RNA–Protein interactions for RNA: ENST00000583173.5

TSEN54-208, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 5

Gene TSEN54, Length 798 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-208ENST00000583173 KIAA1586Q9HCI6 787 aa23.53■■□□□ 1.36
TSEN54-208ENST00000583173 LZTS1Q9Y250 596 aa23.53■■□□□ 1.36
TSEN54-208ENST00000583173 KIAA1671Q9BY89 1806 aa23.53■■□□□ 1.36
TSEN54-208ENST00000583173 TRIP11Q15643 1979 aa23.52■■□□□ 1.36
TSEN54-208ENST00000583173 CD44P16070 742 aaKnown RBP23.52■■□□□ 1.36
TSEN54-208ENST00000583173 PPM1AP35813 382 aa23.52■■□□□ 1.36
TSEN54-208ENST00000583173 UBE3AQ05086 875 aa23.52■■□□□ 1.36
TSEN54-208ENST00000583173 CBWD2Q8IUF1 395 aa23.52■■□□□ 1.36
TSEN54-208ENST00000583173 C18orf25Q96B23 403 aaPredicted RBP23.52■■□□□ 1.36
TSEN54-208ENST00000583173 VN1R3Q9BXE9 311 aa23.52■■□□□ 1.36
TSEN54-208ENST00000583173 LMAN2LQ9H0V9 348 aa23.52■■□□□ 1.36
TSEN54-208ENST00000583173 SLC38A7Q9NVC3 462 aa23.52■■□□□ 1.36
TSEN54-208ENST00000583173 CACNG4Q9UBN1 327 aa23.52■■□□□ 1.36
TSEN54-208ENST00000583173 DERAQ9Y315 318 aa23.52■■□□□ 1.36
TSEN54-208ENST00000583173 MTCH2Q9Y6C9 303 aa23.52■■□□□ 1.36
TSEN54-208ENST00000583173 NLRC5Q86WI3 1866 aa23.51■■□□□ 1.35
TSEN54-208ENST00000583173 F8W810 466 aa23.51■■□□□ 1.35
TSEN54-208ENST00000583173 CYP3A5P20815 502 aa23.51■■□□□ 1.35
TSEN54-208ENST00000583173 MCCD1P59942 119 aaPredicted RBP23.51■■□□□ 1.35
TSEN54-208ENST00000583173 SPAG1Q07617 926 aa23.51■■□□□ 1.35
TSEN54-208ENST00000583173 UPP1Q16831 310 aa23.51■■□□□ 1.35
TSEN54-208ENST00000583173 DDX53Q86TM3 631 aaKnown RBP23.51■■□□□ 1.35
TSEN54-208ENST00000583173 RNF168Q8IYW5 571 aaPredicted RBP23.51■■□□□ 1.35
TSEN54-208ENST00000583173 TRIML1Q8N9V2 468 aa23.51■■□□□ 1.35
TSEN54-208ENST00000583173 XXYLT1Q8NBI6 393 aa23.51■■□□□ 1.35
TSEN54-208ENST00000583173 POF1BQ8WVV4 589 aa23.51■■□□□ 1.35
TSEN54-208ENST00000583173 CASTOR2A6NHX0 329 aa23.5■■□□□ 1.35
TSEN54-208ENST00000583173 ZNF233A6NK53 670 aa23.5■■□□□ 1.35
TSEN54-208ENST00000583173 IL18RAPO95256 599 aa23.5■■□□□ 1.35
TSEN54-208ENST00000583173 LRPAP1P30533 357 aa23.5■■□□□ 1.35
TSEN54-208ENST00000583173 OR1G1P47890 313 aa23.5■■□□□ 1.35
TSEN54-208ENST00000583173 PPP2R3AQ06190 1150 aa23.5■■□□□ 1.35
TSEN54-208ENST00000583173 SPATA1Q5VX52 437 aa23.5■■□□□ 1.35
TSEN54-208ENST00000583173 JADE1Q6IE81 842 aa23.5■■□□□ 1.35
TSEN54-208ENST00000583173 RBM43Q6ZSC3 357 aaKnown RBP23.5■■□□□ 1.35
TSEN54-208ENST00000583173 TMEM130Q8N3G9 435 aa23.5■■□□□ 1.35
TSEN54-208ENST00000583173 RABGGTAQ92696 567 aa23.5■■□□□ 1.35
TSEN54-208ENST00000583173 MRPL38Q96DV4 380 aaKnown RBP23.5■■□□□ 1.35
TSEN54-208ENST00000583173 MFSD14AQ96MC6 490 aa23.5■■□□□ 1.35
TSEN54-208ENST00000583173 COLEC11Q9BWP8 271 aa23.5■■□□□ 1.35
TSEN54-208ENST00000583173 GZF1Q9H116 711 aaPredicted RBP23.5■■□□□ 1.35
TSEN54-208ENST00000583173 NUP62CLQ9H1M0 184 aa23.5■■□□□ 1.35
TSEN54-208ENST00000583173 C2CD2Q9Y426 696 aa23.5■■□□□ 1.35
TSEN54-208ENST00000583173 CITO14578 2027 aa23.49■■□□□ 1.35
TSEN54-208ENST00000583173 BIN1O00499 593 aa23.49■■□□□ 1.35
TSEN54-208ENST00000583173 FSCN2O14926 492 aa23.49■■□□□ 1.35
TSEN54-208ENST00000583173 CALUO43852 315 aaPredicted RBP23.49■■□□□ 1.35
TSEN54-208ENST00000583173 MBD3O95983 291 aa23.49■■□□□ 1.35
TSEN54-208ENST00000583173 NR3C1P04150 777 aa23.49■■□□□ 1.35
TSEN54-208ENST00000583173 RPL9P32969 192 aaKnown RBP23.49■■□□□ 1.35
TSEN54-208ENST00000583173 CYP2J2P51589 502 aa23.49■■□□□ 1.35
TSEN54-208ENST00000583173 CLCNKBP51801 687 aa23.49■■□□□ 1.35
TSEN54-208ENST00000583173 PMS1P54277 932 aaKnown RBP23.49■■□□□ 1.35
TSEN54-208ENST00000583173 ERVFC1P60507 584 aa23.49■■□□□ 1.35
TSEN54-208ENST00000583173 KRT17Q04695 432 aa23.49■■□□□ 1.35
TSEN54-208ENST00000583173 HSP90AA2PQ14568 343 aaPredicted RBP23.49■■□□□ 1.35
TSEN54-208ENST00000583173 DCLRE1AQ6PJP8 1040 aa23.49■■□□□ 1.35
TSEN54-208ENST00000583173 ZC3H3Q8IXZ2 948 aaKnown RBP23.49■■□□□ 1.35
TSEN54-208ENST00000583173 EFCAB13Q8IY85 973 aa23.49■■□□□ 1.35
TSEN54-208ENST00000583173 KIF12Q96FN5 646 aa23.49■■□□□ 1.35
TSEN54-208ENST00000583173 UROC1Q96N76 676 aa23.49■■□□□ 1.35
TSEN54-208ENST00000583173 GOLGA2P5Q9HBQ8 144 aa23.49■■□□□ 1.35
TSEN54-208ENST00000583173 RBAKQ9NYW8 714 aaPredicted RBP23.49■■□□□ 1.35
TSEN54-208ENST00000583173 UBQLN1Q9UMX0 589 aaKnown RBP23.49■■□□□ 1.35
TSEN54-208ENST00000583173 PRG3Q9Y2Y8 225 aaPredicted RBP23.49■■□□□ 1.35
TSEN54-208ENST00000583173 TMEM189-UBE2V1I3L0A0 370 aa23.48■■□□□ 1.35
TSEN54-208ENST00000583173 NFICP08651 508 aa23.48■■□□□ 1.35
TSEN54-208ENST00000583173 SNRNP35Q16560 246 aaKnown RBP23.48■■□□□ 1.35
TSEN54-208ENST00000583173 EDRF1Q3B7T1 1238 aa23.48■■□□□ 1.35
TSEN54-208ENST00000583173 ANKRD40Q6AI12 368 aa23.48■■□□□ 1.35
TSEN54-208ENST00000583173 TAS1R1Q7RTX1 841 aa23.48■■□□□ 1.35
TSEN54-208ENST00000583173 NT5DC4Q86YG4 428 aa23.48■■□□□ 1.35
TSEN54-208ENST00000583173 RDH13Q8NBN7 331 aa23.48■■□□□ 1.35
TSEN54-208ENST00000583173 FAM212AQ96EL1 285 aa23.48■■□□□ 1.35
TSEN54-208ENST00000583173 DDX27Q96GQ7 796 aaKnown RBP23.48■■□□□ 1.35
TSEN54-208ENST00000583173 DHTKD1Q96HY7 919 aaPredicted RBP23.48■■□□□ 1.35
TSEN54-208ENST00000583173 GAS2L1Q99501 681 aaPredicted RBP23.48■■□□□ 1.35
TSEN54-208ENST00000583173 PDE11AQ9HCR9 933 aa23.48■■□□□ 1.35
TSEN54-208ENST00000583173 TUBGCP4Q9UGJ1 667 aa23.48■■□□□ 1.35
TSEN54-208ENST00000583173 GTF3C5Q9Y5Q8 519 aaPredicted RBP23.48■■□□□ 1.35
TSEN54-208ENST00000583173 TDRD15B5MCY1 1934 aaKnown RBP23.48■■□□□ 1.35
TSEN54-208ENST00000583173 CCNE1P24864 410 aa23.47■■□□□ 1.35
TSEN54-208ENST00000583173 IRS1P35568 1242 aa23.47■■□□□ 1.35
TSEN54-208ENST00000583173 CASP4P49662 377 aa23.47■■□□□ 1.35
TSEN54-208ENST00000583173 CYP24A1Q07973 514 aa23.47■■□□□ 1.35
TSEN54-208ENST00000583173 FOXR2Q6PJQ5 311 aa23.47■■□□□ 1.35
TSEN54-208ENST00000583173 C3orf58Q8NDZ4 430 aa23.47■■□□□ 1.35
TSEN54-208ENST00000583173 CXorf38Q8TB03 319 aa23.47■■□□□ 1.35
TSEN54-208ENST00000583173 PLEKHO2Q8TD55 490 aa23.47■■□□□ 1.35
TSEN54-208ENST00000583173 TMEM169Q96HH4 297 aa23.47■■□□□ 1.35
TSEN54-208ENST00000583173 GPR62Q9BZJ7 368 aa23.47■■□□□ 1.35
TSEN54-208ENST00000583173 PUF60Q9UHX1 559 aaKnown RBP23.47■■□□□ 1.35
TSEN54-208ENST00000583173 MYO7AQ13402 2215 aa23.47■■□□□ 1.35
TSEN54-208ENST00000583173 ANO9A1A5B4 782 aa23.46■■□□□ 1.35
TSEN54-208ENST00000583173 EXOC3O60645 756 aa23.46■■□□□ 1.35
TSEN54-208ENST00000583173 LILRB3O75022 631 aa23.46■■□□□ 1.35
TSEN54-208ENST00000583173 KIF4AO95239 1232 aa23.46■■□□□ 1.35
TSEN54-208ENST00000583173 PPP1R2P41236 205 aa23.46■■□□□ 1.35
TSEN54-208ENST00000583173 GUCY2FP51841 1108 aa23.46■■□□□ 1.35
TSEN54-208ENST00000583173 TMEM132DQ14C87 1099 aa23.46■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms