RNA–Protein interactions for RNA: ENST00000580533.1

SNORD3C-201, Transcript of small nucleolar RNA, C/D box 3C, humanhuman

BASIC

Gene SNORD3C, Length 581 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD3C-201ENST00000580533 GAD1Q99259 594 aa12.72□□□□□ -0.37
SNORD3C-201ENST00000580533 RAD9AQ99638 391 aa12.72□□□□□ -0.37
SNORD3C-201ENST00000580533 GDF15Q99988 308 aa12.72□□□□□ -0.37
SNORD3C-201ENST00000580533 IMPG2Q9BZV3 1241 aa12.72□□□□□ -0.37
SNORD3C-201ENST00000580533 AAASQ9NRG9 546 aa12.72□□□□□ -0.37
SNORD3C-201ENST00000580533 STK39Q9UEW8 545 aa12.72□□□□□ -0.37
SNORD3C-201ENST00000580533 ITGA11Q9UKX5 1188 aa12.72□□□□□ -0.37
SNORD3C-201ENST00000580533 INPP5FQ9Y2H2 1132 aa12.72□□□□□ -0.37
SNORD3C-201ENST00000580533 RWDD3Q9Y3V2 267 aa12.72□□□□□ -0.37
SNORD3C-201ENST00000580533 MICAL3Q7RTP6 2002 aa12.72□□□□□ -0.37
SNORD3C-201ENST00000580533 SMIM28A0A1B0GU29 152 aa12.71□□□□□ -0.37
SNORD3C-201ENST00000580533 A0A1W2PPC1 479 aa12.71□□□□□ -0.37
SNORD3C-201ENST00000580533 ARHGEF37A1IGU5 675 aa12.71□□□□□ -0.37
SNORD3C-201ENST00000580533 TBKBP1A7MCY6 615 aa12.71□□□□□ -0.37
SNORD3C-201ENST00000580533 PES1O00541 588 aaKnown RBP12.71□□□□□ -0.37
SNORD3C-201ENST00000580533 CBFA2T2O43439 604 aa12.71□□□□□ -0.37
SNORD3C-201ENST00000580533 TLL1O43897 1013 aa12.71□□□□□ -0.37
SNORD3C-201ENST00000580533 PHACTR2O75167 634 aa12.71□□□□□ -0.37
SNORD3C-201ENST00000580533 OFD1O75665 1012 aa12.71□□□□□ -0.37
SNORD3C-201ENST00000580533 SERPINC1P01008 464 aa12.71□□□□□ -0.37
SNORD3C-201ENST00000580533 AFPP02771 609 aaKnown RBP12.71□□□□□ -0.37
SNORD3C-201ENST00000580533 RPL9P32969 192 aaKnown RBP12.71□□□□□ -0.37
SNORD3C-201ENST00000580533 PNPLA4P41247 253 aa12.71□□□□□ -0.37
SNORD3C-201ENST00000580533 EPHB4P54760 987 aa12.71□□□□□ -0.37
SNORD3C-201ENST00000580533 CLDN10P78369 228 aa12.71□□□□□ -0.37
SNORD3C-201ENST00000580533 TFAMQ00059 246 aaKnown RBP12.71□□□□□ -0.37
SNORD3C-201ENST00000580533 BIRC3Q13489 604 aa12.71□□□□□ -0.37
SNORD3C-201ENST00000580533 TRPC3Q13507 836 aa12.71□□□□□ -0.37
SNORD3C-201ENST00000580533 BTG3Q14201 252 aaPredicted RBP12.71□□□□□ -0.37
SNORD3C-201ENST00000580533 NCAPHQ15003 741 aa12.71□□□□□ -0.37
SNORD3C-201ENST00000580533 HS1BP3Q53T59 392 aa12.71□□□□□ -0.37
SNORD3C-201ENST00000580533 ZBTB41Q5SVQ8 909 aa12.71□□□□□ -0.37
SNORD3C-201ENST00000580533 FKBP15Q5T1M5 1219 aa12.71□□□□□ -0.37
SNORD3C-201ENST00000580533 RASIP1Q5U651 963 aa12.71□□□□□ -0.37
SNORD3C-201ENST00000580533 KRT39Q6A163 491 aa12.71□□□□□ -0.37
SNORD3C-201ENST00000580533 HERC6Q8IVU3 1022 aa12.71□□□□□ -0.37
SNORD3C-201ENST00000580533 TRIM59Q8IWR1 403 aa12.71□□□□□ -0.37
SNORD3C-201ENST00000580533 VWCEQ96DN2 955 aa12.71□□□□□ -0.37
SNORD3C-201ENST00000580533 EEF2KMTQ96G04 330 aa12.71□□□□□ -0.37
SNORD3C-201ENST00000580533 PDLIM2Q96JY6 352 aa12.71□□□□□ -0.37
SNORD3C-201ENST00000580533 ZNF560Q96MR9 790 aa12.71□□□□□ -0.37
SNORD3C-201ENST00000580533 TUBGCP2Q9BSJ2 902 aa12.71□□□□□ -0.37
SNORD3C-201ENST00000580533 RNF39Q9H2S5 420 aa12.71□□□□□ -0.37
SNORD3C-201ENST00000580533 TMEM8AQ9HCN3 771 aa12.71□□□□□ -0.37
SNORD3C-201ENST00000580533 PDE11AQ9HCR9 933 aa12.71□□□□□ -0.37
SNORD3C-201ENST00000580533 SAMSN1Q9NSI8 373 aaKnown RBP12.71□□□□□ -0.37
SNORD3C-201ENST00000580533 INTS13Q9NVM9 706 aa12.71□□□□□ -0.37
SNORD3C-201ENST00000580533 KLK14Q9P0G3 267 aa12.71□□□□□ -0.37
SNORD3C-201ENST00000580533 RALGAPA2Q2PPJ7 1873 aa12.7□□□□□ -0.38
SNORD3C-201ENST00000580533 PMM2O15305 246 aa12.7□□□□□ -0.38
SNORD3C-201ENST00000580533 CLSTN1O94985 981 aa12.7□□□□□ -0.38
SNORD3C-201ENST00000580533 FGFR1P11362 822 aa12.7□□□□□ -0.38
SNORD3C-201ENST00000580533 ZNF18P17022 549 aa12.7□□□□□ -0.38
SNORD3C-201ENST00000580533 MXI1P50539 228 aa12.7□□□□□ -0.38
SNORD3C-201ENST00000580533 SCNN1GP51170 649 aa12.7□□□□□ -0.38
SNORD3C-201ENST00000580533 MCCD1P59942 119 aaPredicted RBP12.7□□□□□ -0.38
SNORD3C-201ENST00000580533 DEFB103AP81534 67 aa12.7□□□□□ -0.38
SNORD3C-201ENST00000580533 MYO1EQ12965 1108 aa12.7□□□□□ -0.38
SNORD3C-201ENST00000580533 TUSC3Q13454 348 aa12.7□□□□□ -0.38
SNORD3C-201ENST00000580533 RAB30Q15771 203 aa12.7□□□□□ -0.38
SNORD3C-201ENST00000580533 TCTN1Q2MV58 587 aa12.7□□□□□ -0.38
SNORD3C-201ENST00000580533 UVSSAQ2YD98 709 aa12.7□□□□□ -0.38
SNORD3C-201ENST00000580533 CLLU1OSQ5K130 101 aa12.7□□□□□ -0.38
SNORD3C-201ENST00000580533 SPOUT1Q5T280 376 aaKnown RBP12.7□□□□□ -0.38
SNORD3C-201ENST00000580533 JADE1Q6IE81 842 aa12.7□□□□□ -0.38
SNORD3C-201ENST00000580533 TMEM192Q8IY95 271 aa12.7□□□□□ -0.38
SNORD3C-201ENST00000580533 TDHQ8IZJ6 230 aa12.7□□□□□ -0.38
SNORD3C-201ENST00000580533 CRIPAKQ8N1N5 446 aa12.7□□□□□ -0.38
SNORD3C-201ENST00000580533 FIBCD1Q8N539 461 aa12.7□□□□□ -0.38
SNORD3C-201ENST00000580533 RNF214Q8ND24 703 aa12.7□□□□□ -0.38
SNORD3C-201ENST00000580533 MED15Q96RN5 788 aa12.7□□□□□ -0.38
SNORD3C-201ENST00000580533 TMEM175Q9BSA9 504 aa12.7□□□□□ -0.38
SNORD3C-201ENST00000580533 RTN4Q9NQC3 1192 aaKnown RBP12.7□□□□□ -0.38
SNORD3C-201ENST00000580533 RRAGDQ9NQL2 400 aaPredicted RBP12.7□□□□□ -0.38
SNORD3C-201ENST00000580533 LIMA1Q9UHB6 759 aaKnown RBP12.7□□□□□ -0.38
SNORD3C-201ENST00000580533 TTC3P53804 2025 aa12.69□□□□□ -0.38
SNORD3C-201ENST00000580533 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.69□□□□□ -0.38
SNORD3C-201ENST00000580533 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.69□□□□□ -0.38
SNORD3C-201ENST00000580533 GTPBP10A4D1E9 387 aaKnown RBP12.69□□□□□ -0.38
SNORD3C-201ENST00000580533 LRRIQ3A6PVS8 624 aaPredicted RBP12.69□□□□□ -0.38
SNORD3C-201ENST00000580533 POMCP01189 267 aa12.69□□□□□ -0.38
SNORD3C-201ENST00000580533 P4HA1P13674 534 aa12.69□□□□□ -0.38
SNORD3C-201ENST00000580533 LAG3P18627 525 aa12.69□□□□□ -0.38
SNORD3C-201ENST00000580533 CLCN1P35523 988 aa12.69□□□□□ -0.38
SNORD3C-201ENST00000580533 PPM1AP35813 382 aa12.69□□□□□ -0.38
SNORD3C-201ENST00000580533 ALDH7A1P49419 539 aaKnown RBP12.69□□□□□ -0.38
SNORD3C-201ENST00000580533 RBP5P82980 135 aa12.69□□□□□ -0.38
SNORD3C-201ENST00000580533 HTRA4P83105 476 aaPredicted RBP12.69□□□□□ -0.38
SNORD3C-201ENST00000580533 KCNH2Q12809 1159 aa12.69□□□□□ -0.38
SNORD3C-201ENST00000580533 VWA3BQ502W6 1294 aa12.69□□□□□ -0.38
SNORD3C-201ENST00000580533 TAF4BQ92750 862 aa12.69□□□□□ -0.38
SNORD3C-201ENST00000580533 SLC35C1Q96A29 364 aa12.69□□□□□ -0.38
SNORD3C-201ENST00000580533 ZNF689Q96CS4 500 aaPredicted RBP12.69□□□□□ -0.38
SNORD3C-201ENST00000580533 TRIM44Q96DX7 344 aaPredicted RBP12.69□□□□□ -0.38
SNORD3C-201ENST00000580533 BORCS6Q96GS4 357 aa12.69□□□□□ -0.38
SNORD3C-201ENST00000580533 FAM81BQ96LP2 452 aa12.69□□□□□ -0.38
SNORD3C-201ENST00000580533 ZFP42Q96MM3 310 aa12.69□□□□□ -0.38
SNORD3C-201ENST00000580533 CASD1Q96PB1 797 aa12.69□□□□□ -0.38
SNORD3C-201ENST00000580533 PPP1R10Q96QC0 940 aaKnown RBP12.69□□□□□ -0.38
SNORD3C-201ENST00000580533 DNAI2Q9GZS0 605 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms