RNA–Protein interactions for RNA: ENST00000582122.1

TOP3A-212, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 553 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-212ENST00000582122 TDRD15B5MCY1 1934 aaKnown RBP11.33□□□□□ -0.6
TOP3A-212ENST00000582122 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.33□□□□□ -0.6
TOP3A-212ENST00000582122 ANKRD63C9JTQ0 380 aa11.33□□□□□ -0.6
TOP3A-212ENST00000582122 KLRC4O43908 158 aa11.33□□□□□ -0.6
TOP3A-212ENST00000582122 EXTL3O43909 919 aa11.33□□□□□ -0.6
TOP3A-212ENST00000582122 FAM189A1O60320 539 aa11.33□□□□□ -0.6
TOP3A-212ENST00000582122 URODP06132 367 aa11.33□□□□□ -0.6
TOP3A-212ENST00000582122 CTSAP10619 480 aa11.33□□□□□ -0.6
TOP3A-212ENST00000582122 CASP5P51878 434 aa11.33□□□□□ -0.6
TOP3A-212ENST00000582122 SKIV2LQ15477 1246 aaKnown RBP11.33□□□□□ -0.6
TOP3A-212ENST00000582122 KIAA1841Q6NSI8 718 aa11.33□□□□□ -0.6
TOP3A-212ENST00000582122 SLC39A4Q6P5W5 647 aa11.33□□□□□ -0.6
TOP3A-212ENST00000582122 TMC7Q7Z402 723 aa11.33□□□□□ -0.6
TOP3A-212ENST00000582122 USP37Q86T82 979 aa11.33□□□□□ -0.6
TOP3A-212ENST00000582122 PPFIBP1Q86W92 1011 aa11.33□□□□□ -0.6
TOP3A-212ENST00000582122 GRAMD1CQ8IYS0 662 aa11.33□□□□□ -0.6
TOP3A-212ENST00000582122 VPS52Q8N1B4 723 aa11.33□□□□□ -0.6
TOP3A-212ENST00000582122 GPD1LQ8N335 351 aa11.33□□□□□ -0.6
TOP3A-212ENST00000582122 CEP120Q8N960 986 aa11.33□□□□□ -0.6
TOP3A-212ENST00000582122 BEST2Q8NFU1 509 aa11.33□□□□□ -0.6
TOP3A-212ENST00000582122 CACTINQ8WUQ7 758 aaKnown RBP11.33□□□□□ -0.6
TOP3A-212ENST00000582122 SCFD1Q8WVM8 642 aa11.33□□□□□ -0.6
TOP3A-212ENST00000582122 SMARCE1Q969G3 411 aa11.33□□□□□ -0.6
TOP3A-212ENST00000582122 TCF25Q9BQ70 676 aa11.33□□□□□ -0.6
TOP3A-212ENST00000582122 EMILIN2Q9BXX0 1053 aa11.33□□□□□ -0.6
TOP3A-212ENST00000582122 SLC39A2Q9NP94 309 aa11.33□□□□□ -0.6
TOP3A-212ENST00000582122 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.33□□□□□ -0.6
TOP3A-212ENST00000582122 MRPL17Q9NRX2 175 aaKnown RBP11.33□□□□□ -0.6
TOP3A-212ENST00000582122 MIOSQ9NXC5 875 aa11.33□□□□□ -0.6
TOP3A-212ENST00000582122 DPP7Q9UHL4 492 aa11.33□□□□□ -0.6
TOP3A-212ENST00000582122 ADAM28Q9UKQ2 775 aa11.33□□□□□ -0.6
TOP3A-212ENST00000582122 ZNF233A6NK53 670 aa11.32□□□□□ -0.6
TOP3A-212ENST00000582122 NT5C1B-RDH14C9J2C7 533 aa11.32□□□□□ -0.6
TOP3A-212ENST00000582122 PDXKO00764 312 aa11.32□□□□□ -0.6
TOP3A-212ENST00000582122 FSCN2O14926 492 aa11.32□□□□□ -0.6
TOP3A-212ENST00000582122 PRPF40AO75400 957 aaKnown RBP11.32□□□□□ -0.6
TOP3A-212ENST00000582122 B3GAT3O94766 335 aa11.32□□□□□ -0.6
TOP3A-212ENST00000582122 SOD2P04179 222 aa11.32□□□□□ -0.6
TOP3A-212ENST00000582122 CXCL8P10145 99 aa11.32□□□□□ -0.6
TOP3A-212ENST00000582122 BMP1P13497 986 aa11.32□□□□□ -0.6
TOP3A-212ENST00000582122 ADSSP30520 456 aa11.32□□□□□ -0.6
TOP3A-212ENST00000582122 AFF1P51825 1210 aaKnown RBP11.32□□□□□ -0.6
TOP3A-212ENST00000582122 KCNA1Q09470 495 aa11.32□□□□□ -0.6
TOP3A-212ENST00000582122 STIM1Q13586 685 aa11.32□□□□□ -0.6
TOP3A-212ENST00000582122 TMEM132DQ14C87 1099 aa11.32□□□□□ -0.6
TOP3A-212ENST00000582122 ENOX2Q16206 610 aaKnown RBP11.32□□□□□ -0.6
TOP3A-212ENST00000582122 USP41Q3LFD5 358 aa11.32□□□□□ -0.6
TOP3A-212ENST00000582122 TPRNQ4KMQ1 711 aa11.32□□□□□ -0.6
TOP3A-212ENST00000582122 COBLL1Q53SF7 1204 aa11.32□□□□□ -0.6
TOP3A-212ENST00000582122 SLC9A9Q8IVB4 645 aa11.32□□□□□ -0.6
TOP3A-212ENST00000582122 GUF1Q8N442 669 aaKnown RBP11.32□□□□□ -0.6
TOP3A-212ENST00000582122 MRPL43Q8N983 215 aaKnown RBP11.32□□□□□ -0.6
TOP3A-212ENST00000582122 HLA-CQ95604 372 aa11.32□□□□□ -0.6
TOP3A-212ENST00000582122 KIF12Q96FN5 646 aa11.32□□□□□ -0.6
TOP3A-212ENST00000582122 NECAB3Q96P71 396 aaPredicted RBP11.32□□□□□ -0.6
TOP3A-212ENST00000582122 HERC2P3Q9BVR0 1158 aa11.32□□□□□ -0.6
TOP3A-212ENST00000582122 TLE6Q9H808 572 aa11.32□□□□□ -0.6
TOP3A-212ENST00000582122 AGPAT3Q9NRZ7 376 aa11.32□□□□□ -0.6
TOP3A-212ENST00000582122 HCSTQ9UBK5 93 aa11.32□□□□□ -0.6
TOP3A-212ENST00000582122 PRG3Q9Y2Y8 225 aaPredicted RBP11.32□□□□□ -0.6
TOP3A-212ENST00000582122 CHD7Q9P2D1 2997 aa11.32□□□□□ -0.6
TOP3A-212ENST00000582122 CHD9Q3L8U1 2897 aa11.31□□□□□ -0.6
TOP3A-212ENST00000582122 KIAA1671Q9BY89 1806 aa11.31□□□□□ -0.6
TOP3A-212ENST00000582122 CASTOR2A6NHX0 329 aa11.31□□□□□ -0.6
TOP3A-212ENST00000582122 LACTBL1A8MY62 500 aa11.31□□□□□ -0.6
TOP3A-212ENST00000582122 CALUO43852 315 aaPredicted RBP11.31□□□□□ -0.6
TOP3A-212ENST00000582122 CXCL14O95715 111 aa11.31□□□□□ -0.6
TOP3A-212ENST00000582122 RPL13P26373 211 aaKnown RBP11.31□□□□□ -0.6
TOP3A-212ENST00000582122 CASP1P29466 404 aa11.31□□□□□ -0.6
TOP3A-212ENST00000582122 LRPAP1P30533 357 aa11.31□□□□□ -0.6
TOP3A-212ENST00000582122 PBX3P40426 434 aa11.31□□□□□ -0.6
TOP3A-212ENST00000582122 ACOT2P49753 483 aa11.31□□□□□ -0.6
TOP3A-212ENST00000582122 STK4Q13043 487 aa11.31□□□□□ -0.6
TOP3A-212ENST00000582122 NAB2Q15742 525 aa11.31□□□□□ -0.6
TOP3A-212ENST00000582122 ZBTB6Q15916 424 aa11.31□□□□□ -0.6
TOP3A-212ENST00000582122 UPP1Q16831 310 aa11.31□□□□□ -0.6
TOP3A-212ENST00000582122 PUS10Q3MIT2 529 aaKnown RBP11.31□□□□□ -0.6
TOP3A-212ENST00000582122 GLRA4Q5JXX5 417 aa11.31□□□□□ -0.6
TOP3A-212ENST00000582122 FUT10Q6P4F1 479 aa11.31□□□□□ -0.6
TOP3A-212ENST00000582122 BRSK2Q8IWQ3 736 aa11.31□□□□□ -0.6
TOP3A-212ENST00000582122 XXYLT1Q8NBI6 393 aa11.31□□□□□ -0.6
TOP3A-212ENST00000582122 SPATA20Q8TB22 786 aa11.31□□□□□ -0.6
TOP3A-212ENST00000582122 PABPC5Q96DU9 382 aaKnown RBP11.31□□□□□ -0.6
TOP3A-212ENST00000582122 FBXL18Q96ME1 805 aa11.31□□□□□ -0.6
TOP3A-212ENST00000582122 FAM213AQ9BRX8 229 aa11.31□□□□□ -0.6
TOP3A-212ENST00000582122 OXCT2Q9BYC2 517 aaPredicted RBP11.31□□□□□ -0.6
TOP3A-212ENST00000582122 HAPLN2Q9GZV7 340 aa11.31□□□□□ -0.6
TOP3A-212ENST00000582122 ZBP1Q9H171 429 aa11.31□□□□□ -0.6
TOP3A-212ENST00000582122 RBAKQ9NYW8 714 aaPredicted RBP11.31□□□□□ -0.6
TOP3A-212ENST00000582122 HSPBP1Q9NZL4 362 aa11.31□□□□□ -0.6
TOP3A-212ENST00000582122 FAM50BQ9Y247 325 aa11.31□□□□□ -0.6
TOP3A-212ENST00000582122 R3HCC1Q9Y3T6 440 aaKnown RBP11.31□□□□□ -0.6
TOP3A-212ENST00000582122 NUB1Q9Y5A7 615 aa11.31□□□□□ -0.6
TOP3A-212ENST00000582122 MUC6Q6W4X9 2439 aa11.3□□□□□ -0.6
TOP3A-212ENST00000582122 COL4A4P53420 1690 aaPredicted RBP11.3□□□□□ -0.6
TOP3A-212ENST00000582122 PODXLO00592 558 aa11.3□□□□□ -0.6
TOP3A-212ENST00000582122 SYN3O14994 580 aa11.3□□□□□ -0.6
TOP3A-212ENST00000582122 TGFB1I1O43294 461 aa11.3□□□□□ -0.6
TOP3A-212ENST00000582122 DNAJB1P25685 340 aa11.3□□□□□ -0.6
TOP3A-212ENST00000582122 PNPLA4P41247 253 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms