RNA–Protein interactions for RNA: ENST00000583988.1

PPP4R1-227, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-227ENST00000583988 CPPED1Q9BRF8 314 aaPredicted RBP5.14□□□□□ -1.59
PPP4R1-227ENST00000583988 NRDE2Q9H7Z3 1164 aa5.14□□□□□ -1.59
PPP4R1-227ENST00000583988 NMRK2Q9NPI5 230 aa5.14□□□□□ -1.59
PPP4R1-227ENST00000583988 FAM30AQ9NZY2 134 aa5.14□□□□□ -1.59
PPP4R1-227ENST00000583988 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.14□□□□□ -1.59
PPP4R1-227ENST00000583988 CLCA2Q9UQC9 943 aa5.14□□□□□ -1.59
PPP4R1-227ENST00000583988 TBKBP1A7MCY6 615 aa5.13□□□□□ -1.59
PPP4R1-227ENST00000583988 WNT10BO00744 389 aa5.13□□□□□ -1.59
PPP4R1-227ENST00000583988 KIF3BO15066 747 aa5.13□□□□□ -1.59
PPP4R1-227ENST00000583988 MARCH6O60337 910 aa5.13□□□□□ -1.59
PPP4R1-227ENST00000583988 OFD1O75665 1012 aa5.13□□□□□ -1.59
PPP4R1-227ENST00000583988 ARIH2O95376 493 aa5.13□□□□□ -1.59
PPP4R1-227ENST00000583988 ALOX15P16050 662 aaPredicted RBP5.13□□□□□ -1.59
PPP4R1-227ENST00000583988 LPOP22079 712 aaPredicted RBP5.13□□□□□ -1.59
PPP4R1-227ENST00000583988 FLT3LGP49771 235 aa5.13□□□□□ -1.59
PPP4R1-227ENST00000583988 INHBCP55103 352 aa5.13□□□□□ -1.59
PPP4R1-227ENST00000583988 CDC42EP1Q00587 391 aa5.13□□□□□ -1.59
PPP4R1-227ENST00000583988 MLC1Q15049 377 aa5.13□□□□□ -1.59
PPP4R1-227ENST00000583988 BMT2Q1RMZ1 405 aa5.13□□□□□ -1.59
PPP4R1-227ENST00000583988 GFOD2Q3B7J2 385 aa5.13□□□□□ -1.59
PPP4R1-227ENST00000583988 C1QL3Q5VWW1 255 aa5.13□□□□□ -1.59
PPP4R1-227ENST00000583988 HTR3DQ70Z44 454 aa5.13□□□□□ -1.59
PPP4R1-227ENST00000583988 SLC25A43Q8WUT9 341 aaPredicted RBP5.13□□□□□ -1.59
PPP4R1-227ENST00000583988 HPS3Q969F9 1004 aa5.13□□□□□ -1.59
PPP4R1-227ENST00000583988 C1GALT1C1Q96EU7 318 aa5.13□□□□□ -1.59
PPP4R1-227ENST00000583988 LSM14BQ9BX40 385 aaKnown RBP5.13□□□□□ -1.59
PPP4R1-227ENST00000583988 KCNH6Q9H252 994 aa5.13□□□□□ -1.59
PPP4R1-227ENST00000583988 LANCL2Q9NS86 450 aa5.13□□□□□ -1.59
PPP4R1-227ENST00000583988 TMEM140Q9NV12 185 aa5.13□□□□□ -1.59
PPP4R1-227ENST00000583988 MOCS1Q9NZB8 636 aa5.13□□□□□ -1.59
PPP4R1-227ENST00000583988 CALCOCO1Q9P1Z2 691 aa5.13□□□□□ -1.59
PPP4R1-227ENST00000583988 SERPINB13Q9UIV8 391 aa5.13□□□□□ -1.59
PPP4R1-227ENST00000583988 SORCS3Q9UPU3 1222 aa5.13□□□□□ -1.59
PPP4R1-227ENST00000583988 POLHQ9Y253 713 aa5.13□□□□□ -1.59
PPP4R1-227ENST00000583988 A0A087X1B8 175 aa5.12□□□□□ -1.59
PPP4R1-227ENST00000583988 CCDC154A6NI56 674 aa5.12□□□□□ -1.59
PPP4R1-227ENST00000583988 B5MCH6 92 aa5.12□□□□□ -1.59
PPP4R1-227ENST00000583988 PJA2O43164 708 aa5.12□□□□□ -1.59
PPP4R1-227ENST00000583988 PEX11BO96011 259 aa5.12□□□□□ -1.59
PPP4R1-227ENST00000583988 IL12RB1P42701 662 aa5.12□□□□□ -1.59
PPP4R1-227ENST00000583988 UAP1L1Q3KQV9 507 aa5.12□□□□□ -1.59
PPP4R1-227ENST00000583988 ANKS6Q68DC2 871 aa5.12□□□□□ -1.59
PPP4R1-227ENST00000583988 NAIF1Q69YI7 327 aaPredicted RBP5.12□□□□□ -1.59
PPP4R1-227ENST00000583988 DRICH1Q6PGQ1 229 aaPredicted RBP5.12□□□□□ -1.59
PPP4R1-227ENST00000583988 XYLT1Q86Y38 959 aa5.12□□□□□ -1.59
PPP4R1-227ENST00000583988 LDLRAD3Q86YD5 345 aa5.12□□□□□ -1.59
PPP4R1-227ENST00000583988 ZNF276Q8N554 614 aa5.12□□□□□ -1.59
PPP4R1-227ENST00000583988 OR52N2Q8NGI0 321 aa5.12□□□□□ -1.59
PPP4R1-227ENST00000583988 SLC35G2Q8TBE7 412 aa5.12□□□□□ -1.59
PPP4R1-227ENST00000583988 CPT1CQ8TCG5 803 aa5.12□□□□□ -1.59
PPP4R1-227ENST00000583988 STON2Q8WXE9 905 aa5.12□□□□□ -1.59
PPP4R1-227ENST00000583988 CCDC136Q96JN2 1154 aa5.12□□□□□ -1.59
PPP4R1-227ENST00000583988 UHRF1Q96T88 793 aaPredicted RBP5.12□□□□□ -1.59
PPP4R1-227ENST00000583988 SLC12A5Q9H2X9 1139 aa5.12□□□□□ -1.59
PPP4R1-227ENST00000583988 MAN1C1Q9NR34 630 aa5.12□□□□□ -1.59
PPP4R1-227ENST00000583988 GPRC5BQ9NZH0 403 aa5.12□□□□□ -1.59
PPP4R1-227ENST00000583988 C11orf21Q9P2W6 132 aa5.12□□□□□ -1.59
PPP4R1-227ENST00000583988 HDAC5Q9UQL6 1122 aa5.12□□□□□ -1.59
PPP4R1-227ENST00000583988 PCDHA13Q9Y5I0 950 aa5.12□□□□□ -1.59
PPP4R1-227ENST00000583988 AMY1AP04745 511 aa5.11□□□□□ -1.59
PPP4R1-227ENST00000583988 PTGS2P35354 604 aa5.11□□□□□ -1.59
PPP4R1-227ENST00000583988 ATP8B2P98198 1209 aa5.11□□□□□ -1.59
PPP4R1-227ENST00000583988 RAB39AQ14964 217 aa5.11□□□□□ -1.59
PPP4R1-227ENST00000583988 LRRC41Q15345 812 aa5.11□□□□□ -1.59
PPP4R1-227ENST00000583988 CSRP2Q16527 193 aa5.11□□□□□ -1.59
PPP4R1-227ENST00000583988 PGS1Q32NB8 556 aa5.11□□□□□ -1.59
PPP4R1-227ENST00000583988 DCAF17Q5H9S7 520 aaPredicted RBP5.11□□□□□ -1.59
PPP4R1-227ENST00000583988 IFIT1BQ5T764 474 aaKnown RBP5.11□□□□□ -1.59
PPP4R1-227ENST00000583988 OTUD7BQ6GQQ9 843 aa5.11□□□□□ -1.59
PPP4R1-227ENST00000583988 B3GNT9Q6UX72 402 aa5.11□□□□□ -1.59
PPP4R1-227ENST00000583988 EPM2AIP1Q7L775 607 aaPredicted RBP5.11□□□□□ -1.59
PPP4R1-227ENST00000583988 MRGPRGQ86SM5 289 aa5.11□□□□□ -1.59
PPP4R1-227ENST00000583988 TPH2Q8IWU9 490 aa5.11□□□□□ -1.59
PPP4R1-227ENST00000583988 RHOT1Q8IXI2 618 aa5.11□□□□□ -1.59
PPP4R1-227ENST00000583988 SLC35B2Q8TB61 432 aa5.11□□□□□ -1.59
PPP4R1-227ENST00000583988 CCHCR1Q8TD31 782 aa5.11□□□□□ -1.59
PPP4R1-227ENST00000583988 NSUN6Q8TEA1 469 aaKnown RBP5.11□□□□□ -1.59
PPP4R1-227ENST00000583988 HAS1Q92839 578 aa5.11□□□□□ -1.59
PPP4R1-227ENST00000583988 MVB12AQ96EY5 273 aa5.11□□□□□ -1.59
PPP4R1-227ENST00000583988 FAM193BQ96PV7 902 aaPredicted RBP5.11□□□□□ -1.59
PPP4R1-227ENST00000583988 MAP3K14Q99558 947 aa5.11□□□□□ -1.59
PPP4R1-227ENST00000583988 TTPALQ9BTX7 342 aa5.11□□□□□ -1.59
PPP4R1-227ENST00000583988 CPEB1Q9BZB8 566 aaKnown RBP5.11□□□□□ -1.59
PPP4R1-227ENST00000583988 GTPBP4Q9BZE4 634 aaKnown RBP5.11□□□□□ -1.59
PPP4R1-227ENST00000583988 SENP6Q9GZR1 1112 aaPredicted RBP5.11□□□□□ -1.59
PPP4R1-227ENST00000583988 KMT5AQ9NQR1 393 aa5.11□□□□□ -1.59
PPP4R1-227ENST00000583988 TDP1Q9NUW8 608 aa5.11□□□□□ -1.59
PPP4R1-227ENST00000583988 AJAP1Q9UKB5 411 aaPredicted RBP5.11□□□□□ -1.59
PPP4R1-227ENST00000583988 PCDHB1Q9Y5F3 818 aa5.11□□□□□ -1.59
PPP4R1-227ENST00000583988 PNPLA7Q6ZV29 1317 aa5.11□□□□□ -1.59
PPP4R1-227ENST00000583988 CXorf49A8MYA2 514 aaPredicted RBP5.1□□□□□ -1.59
PPP4R1-227ENST00000583988 SCAF4O95104 1147 aaKnown RBP5.1□□□□□ -1.59
PPP4R1-227ENST00000583988 PCSK1P29120 753 aa5.1□□□□□ -1.59
PPP4R1-227ENST00000583988 FXR1P51114 621 aaKnown RBP eCLIP5.1□□□□□ -1.59
PPP4R1-227ENST00000583988 CLRN1P58418 232 aa5.1□□□□□ -1.59
PPP4R1-227ENST00000583988 DSC2Q02487 901 aa5.1□□□□□ -1.59
PPP4R1-227ENST00000583988 FSTL1Q12841 308 aa5.1□□□□□ -1.59
PPP4R1-227ENST00000583988 IL10RAQ13651 578 aa5.1□□□□□ -1.59
PPP4R1-227ENST00000583988 VPS72Q15906 364 aa5.1□□□□□ -1.59
PPP4R1-227ENST00000583988 ATP2B3Q16720 1220 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms