RNA–Protein interactions for RNA: ENST00000580799.2

GGA3-210, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-210ENST00000580799 ATF7IP2Q5U623 682 aa11.31□□□□□ -0.6
GGA3-210ENST00000580799 EEF1DP3Q658K8 133 aa11.31□□□□□ -0.6
GGA3-210ENST00000580799 MAML2Q8IZL2 1156 aaPredicted RBP11.31□□□□□ -0.6
GGA3-210ENST00000580799 SUMF1Q8NBK3 374 aa11.31□□□□□ -0.6
GGA3-210ENST00000580799 ST13P5Q8NFI4 369 aaPredicted RBP11.31□□□□□ -0.6
GGA3-210ENST00000580799 RMDN1Q96DB5 314 aa11.31□□□□□ -0.6
GGA3-210ENST00000580799 DDX27Q96GQ7 796 aaKnown RBP11.31□□□□□ -0.6
GGA3-210ENST00000580799 KXD1Q9BQD3 176 aa11.31□□□□□ -0.6
GGA3-210ENST00000580799 CXCL16Q9H2A7 254 aa11.31□□□□□ -0.6
GGA3-210ENST00000580799 AVENQ9NQS1 362 aaPredicted RBP11.31□□□□□ -0.6
GGA3-210ENST00000580799 TOPORSQ9NS56 1045 aaPredicted RBP11.31□□□□□ -0.6
GGA3-210ENST00000580799 SPATA6Q9NWH7 488 aaPredicted RBP11.31□□□□□ -0.6
GGA3-210ENST00000580799 HCFC1R1Q9NWW0 138 aa11.31□□□□□ -0.6
GGA3-210ENST00000580799 DNMT3BQ9UBC3 853 aaKnown RBP11.31□□□□□ -0.6
GGA3-210ENST00000580799 MRPS23Q9Y3D9 190 aaKnown RBP11.31□□□□□ -0.6
GGA3-210ENST00000580799 PCDHGA2Q9Y5H1 932 aa11.31□□□□□ -0.6
GGA3-210ENST00000580799 CDY1Q9Y6F8 540 aa11.31□□□□□ -0.6
GGA3-210ENST00000580799 PHLPP2Q6ZVD8 1323 aa11.31□□□□□ -0.6
GGA3-210ENST00000580799 ARHGEF37A1IGU5 675 aa11.3□□□□□ -0.6
GGA3-210ENST00000580799 FAM170BA6NMN3 283 aa11.3□□□□□ -0.6
GGA3-210ENST00000580799 K7ERI5 159 aa11.3□□□□□ -0.6
GGA3-210ENST00000580799 NCAM2O15394 837 aa11.3□□□□□ -0.6
GGA3-210ENST00000580799 JAK2O60674 1132 aa11.3□□□□□ -0.6
GGA3-210ENST00000580799 EIF5BO60841 1220 aaKnown RBP11.3□□□□□ -0.6
GGA3-210ENST00000580799 LRRN2O75325 713 aa11.3□□□□□ -0.6
GGA3-210ENST00000580799 EDN1P05305 212 aa11.3□□□□□ -0.6
GGA3-210ENST00000580799 RPS9P46781 194 aaKnown RBP11.3□□□□□ -0.6
GGA3-210ENST00000580799 CLCNKBP51801 687 aa11.3□□□□□ -0.6
GGA3-210ENST00000580799 YARSP54577 528 aaKnown RBP11.3□□□□□ -0.6
GGA3-210ENST00000580799 PUM1Q14671 1186 aaKnown RBP eCLIP11.3□□□□□ -0.6
GGA3-210ENST00000580799 GLRA4Q5JXX5 417 aa11.3□□□□□ -0.6
GGA3-210ENST00000580799 ZBTB41Q5SVQ8 909 aa11.3□□□□□ -0.6
GGA3-210ENST00000580799 SLC8B1Q6J4K2 584 aa11.3□□□□□ -0.6
GGA3-210ENST00000580799 DGLUCYQ7Z3D6 616 aa11.3□□□□□ -0.6
GGA3-210ENST00000580799 ZNF461Q8TAF7 563 aa11.3□□□□□ -0.6
GGA3-210ENST00000580799 CCDC94Q9BW85 323 aaPredicted RBP11.3□□□□□ -0.6
GGA3-210ENST00000580799 LTB4R2Q9NPC1 389 aa11.3□□□□□ -0.6
GGA3-210ENST00000580799 SLC38A7Q9NVC3 462 aa11.3□□□□□ -0.6
GGA3-210ENST00000580799 TNFSF13BQ9Y275 285 aa11.3□□□□□ -0.6
GGA3-210ENST00000580799 USP20Q9Y2K6 914 aa11.3□□□□□ -0.6
GGA3-210ENST00000580799 MRPS17Q9Y2R5 130 aaKnown RBP11.3□□□□□ -0.6
GGA3-210ENST00000580799 STK24Q9Y6E0 443 aa11.3□□□□□ -0.6
GGA3-210ENST00000580799 EP300Q09472 2414 aaPredicted RBP11.3□□□□□ -0.6
GGA3-210ENST00000580799 SMIM28A0A1B0GU29 152 aa11.29□□□□□ -0.6
GGA3-210ENST00000580799 ABLIM3O94929 683 aa11.29□□□□□ -0.6
GGA3-210ENST00000580799 LRG1P02750 347 aa11.29□□□□□ -0.6
GGA3-210ENST00000580799 RHOP08100 348 aa11.29□□□□□ -0.6
GGA3-210ENST00000580799 PTPN2P17706 415 aa11.29□□□□□ -0.6
GGA3-210ENST00000580799 TKTP29401 623 aaKnown RBP11.29□□□□□ -0.6
GGA3-210ENST00000580799 CCT6AP40227 531 aaKnown RBP11.29□□□□□ -0.6
GGA3-210ENST00000580799 GRM5P41594 1212 aa11.29□□□□□ -0.6
GGA3-210ENST00000580799 FXR2P51116 673 aaKnown RBP eCLIP11.29□□□□□ -0.6
GGA3-210ENST00000580799 NEK4P51957 841 aa11.29□□□□□ -0.6
GGA3-210ENST00000580799 FOSBP53539 338 aa11.29□□□□□ -0.6
GGA3-210ENST00000580799 ROR1Q01973 937 aa11.29□□□□□ -0.6
GGA3-210ENST00000580799 XKR4Q5GH76 650 aa11.29□□□□□ -0.6
GGA3-210ENST00000580799 NT5DC1Q5TFE4 455 aa11.29□□□□□ -0.6
GGA3-210ENST00000580799 TCEAL8Q8IYN2 117 aa11.29□□□□□ -0.6
GGA3-210ENST00000580799 GPR161Q8N6U8 529 aaKnown RBP11.29□□□□□ -0.6
GGA3-210ENST00000580799 ATRIPQ8WXE1 791 aa11.29□□□□□ -0.6
GGA3-210ENST00000580799 ING5Q8WYH8 240 aa11.29□□□□□ -0.6
GGA3-210ENST00000580799 DNASE1L2Q92874 299 aa11.29□□□□□ -0.6
GGA3-210ENST00000580799 CLDN23Q96B33 292 aa11.29□□□□□ -0.6
GGA3-210ENST00000580799 KIFC3Q9BVG8 833 aa11.29□□□□□ -0.6
GGA3-210ENST00000580799 BHMT2Q9H2M3 363 aa11.29□□□□□ -0.6
GGA3-210ENST00000580799 FOXP1Q9H334 677 aaPredicted RBP11.29□□□□□ -0.6
GGA3-210ENST00000580799 DOCK6Q96HP0 2047 aa11.29□□□□□ -0.6
GGA3-210ENST00000580799 NOTCH4Q99466 2003 aa11.29□□□□□ -0.6
GGA3-210ENST00000580799 COL4A3Q01955 1670 aa11.29□□□□□ -0.6
GGA3-210ENST00000580799 OTOGLQ3ZCN5 2332 aa11.28□□□□□ -0.6
GGA3-210ENST00000580799 H7C4K7 107 aa11.28□□□□□ -0.6
GGA3-210ENST00000580799 PRRG1O14668 218 aa11.28□□□□□ -0.6
GGA3-210ENST00000580799 SYN3O14994 580 aa11.28□□□□□ -0.6
GGA3-210ENST00000580799 MICAL2O94851 1124 aa11.28□□□□□ -0.6
GGA3-210ENST00000580799 ATF2P15336 505 aa11.28□□□□□ -0.6
GGA3-210ENST00000580799 SDHBP21912 280 aa11.28□□□□□ -0.6
GGA3-210ENST00000580799 ELF1P32519 619 aa11.28□□□□□ -0.6
GGA3-210ENST00000580799 TRAPPC10P48553 1259 aa11.28□□□□□ -0.6
GGA3-210ENST00000580799 CSTF1Q05048 431 aaKnown RBP11.28□□□□□ -0.6
GGA3-210ENST00000580799 PDIA5Q14554 519 aa11.28□□□□□ -0.6
GGA3-210ENST00000580799 SLC5A9Q2M3M2 681 aa11.28□□□□□ -0.6
GGA3-210ENST00000580799 ZNF568Q3ZCX4 644 aa11.28□□□□□ -0.6
GGA3-210ENST00000580799 CD300LGQ6UXG3 332 aa11.28□□□□□ -0.6
GGA3-210ENST00000580799 ALKAL1Q6UXT8 129 aa11.28□□□□□ -0.6
GGA3-210ENST00000580799 ZNF852Q6ZMS4 543 aa11.28□□□□□ -0.6
GGA3-210ENST00000580799 TPRG1Q6ZUI0 275 aa11.28□□□□□ -0.6
GGA3-210ENST00000580799 ZBTB44Q8NCP5 570 aa11.28□□□□□ -0.6
GGA3-210ENST00000580799 C3orf58Q8NDZ4 430 aa11.28□□□□□ -0.6
GGA3-210ENST00000580799 SECISBP2LQ93073 1101 aaKnown RBP11.28□□□□□ -0.6
GGA3-210ENST00000580799 ELSPBP1Q96BH3 223 aa11.28□□□□□ -0.6
GGA3-210ENST00000580799 MCRS1Q96EZ8 462 aa11.28□□□□□ -0.6
GGA3-210ENST00000580799 C8orf76Q96K31 380 aa11.28□□□□□ -0.6
GGA3-210ENST00000580799 LLPHQ9BRT6 129 aaKnown RBP11.28□□□□□ -0.6
GGA3-210ENST00000580799 FAM126AQ9BYI3 521 aaPredicted RBP11.28□□□□□ -0.6
GGA3-210ENST00000580799 RAB34Q9BZG1 259 aa11.28□□□□□ -0.6
GGA3-210ENST00000580799 CDT1Q9H211 546 aa11.28□□□□□ -0.6
GGA3-210ENST00000580799 GOLGA2P5Q9HBQ8 144 aa11.28□□□□□ -0.6
GGA3-210ENST00000580799 ZSCAN32Q9NX65 697 aa11.28□□□□□ -0.6
GGA3-210ENST00000580799 DLL3Q9NYJ7 618 aa11.28□□□□□ -0.6
GGA3-210ENST00000580799 NCDNQ9UBB6 729 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms