RNA–Protein interactions for RNA: ENST00000579727.5

RARA-209, Transcript of retinoic acid receptor alpha, humanhuman

TSL 4

Gene RARA, Length 564 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-209ENST00000579727 NELFCDQ8IXH7 590 aa17.81■□□□□ 0.44
RARA-209ENST00000579727 KHSRPQ92945 711 aaKnown RBP eCLIP17.81■□□□□ 0.44
RARA-209ENST00000579727 SAAL1Q96ER3 474 aa17.81■□□□□ 0.44
RARA-209ENST00000579727 B3GALT6Q96L58 329 aa17.81■□□□□ 0.44
RARA-209ENST00000579727 COLEC11Q9BWP8 271 aa17.81■□□□□ 0.44
RARA-209ENST00000579727 PCIF1Q9H4Z3 704 aa17.81■□□□□ 0.44
RARA-209ENST00000579727 C11orf16Q9NQ32 467 aa17.81■□□□□ 0.44
RARA-209ENST00000579727 CLDND1Q9NY35 253 aa17.81■□□□□ 0.44
RARA-209ENST00000579727 CNTN3Q9P232 1028 aa17.81■□□□□ 0.44
RARA-209ENST00000579727 AGO2Q9UKV8 859 aaKnown RBP17.81■□□□□ 0.44
RARA-209ENST00000579727 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.8■□□□□ 0.44
RARA-209ENST00000579727 PVALEFA0A1B0GWK0 134 aa17.8■□□□□ 0.44
RARA-209ENST00000579727 C2CD2LO14523 706 aa17.8■□□□□ 0.44
RARA-209ENST00000579727 HOXD13P35453 343 aa17.8■□□□□ 0.44
RARA-209ENST00000579727 CLCNKBP51801 687 aa17.8■□□□□ 0.44
RARA-209ENST00000579727 SMC1AQ14683 1233 aaKnown RBP17.8■□□□□ 0.44
RARA-209ENST00000579727 ENOX2Q16206 610 aaKnown RBP17.8■□□□□ 0.44
RARA-209ENST00000579727 XKR4Q5GH76 650 aa17.8■□□□□ 0.44
RARA-209ENST00000579727 STXBP4Q6ZWJ1 553 aa17.8■□□□□ 0.44
RARA-209ENST00000579727 EPM2AIP1Q7L775 607 aaPredicted RBP17.8■□□□□ 0.44
RARA-209ENST00000579727 FMR1NBQ8N0W7 255 aaPredicted RBP17.8■□□□□ 0.44
RARA-209ENST00000579727 CBWD1Q9BRT8 395 aa17.8■□□□□ 0.44
RARA-209ENST00000579727 TLE6Q9H808 572 aa17.8■□□□□ 0.44
RARA-209ENST00000579727 UBE2ZQ9H832 354 aaPredicted RBP17.8■□□□□ 0.44
RARA-209ENST00000579727 EXOC1Q9NV70 894 aa17.8■□□□□ 0.44
RARA-209ENST00000579727 TUBGCP4Q9UGJ1 667 aa17.8■□□□□ 0.44
RARA-209ENST00000579727 CPSF3Q9UKF6 684 aaKnown RBP17.8■□□□□ 0.44
RARA-209ENST00000579727 ADAM28Q9UKQ2 775 aa17.8■□□□□ 0.44
RARA-209ENST00000579727 STYXL1Q9Y6J8 313 aa17.8■□□□□ 0.44
RARA-209ENST00000579727 CARNS1A5YM72 827 aa17.79■□□□□ 0.44
RARA-209ENST00000579727 GOLGA8IPA6NC78 632 aa17.79■□□□□ 0.44
RARA-209ENST00000579727 GOLGA8JA6NMD2 632 aa17.79■□□□□ 0.44
RARA-209ENST00000579727 LACTBL1A8MY62 500 aa17.79■□□□□ 0.44
RARA-209ENST00000579727 TADA2AO75478 443 aa17.79■□□□□ 0.44
RARA-209ENST00000579727 CXCL14O95715 111 aa17.79■□□□□ 0.44
RARA-209ENST00000579727 RPN1P04843 607 aaKnown RBP17.79■□□□□ 0.44
RARA-209ENST00000579727 PPP2R3AQ06190 1150 aa17.79■□□□□ 0.44
RARA-209ENST00000579727 LLGL2Q6P1M3 1020 aa17.79■□□□□ 0.44
RARA-209ENST00000579727 FUT10Q6P4F1 479 aa17.79■□□□□ 0.44
RARA-209ENST00000579727 HLA-CQ95604 372 aa17.79■□□□□ 0.44
RARA-209ENST00000579727 PPP2R3CQ969Q6 453 aa17.79■□□□□ 0.44
RARA-209ENST00000579727 KIF12Q96FN5 646 aa17.79■□□□□ 0.44
RARA-209ENST00000579727 HERC2P3Q9BVR0 1158 aa17.79■□□□□ 0.44
RARA-209ENST00000579727 GPR62Q9BZJ7 368 aa17.79■□□□□ 0.44
RARA-209ENST00000579727 TMEM206Q9H813 350 aa17.79■□□□□ 0.44
RARA-209ENST00000579727 RPF1Q9H9Y2 349 aaKnown RBP17.79■□□□□ 0.44
RARA-209ENST00000579727 NGRNQ9NPE2 291 aaKnown RBP17.79■□□□□ 0.44
RARA-209ENST00000579727 TTC26A0AVF1 554 aa17.78■□□□□ 0.44
RARA-209ENST00000579727 C2orf71A6NGG8 1288 aa17.78■□□□□ 0.44
RARA-209ENST00000579727 H3BQ06 376 aaPredicted RBP17.78■□□□□ 0.44
RARA-209ENST00000579727 SOD2P04179 222 aa17.78■□□□□ 0.44
RARA-209ENST00000579727 CTSAP10619 480 aa17.78■□□□□ 0.44
RARA-209ENST00000579727 KCNE1P15382 129 aa17.78■□□□□ 0.44
RARA-209ENST00000579727 KCNA5P22460 613 aa17.78■□□□□ 0.44
RARA-209ENST00000579727 GUCY2FP51841 1108 aa17.78■□□□□ 0.44
RARA-209ENST00000579727 DLX2Q07687 328 aaPredicted RBP17.78■□□□□ 0.44
RARA-209ENST00000579727 DPYDQ12882 1025 aa17.78■□□□□ 0.44
RARA-209ENST00000579727 STK4Q13043 487 aa17.78■□□□□ 0.44
RARA-209ENST00000579727 PNOCQ13519 176 aa17.78■□□□□ 0.44
RARA-209ENST00000579727 SNW1Q13573 536 aaKnown RBP17.78■□□□□ 0.44
RARA-209ENST00000579727 PTPN14Q15678 1187 aa17.78■□□□□ 0.44
RARA-209ENST00000579727 CLUL1Q15846 466 aa17.78■□□□□ 0.44
RARA-209ENST00000579727 KYAT1Q16773 422 aa17.78■□□□□ 0.44
RARA-209ENST00000579727 TMEM31Q5JXX7 168 aa17.78■□□□□ 0.44
RARA-209ENST00000579727 SLFN12LQ6IEE8 588 aa17.78■□□□□ 0.44
RARA-209ENST00000579727 ARMCX5Q6P1M9 558 aa17.78■□□□□ 0.44
RARA-209ENST00000579727 CRELD2Q6UXH1 353 aaPredicted RBP17.78■□□□□ 0.44
RARA-209ENST00000579727 ALYREFQ86V81 257 aaKnown RBP17.78■□□□□ 0.44
RARA-209ENST00000579727 KIAA0895Q8NCT3 520 aa17.78■□□□□ 0.44
RARA-209ENST00000579727 C3orf58Q8NDZ4 430 aa17.78■□□□□ 0.44
RARA-209ENST00000579727 ENGASEQ8NFI3 743 aa17.78■□□□□ 0.44
RARA-209ENST00000579727 ZNF507Q8TCN5 953 aa17.78■□□□□ 0.44
RARA-209ENST00000579727 SCFD1Q8WVM8 642 aa17.78■□□□□ 0.44
RARA-209ENST00000579727 ERCC4Q92889 916 aaPredicted RBP17.78■□□□□ 0.44
RARA-209ENST00000579727 FAM213AQ9BRX8 229 aa17.78■□□□□ 0.44
RARA-209ENST00000579727 VWA8A3KMH1 1905 aa17.78■□□□□ 0.44
RARA-209ENST00000579727 FAM86C2PA6NEL3 165 aa17.77■□□□□ 0.44
RARA-209ENST00000579727 PODXLO00592 558 aa17.77■□□□□ 0.44
RARA-209ENST00000579727 EIF3DO15371 548 aaKnown RBP eCLIP17.77■□□□□ 0.44
RARA-209ENST00000579727 TBX10O75333 385 aa17.77■□□□□ 0.44
RARA-209ENST00000579727 GLP2RO95838 553 aa17.77■□□□□ 0.44
RARA-209ENST00000579727 FAM160A1Q05DH4 1040 aa17.77■□□□□ 0.44
RARA-209ENST00000579727 DUSP6Q16828 381 aa17.77■□□□□ 0.44
RARA-209ENST00000579727 JADE1Q6IE81 842 aa17.77■□□□□ 0.44
RARA-209ENST00000579727 PDE12Q6L8Q7 609 aaKnown RBP17.77■□□□□ 0.44
RARA-209ENST00000579727 RNF168Q8IYW5 571 aaPredicted RBP17.77■□□□□ 0.44
RARA-209ENST00000579727 MRPL43Q8N983 215 aaKnown RBP17.77■□□□□ 0.44
RARA-209ENST00000579727 VN1R2Q8NFZ6 395 aa17.77■□□□□ 0.44
RARA-209ENST00000579727 PABPC5Q96DU9 382 aaKnown RBP17.77■□□□□ 0.44
RARA-209ENST00000579727 SLC38A7Q9NVC3 462 aa17.77■□□□□ 0.44
RARA-209ENST00000579727 BARX2Q9UMQ3 279 aaPredicted RBP17.77■□□□□ 0.44
RARA-209ENST00000579727 SF3B1O75533 1304 aaKnown RBP eCLIP17.76■□□□□ 0.43
RARA-209ENST00000579727 PLXNA3P51805 1871 aa17.76■□□□□ 0.43
RARA-209ENST00000579727 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.76■□□□□ 0.43
RARA-209ENST00000579727 I3L4J1 428 aa17.76■□□□□ 0.43
RARA-209ENST00000579727 CLIC2O15247 247 aa17.76■□□□□ 0.43
RARA-209ENST00000579727 B3GAT3O94766 335 aa17.76■□□□□ 0.43
RARA-209ENST00000579727 EFEMP2O95967 443 aa17.76■□□□□ 0.43
RARA-209ENST00000579727 URODP06132 367 aa17.76■□□□□ 0.43
RARA-209ENST00000579727 NFICP08651 508 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms