RNA–Protein interactions for RNA: ENST00000583804.2

TOP3A-216, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 1,465 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-216ENST00000583804 PLEKHA5Q9HAU0 1116 aa11.88□□□□□ -0.51
TOP3A-216ENST00000583804 PDE11AQ9HCR9 933 aa11.88□□□□□ -0.51
TOP3A-216ENST00000583804 MICAL3Q7RTP6 2002 aa11.87□□□□□ -0.51
TOP3A-216ENST00000583804 TTC26A0AVF1 554 aa11.87□□□□□ -0.51
TOP3A-216ENST00000583804 GRXCR1A8MXD5 290 aa11.87□□□□□ -0.51
TOP3A-216ENST00000583804 SLC16A3O15427 465 aaKnown RBP11.87□□□□□ -0.51
TOP3A-216ENST00000583804 MEFVO15553 781 aaPredicted RBP11.87□□□□□ -0.51
TOP3A-216ENST00000583804 GJB5O95377 273 aa11.87□□□□□ -0.51
TOP3A-216ENST00000583804 TRIM49P0CI25 452 aa11.87□□□□□ -0.51
TOP3A-216ENST00000583804 TRIM49CP0CI26 452 aa11.87□□□□□ -0.51
TOP3A-216ENST00000583804 DLATP10515 647 aaKnown RBP11.87□□□□□ -0.51
TOP3A-216ENST00000583804 SCNN1GP51170 649 aa11.87□□□□□ -0.51
TOP3A-216ENST00000583804 COPB1P53618 953 aaKnown RBP11.87□□□□□ -0.51
TOP3A-216ENST00000583804 UBASH3AP57075 661 aa11.87□□□□□ -0.51
TOP3A-216ENST00000583804 POU5F1Q01860 360 aaKnown RBP11.87□□□□□ -0.51
TOP3A-216ENST00000583804 RNASELQ05823 741 aaKnown RBP11.87□□□□□ -0.51
TOP3A-216ENST00000583804 PSMD6Q15008 389 aa11.87□□□□□ -0.51
TOP3A-216ENST00000583804 TCERG1LQ5VWI1 586 aa11.87□□□□□ -0.51
TOP3A-216ENST00000583804 ZSCAN30Q86W11 494 aa11.87□□□□□ -0.51
TOP3A-216ENST00000583804 FAM114A1Q8IWE2 563 aa11.87□□□□□ -0.51
TOP3A-216ENST00000583804 CD302Q8IX05 232 aa11.87□□□□□ -0.51
TOP3A-216ENST00000583804 DRC7Q8IY82 874 aa11.87□□□□□ -0.51
TOP3A-216ENST00000583804 ANKRD20A12PQ8NF67 263 aa11.87□□□□□ -0.51
TOP3A-216ENST00000583804 KIF12Q96FN5 646 aa11.87□□□□□ -0.51
TOP3A-216ENST00000583804 MFSD14AQ96MC6 490 aa11.87□□□□□ -0.51
TOP3A-216ENST00000583804 FNBP1Q96RU3 617 aa11.87□□□□□ -0.51
TOP3A-216ENST00000583804 POP1Q99575 1024 aaKnown RBP11.87□□□□□ -0.51
TOP3A-216ENST00000583804 MKNK1Q9BUB5 465 aa11.87□□□□□ -0.51
TOP3A-216ENST00000583804 TMEM117Q9H0C3 514 aa11.87□□□□□ -0.51
TOP3A-216ENST00000583804 INTS13Q9NVM9 706 aa11.87□□□□□ -0.51
TOP3A-216ENST00000583804 MIOSQ9NXC5 875 aa11.87□□□□□ -0.51
TOP3A-216ENST00000583804 ARMCX3Q9UH62 379 aaPredicted RBP11.87□□□□□ -0.51
TOP3A-216ENST00000583804 TTC3P53804 2025 aa11.86□□□□□ -0.51
TOP3A-216ENST00000583804 SMIM28A0A1B0GU29 152 aa11.86□□□□□ -0.51
TOP3A-216ENST00000583804 MAPK13O15264 365 aa11.86□□□□□ -0.51
TOP3A-216ENST00000583804 TEX33O43247 280 aa11.86□□□□□ -0.51
TOP3A-216ENST00000583804 TLL1O43897 1013 aa11.86□□□□□ -0.51
TOP3A-216ENST00000583804 THP07101 528 aa11.86□□□□□ -0.51
TOP3A-216ENST00000583804 TNNI1P19237 187 aa11.86□□□□□ -0.51
TOP3A-216ENST00000583804 VAMP7P51809 220 aa11.86□□□□□ -0.51
TOP3A-216ENST00000583804 RABGGTBP53611 331 aa11.86□□□□□ -0.51
TOP3A-216ENST00000583804 WNT7BP56706 349 aa11.86□□□□□ -0.51
TOP3A-216ENST00000583804 TFAMQ00059 246 aaKnown RBP11.86□□□□□ -0.51
TOP3A-216ENST00000583804 BTG3Q14201 252 aaPredicted RBP11.86□□□□□ -0.51
TOP3A-216ENST00000583804 SURF1Q15526 300 aa11.86□□□□□ -0.51
TOP3A-216ENST00000583804 XKR4Q5GH76 650 aa11.86□□□□□ -0.51
TOP3A-216ENST00000583804 LMBRD2Q68DH5 695 aaPredicted RBP11.86□□□□□ -0.51
TOP3A-216ENST00000583804 JADE1Q6IE81 842 aa11.86□□□□□ -0.51
TOP3A-216ENST00000583804 ALKAL1Q6UXT8 129 aa11.86□□□□□ -0.51
TOP3A-216ENST00000583804 INTS8Q75QN2 995 aaKnown RBP11.86□□□□□ -0.51
TOP3A-216ENST00000583804 FRMD5Q7Z6J6 570 aa11.86□□□□□ -0.51
TOP3A-216ENST00000583804 USP37Q86T82 979 aa11.86□□□□□ -0.51
TOP3A-216ENST00000583804 TDHQ8IZJ6 230 aa11.86□□□□□ -0.51
TOP3A-216ENST00000583804 ZMAT2Q96NC0 199 aaKnown RBP11.86□□□□□ -0.51
TOP3A-216ENST00000583804 CASD1Q96PB1 797 aa11.86□□□□□ -0.51
TOP3A-216ENST00000583804 FAM193BQ96PV7 902 aaPredicted RBP11.86□□□□□ -0.51
TOP3A-216ENST00000583804 TUBGCP2Q9BSJ2 902 aa11.86□□□□□ -0.51
TOP3A-216ENST00000583804 ASB7Q9H672 318 aa11.86□□□□□ -0.51
TOP3A-216ENST00000583804 METTL14Q9HCE5 456 aaKnown RBP11.86□□□□□ -0.51
TOP3A-216ENST00000583804 CNTN3Q9P232 1028 aa11.86□□□□□ -0.51
TOP3A-216ENST00000583804 KANSL3Q9P2N6 904 aa11.86□□□□□ -0.51
TOP3A-216ENST00000583804 INSL6Q9Y581 213 aa11.86□□□□□ -0.51
TOP3A-216ENST00000583804 PTGESO14684 152 aa11.85□□□□□ -0.51
TOP3A-216ENST00000583804 NFICP08651 508 aa11.85□□□□□ -0.51
TOP3A-216ENST00000583804 KCNE1P15382 129 aa11.85□□□□□ -0.51
TOP3A-216ENST00000583804 DLG4P78352 724 aa11.85□□□□□ -0.51
TOP3A-216ENST00000583804 BFSP1Q12934 665 aa11.85□□□□□ -0.51
TOP3A-216ENST00000583804 TMEM132DQ14C87 1099 aa11.85□□□□□ -0.51
TOP3A-216ENST00000583804 SPOUT1Q5T280 376 aaKnown RBP11.85□□□□□ -0.51
TOP3A-216ENST00000583804 FAM109BQ6ICB4 259 aaPredicted RBP11.85□□□□□ -0.51
TOP3A-216ENST00000583804 APTXQ7Z2E3 356 aaKnown RBP11.85□□□□□ -0.51
TOP3A-216ENST00000583804 GSTCDQ8NEC7 633 aa11.85□□□□□ -0.51
TOP3A-216ENST00000583804 PLEKHO2Q8TD55 490 aa11.85□□□□□ -0.51
TOP3A-216ENST00000583804 PARD3BQ8TEW8 1205 aa11.85□□□□□ -0.51
TOP3A-216ENST00000583804 CACTINQ8WUQ7 758 aaKnown RBP11.85□□□□□ -0.51
TOP3A-216ENST00000583804 C18orf25Q96B23 403 aaPredicted RBP11.85□□□□□ -0.51
TOP3A-216ENST00000583804 BORCS6Q96GS4 357 aa11.85□□□□□ -0.51
TOP3A-216ENST00000583804 RAD9AQ99638 391 aa11.85□□□□□ -0.51
TOP3A-216ENST00000583804 MRPL9Q9BYD2 267 aaKnown RBP11.85□□□□□ -0.51
TOP3A-216ENST00000583804 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.85□□□□□ -0.51
TOP3A-216ENST00000583804 SLC38A7Q9NVC3 462 aa11.85□□□□□ -0.51
TOP3A-216ENST00000583804 TBC1D13Q9NVG8 400 aa11.85□□□□□ -0.51
TOP3A-216ENST00000583804 LIMA1Q9UHB6 759 aaKnown RBP11.85□□□□□ -0.51
TOP3A-216ENST00000583804 PLAGL2Q9UPG8 496 aa11.85□□□□□ -0.51
TOP3A-216ENST00000583804 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.84□□□□□ -0.51
TOP3A-216ENST00000583804 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.84□□□□□ -0.51
TOP3A-216ENST00000583804 LRRIQ3A6PVS8 624 aaPredicted RBP11.84□□□□□ -0.51
TOP3A-216ENST00000583804 TNNC2P02585 160 aa11.84□□□□□ -0.51
TOP3A-216ENST00000583804 TMEM191BP0C7N4 346 aa11.84□□□□□ -0.51
TOP3A-216ENST00000583804 EEF1GP26641 437 aaKnown RBP11.84□□□□□ -0.51
TOP3A-216ENST00000583804 KLK7P49862 253 aa11.84□□□□□ -0.51
TOP3A-216ENST00000583804 GRIK3Q13003 919 aa11.84□□□□□ -0.51
TOP3A-216ENST00000583804 DUOXA2Q1HG44 320 aa11.84□□□□□ -0.51
TOP3A-216ENST00000583804 SARM1Q6SZW1 724 aa11.84□□□□□ -0.51
TOP3A-216ENST00000583804 TMC6Q7Z403 805 aa11.84□□□□□ -0.51
TOP3A-216ENST00000583804 ZNF280BQ86YH2 543 aa11.84□□□□□ -0.51
TOP3A-216ENST00000583804 GPIHBP1Q8IV16 184 aa11.84□□□□□ -0.51
TOP3A-216ENST00000583804 EFCAB13Q8IY85 973 aa11.84□□□□□ -0.51
TOP3A-216ENST00000583804 LRRC43Q8N309 656 aa11.84□□□□□ -0.51
TOP3A-216ENST00000583804 BEST2Q8NFU1 509 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms