VAMP7P51809 220 aa15.79■□□□□ 0.12
SCAMP4-209ENST00000585335 ERVK-21P61565 698 aa15.79■□□□□ 0.12
SCAMP4-209ENST00000585335 SPAG1Q07617 926 aa15.79■□□□□ 0.12
SCAMP4-209ENST00000585335 DUOXA2Q1HG44 320 aa15.79■□□□□ 0.12
SCAMP4-209ENST00000585335 ANO6Q4KMQ2 910 aa15.79■□□□□ 0.12
SCAMP4-209ENST00000585335 HABP4Q5JVS0 413 aaKnown RBP15.79■□□□□ 0.12
SCAMP4-209ENST00000585335 SPATA1Q5VX52 437 aa15.79■□□□□ 0.12
SCAMP4-209ENST00000585335 COLGALT2Q8IYK4 626 aa15.79■□□□□ 0.12
SCAMP4-209ENST00000585335 EEF2KMTQ96G04 330 aa15.79■□□□□ 0.12
SCAMP4-209ENST00000585335 ZMAT2Q96NC0 199 aaKnown RBP15.79■□□□□ 0.12
SCAMP4-209ENST00000585335 SRRTQ9BXP5 876 aaKnown RBP15.79■□□□□ 0.12
SCAMP4-209ENST00000585335 DNAJC25Q9H1X3 360 aa15.79■□□□□ 0.12
SCAMP4-209ENST00000585335 THAP9Q9H5L6 903 aa15.79■□□□□ 0.12
SCAMP4-209ENST00000585335 SPG21Q9NZD8 308 aa15.79■□□□□ 0.12
SCAMP4-209ENST00000585335 MAGEC2Q9UBF1 373 aaPredicted RBP15.79■□□□□ 0.12
SCAMP4-209ENST00000585335 STK39Q9UEW8 545 aa15.79■□□□□ 0.12
SCAMP4-209ENST00000585335 MEFVO15553 781 aaPredicted RBP15.78■□□□□ 0.12
SCAMP4-209ENST00000585335 GALTP07902 379 aa15.78■□□□□ 0.12
SCAMP4-209ENST00000585335 SLC11A1P49279 550 aa15.78■□□□□ 0.12
SCAMP4-209ENST00000585335 KRT17Q04695 432 aa15.78■□□□□ 0.12
SCAMP4-209ENST00000585335 BFSP1Q12934 665 aa15.78■□□□□ 0.12
SCAMP4-209ENST00000585335 ZBTB6Q15916 424 aa15.78■□□□□ 0.12
SCAMP4-209ENST00000585335 ZNF697Q5TEC3 545 aa15.78■□□□□ 0.12
SCAMP4-209ENST00000585335 FRMD5Q7Z6J6 570 aa15.78■□□□□ 0.12
SCAMP4-209ENST00000585335 FBXO22Q8NEZ5 403 aa15.78■□□□□ 0.12
SCAMP4-209ENST00000585335 ENOX1Q8TC92 643 aaKnown RBP15.78■□□□□ 0.12
SCAMP4-209ENST00000585335 PARD3BQ8TEW8 1205 aa15.78■□□□□ 0.12
SCAMP4-209ENST00000585335 C18orf25Q96B23 403 aaPredicted RBP15.78■□□□□ 0.12
SCAMP4-209ENST00000585335 TMEM169Q96HH4 297 aa15.78■□□□□ 0.12
SCAMP4-209ENST00000585335 GZF1Q9H116 711 aaPredicted RBP15.78■□□□□ 0.12
SCAMP4-209ENST00000585335 CXCL16Q9H2A7 254 aa15.78■□□□□ 0.12
SCAMP4-209ENST00000585335 INTS13Q9NVM9 706 aa15.78■□□□□ 0.12
SCAMP4-209ENST00000585335 DPP3Q9NY33 737 aa15.78■□□□□ 0.12
SCAMP4-209ENST00000585335 HCSTQ9UBK5 93 aa15.78■□□□□ 0.12
SCAMP4-209ENST00000585335 DNAJB4Q9UDY4 337 aa15.78■□□□□ 0.12
SCAMP4-209ENST00000585335 TUBGCP4Q9UGJ1 667 aa15.78■□□□□ 0.12
SCAMP4-209ENST00000585335 ITGA11Q9UKX5 1188 aa15.78■□□□□ 0.12
SCAMP4-209ENST00000585335 MTUS1Q9ULD2 1270 aa15.78■□□□□ 0.12
SCAMP4-209ENST00000585335 PRG3Q9Y2Y8 225 aaPredicted RBP15.78■□□□□ 0.12
SCAMP4-209ENST00000585335 SMTNL1A8MU46 457 aa15.77■□□□□ 0.12
SCAMP4-209ENST00000585335 PODXLO00592 558 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms