RNA–Protein interactions for RNA: ENST00000583649.1

CASC3-208, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-208ENST00000583649 COL4A3Q01955 1670 aa12.34□□□□□ -0.43
CASC3-208ENST00000583649 CASTOR2A6NHX0 329 aa12.33□□□□□ -0.44
CASC3-208ENST00000583649 STBD1O95210 358 aa12.33□□□□□ -0.44
CASC3-208ENST00000583649 KIF4AO95239 1232 aa12.33□□□□□ -0.44
CASC3-208ENST00000583649 P4HBP07237 508 aaKnown RBP12.33□□□□□ -0.44
CASC3-208ENST00000583649 PTENP60484 403 aa12.33□□□□□ -0.44
CASC3-208ENST00000583649 KARSQ15046 597 aaKnown RBP12.33□□□□□ -0.44
CASC3-208ENST00000583649 TMEM132AQ24JP5 1023 aa12.33□□□□□ -0.44
CASC3-208ENST00000583649 SLC5A9Q2M3M2 681 aa12.33□□□□□ -0.44
CASC3-208ENST00000583649 PLA2G2CQ5R387 149 aa12.33□□□□□ -0.44
CASC3-208ENST00000583649 TTC22Q5TAA0 569 aa12.33□□□□□ -0.44
CASC3-208ENST00000583649 SH3PXD2AQ5TCZ1 1133 aa12.33□□□□□ -0.44
CASC3-208ENST00000583649 VITQ6UXI7 678 aa12.33□□□□□ -0.44
CASC3-208ENST00000583649 ZNF461Q8TAF7 563 aa12.33□□□□□ -0.44
CASC3-208ENST00000583649 RABGGTAQ92696 567 aa12.33□□□□□ -0.44
CASC3-208ENST00000583649 EXOC4Q96A65 974 aa12.33□□□□□ -0.44
CASC3-208ENST00000583649 ZNF512Q96ME7 567 aaPredicted RBP12.33□□□□□ -0.44
CASC3-208ENST00000583649 CCDC43Q96MW1 224 aaKnown RBP12.33□□□□□ -0.44
CASC3-208ENST00000583649 SLC32A1Q9H598 525 aa12.33□□□□□ -0.44
CASC3-208ENST00000583649 SLITRK6Q9H5Y7 841 aa12.33□□□□□ -0.44
CASC3-208ENST00000583649 KLK14Q9P0G3 267 aa12.33□□□□□ -0.44
CASC3-208ENST00000583649 ASPMQ8IZT6 3477 aa12.33□□□□□ -0.44
CASC3-208ENST00000583649 ARHGEF37A1IGU5 675 aa12.32□□□□□ -0.44
CASC3-208ENST00000583649 SHISA7A6NL88 538 aa12.32□□□□□ -0.44
CASC3-208ENST00000583649 CHADO15335 359 aa12.32□□□□□ -0.44
CASC3-208ENST00000583649 MARCH6O60337 910 aa12.32□□□□□ -0.44
CASC3-208ENST00000583649 B3GAT3O94766 335 aa12.32□□□□□ -0.44
CASC3-208ENST00000583649 NPTXRO95502 500 aa12.32□□□□□ -0.44
CASC3-208ENST00000583649 CSRP1P21291 193 aaKnown RBP12.32□□□□□ -0.44
CASC3-208ENST00000583649 FCARP24071 287 aa12.32□□□□□ -0.44
CASC3-208ENST00000583649 FUT2Q10981 343 aa12.32□□□□□ -0.44
CASC3-208ENST00000583649 EMC2Q15006 297 aa12.32□□□□□ -0.44
CASC3-208ENST00000583649 C11orf74Q86VG3 221 aa12.32□□□□□ -0.44
CASC3-208ENST00000583649 CAMKK1Q8N5S9 505 aa12.32□□□□□ -0.44
CASC3-208ENST00000583649 GSTCDQ8NEC7 633 aa12.32□□□□□ -0.44
CASC3-208ENST00000583649 ZSCAN18Q8TBC5 510 aaPredicted RBP12.32□□□□□ -0.44
CASC3-208ENST00000583649 ZC3H10Q96K80 434 aaKnown RBP12.32□□□□□ -0.44
CASC3-208ENST00000583649 SCNM1Q9BWG6 230 aa12.32□□□□□ -0.44
CASC3-208ENST00000583649 TRPV4Q9HBA0 871 aa12.32□□□□□ -0.44
CASC3-208ENST00000583649 ASAH2Q9NR71 780 aa12.32□□□□□ -0.44
CASC3-208ENST00000583649 NEUROG3Q9Y4Z2 214 aa12.32□□□□□ -0.44
CASC3-208ENST00000583649 TDRD15B5MCY1 1934 aaKnown RBP12.31□□□□□ -0.44
CASC3-208ENST00000583649 WDR27A2RRH5 827 aa12.31□□□□□ -0.44
CASC3-208ENST00000583649 C4orf47A7E2U8 309 aa12.31□□□□□ -0.44
CASC3-208ENST00000583649 TAF4O00268 1085 aa12.31□□□□□ -0.44
CASC3-208ENST00000583649 DPYSL4O14531 572 aa12.31□□□□□ -0.44
CASC3-208ENST00000583649 SLC27A2O14975 620 aa12.31□□□□□ -0.44
CASC3-208ENST00000583649 CAVIN2O95810 425 aa12.31□□□□□ -0.44
CASC3-208ENST00000583649 ARF4P18085 180 aaPredicted RBP12.31□□□□□ -0.44
CASC3-208ENST00000583649 FGFR3P22607 806 aa12.31□□□□□ -0.44
CASC3-208ENST00000583649 YWHABP31946 246 aaKnown RBP12.31□□□□□ -0.44
CASC3-208ENST00000583649 NPEPPSP55786 919 aa12.31□□□□□ -0.44
CASC3-208ENST00000583649 AMPD2Q01433 879 aa12.31□□□□□ -0.44
CASC3-208ENST00000583649 GAS6Q14393 721 aa12.31□□□□□ -0.44
CASC3-208ENST00000583649 XKR9Q5GH70 373 aa12.31□□□□□ -0.44
CASC3-208ENST00000583649 APBB1IPQ7Z5R6 666 aaPredicted RBP12.31□□□□□ -0.44
CASC3-208ENST00000583649 KBTBD6Q86V97 674 aa12.31□□□□□ -0.44
CASC3-208ENST00000583649 IFNLR1Q8IU57 520 aaPredicted RBP12.31□□□□□ -0.44
CASC3-208ENST00000583649 GATA6Q92908 595 aa12.31□□□□□ -0.44
CASC3-208ENST00000583649 UROC1Q96N76 676 aa12.31□□□□□ -0.44
CASC3-208ENST00000583649 ADPGKQ9BRR6 497 aa12.31□□□□□ -0.44
CASC3-208ENST00000583649 NFKBIZQ9BYH8 718 aa12.31□□□□□ -0.44
CASC3-208ENST00000583649 CYP4F11Q9HBI6 524 aa12.31□□□□□ -0.44
CASC3-208ENST00000583649 TMEM9BQ9NQ34 198 aa12.31□□□□□ -0.44
CASC3-208ENST00000583649 MAFFQ9ULX9 164 aa12.31□□□□□ -0.44
CASC3-208ENST00000583649 ANKRD11Q6UB99 2663 aaPredicted RBP12.3□□□□□ -0.44
CASC3-208ENST00000583649 KLF18A0A0U1RQI7 1052 aa12.3□□□□□ -0.44
CASC3-208ENST00000583649 A0A1B0GUA9 196 aa12.3□□□□□ -0.44
CASC3-208ENST00000583649 MYBPHLA2RUH7 354 aa12.3□□□□□ -0.44
CASC3-208ENST00000583649 SLC38A8A6NNN8 435 aa12.3□□□□□ -0.44
CASC3-208ENST00000583649 HEPACAM2A8MVW5 462 aa12.3□□□□□ -0.44
CASC3-208ENST00000583649 SPECC1L-ADORA2AF8WAN1 911 aa12.3□□□□□ -0.44
CASC3-208ENST00000583649 H7C4K7 107 aa12.3□□□□□ -0.44
CASC3-208ENST00000583649 TMEM189-UBE2V1I3L0A0 370 aa12.3□□□□□ -0.44
CASC3-208ENST00000583649 KHNYNO15037 678 aaKnown RBP12.3□□□□□ -0.44
CASC3-208ENST00000583649 ADAM12O43184 909 aa12.3□□□□□ -0.44
CASC3-208ENST00000583649 ATF2P15336 505 aa12.3□□□□□ -0.44
CASC3-208ENST00000583649 NLRP5P59047 1200 aa12.3□□□□□ -0.44
CASC3-208ENST00000583649 CREB5Q02930 508 aa12.3□□□□□ -0.44
CASC3-208ENST00000583649 ARHGAP29Q52LW3 1261 aa12.3□□□□□ -0.44
CASC3-208ENST00000583649 PRSS36Q5K4E3 855 aa12.3□□□□□ -0.44
CASC3-208ENST00000583649 MOXD1Q6UVY6 613 aa12.3□□□□□ -0.44
CASC3-208ENST00000583649 DHX32Q7L7V1 743 aaKnown RBP12.3□□□□□ -0.44
CASC3-208ENST00000583649 C4orf19Q8IY42 314 aa12.3□□□□□ -0.44
CASC3-208ENST00000583649 TBCKQ8TEA7 893 aa12.3□□□□□ -0.44
CASC3-208ENST00000583649 PRIMPOLQ96LW4 560 aa12.3□□□□□ -0.44
CASC3-208ENST00000583649 FAM20AQ96MK3 541 aa12.3□□□□□ -0.44
CASC3-208ENST00000583649 BMP2KQ9NSY1 1161 aaPredicted RBP12.3□□□□□ -0.44
CASC3-208ENST00000583649 RBM12Q9NTZ6 932 aaKnown RBP12.3□□□□□ -0.44
CASC3-208ENST00000583649 GREB1Q4ZG55 1949 aa12.3□□□□□ -0.44
CASC3-208ENST00000583649 CNOT1A5YKK6 2376 aaKnown RBP12.3□□□□□ -0.44
CASC3-208ENST00000583649 FASNP49327 2511 aaKnown RBP12.3□□□□□ -0.44
CASC3-208ENST00000583649 CYP3A7-CYP3A51PA0A087WV96 503 aa12.29□□□□□ -0.44
CASC3-208ENST00000583649 H0Y626 953 aa12.29□□□□□ -0.44
CASC3-208ENST00000583649 PRPF3O43395 683 aaKnown RBP12.29□□□□□ -0.44
CASC3-208ENST00000583649 TRIM16O95361 564 aa12.29□□□□□ -0.44
CASC3-208ENST00000583649 HMGB1P09429 215 aaKnown RBP12.29□□□□□ -0.44
CASC3-208ENST00000583649 SPINK2P20155 84 aa12.29□□□□□ -0.44
CASC3-208ENST00000583649 CYP3A7P24462 503 aa12.29□□□□□ -0.44
CASC3-208ENST00000583649 CTHP32929 405 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms