RNA–Protein interactions for RNA: ENST00000579061.5

SS18-212, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-212ENST00000579061 PI4K2BG5E9Z4 385 aa16.2■□□□□ 0.18
SS18-212ENST00000579061 OGTO15294 1046 aa16.2■□□□□ 0.18
SS18-212ENST00000579061 PPP1R37O75864 691 aa16.2■□□□□ 0.18
SS18-212ENST00000579061 GLUD1P00367 558 aa16.2■□□□□ 0.18
SS18-212ENST00000579061 HARSP12081 509 aaKnown RBP16.2■□□□□ 0.18
SS18-212ENST00000579061 RPL9P32969 192 aaKnown RBP16.2■□□□□ 0.18
SS18-212ENST00000579061 CLCNKBP51801 687 aa16.2■□□□□ 0.18
SS18-212ENST00000579061 E2F4Q16254 413 aa16.2■□□□□ 0.18
SS18-212ENST00000579061 AXDND1Q5T1B0 1012 aaPredicted RBP16.2■□□□□ 0.18
SS18-212ENST00000579061 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.2■□□□□ 0.18
SS18-212ENST00000579061 SFR1Q86XK3 245 aa16.2■□□□□ 0.18
SS18-212ENST00000579061 PDILTQ8N807 584 aa16.2■□□□□ 0.18
SS18-212ENST00000579061 HASPINQ8TF76 798 aa16.2■□□□□ 0.18
SS18-212ENST00000579061 RIN2Q8WYP3 895 aaPredicted RBP16.2■□□□□ 0.18
SS18-212ENST00000579061 PIK3R5Q8WYR1 880 aa16.2■□□□□ 0.18
SS18-212ENST00000579061 RIPOR3Q96MK2 946 aa16.2■□□□□ 0.18
SS18-212ENST00000579061 ZMAT2Q96NC0 199 aaKnown RBP16.2■□□□□ 0.18
SS18-212ENST00000579061 TSPAN18Q96SJ8 248 aa16.2■□□□□ 0.18
SS18-212ENST00000579061 TTPALQ9BTX7 342 aa16.2■□□□□ 0.18
SS18-212ENST00000579061 STRA6Q9BX79 667 aa16.2■□□□□ 0.18
SS18-212ENST00000579061 PANK2Q9BZ23 570 aa16.2■□□□□ 0.18
SS18-212ENST00000579061 SFXN1Q9H9B4 322 aa16.2■□□□□ 0.18
SS18-212ENST00000579061 OLFML3Q9NRN5 406 aa16.2■□□□□ 0.18
SS18-212ENST00000579061 A0A0B4J269 797 aa16.19■□□□□ 0.18
SS18-212ENST00000579061 TTC26A0AVF1 554 aa16.19■□□□□ 0.18
SS18-212ENST00000579061 MEFVO15553 781 aaPredicted RBP16.19■□□□□ 0.18
SS18-212ENST00000579061 TRAPPC3O43617 180 aa16.19■□□□□ 0.18
SS18-212ENST00000579061 B3GAT3O94766 335 aa16.19■□□□□ 0.18
SS18-212ENST00000579061 ADRB2P07550 413 aa16.19■□□□□ 0.18
SS18-212ENST00000579061 ALADP13716 330 aa16.19■□□□□ 0.18
SS18-212ENST00000579061 SOX4Q06945 474 aaPredicted RBP16.19■□□□□ 0.18
SS18-212ENST00000579061 ALCAMQ13740 583 aa16.19■□□□□ 0.18
SS18-212ENST00000579061 RTP2Q5QGT7 225 aa16.19■□□□□ 0.18
SS18-212ENST00000579061 RARS2Q5T160 578 aaKnown RBP16.19■□□□□ 0.18
SS18-212ENST00000579061 FAM171A1Q5VUB5 890 aa16.19■□□□□ 0.18
SS18-212ENST00000579061 SLFN12LQ6IEE8 588 aa16.19■□□□□ 0.18
SS18-212ENST00000579061 SHC4Q6S5L8 630 aa16.19■□□□□ 0.18
SS18-212ENST00000579061 CYP26C1Q6V0L0 522 aa16.19■□□□□ 0.18
SS18-212ENST00000579061 CD302Q8IX05 232 aa16.19■□□□□ 0.18
SS18-212ENST00000579061 IQUBQ8NA54 791 aa16.19■□□□□ 0.18
SS18-212ENST00000579061 CMASQ8NFW8 434 aaPredicted RBP16.19■□□□□ 0.18
SS18-212ENST00000579061 B3GALT6Q96L58 329 aa16.19■□□□□ 0.18
SS18-212ENST00000579061 APOL5Q9BWW9 433 aa16.19■□□□□ 0.18
SS18-212ENST00000579061 RHOBTB2Q9BYZ6 727 aa16.19■□□□□ 0.18
SS18-212ENST00000579061 TNMDQ9H2S6 317 aa16.19■□□□□ 0.18
SS18-212ENST00000579061 PLEKHA4Q9H4M7 779 aa16.19■□□□□ 0.18
SS18-212ENST00000579061 KBTBD4Q9NVX7 518 aa16.19■□□□□ 0.18
SS18-212ENST00000579061 RCOR1Q9UKL0 485 aa16.19■□□□□ 0.18
SS18-212ENST00000579061 STYXL1Q9Y6J8 313 aa16.19■□□□□ 0.18
SS18-212ENST00000579061 TCHHQ07283 1943 aa16.18■□□□□ 0.18
SS18-212ENST00000579061 FAM189A1O60320 539 aa16.18■□□□□ 0.18
SS18-212ENST00000579061 PAPLNO95428 1278 aa16.18■□□□□ 0.18
SS18-212ENST00000579061 CXCL8P10145 99 aa16.18■□□□□ 0.18
SS18-212ENST00000579061 FGFR3P22607 806 aa16.18■□□□□ 0.18
SS18-212ENST00000579061 AMPD3Q01432 767 aa16.18■□□□□ 0.18
SS18-212ENST00000579061 POU5F1Q01860 360 aaKnown RBP16.18■□□□□ 0.18
SS18-212ENST00000579061 DNM1Q05193 864 aaKnown RBP16.18■□□□□ 0.18
SS18-212ENST00000579061 FOXD4L6Q3SYB3 417 aaPredicted RBP16.18■□□□□ 0.18
SS18-212ENST00000579061 SEZ6Q53EL9 994 aa16.18■□□□□ 0.18
SS18-212ENST00000579061 ZC2HC1CQ53FD0 456 aaPredicted RBP16.18■□□□□ 0.18
SS18-212ENST00000579061 ATAT1Q5SQI0 421 aa16.18■□□□□ 0.18
SS18-212ENST00000579061 SLC39A4Q6P5W5 647 aa16.18■□□□□ 0.18
SS18-212ENST00000579061 CD300LGQ6UXG3 332 aa16.18■□□□□ 0.18
SS18-212ENST00000579061 FOXD4L3Q6VB84 417 aaPredicted RBP16.18■□□□□ 0.18
SS18-212ENST00000579061 C15orf39Q6ZRI6 1047 aa16.18■□□□□ 0.18
SS18-212ENST00000579061 LNX1Q8TBB1 728 aaPredicted RBP16.18■□□□□ 0.18
SS18-212ENST00000579061 KHSRPQ92945 711 aaKnown RBP eCLIP16.18■□□□□ 0.183e-7■■■■□ 20.8
SS18-212ENST00000579061 MSTO1Q9BUK6 570 aa16.18■□□□□ 0.18
SS18-212ENST00000579061 EPHX3Q9H6B9 360 aa16.18■□□□□ 0.18
SS18-212ENST00000579061 MRPL44Q9H9J2 332 aaKnown RBP16.18■□□□□ 0.18
SS18-212ENST00000579061 MAGEF1Q9HAY2 307 aa16.18■□□□□ 0.18
SS18-212ENST00000579061 GOLGA2P5Q9HBQ8 144 aa16.18■□□□□ 0.18
SS18-212ENST00000579061 PCDHA7Q9UN72 937 aa16.18■□□□□ 0.18
SS18-212ENST00000579061 EXOC7Q9UPT5 735 aa16.18■□□□□ 0.18
SS18-212ENST00000579061 PCDHB13Q9Y5F0 798 aa16.18■□□□□ 0.18
SS18-212ENST00000579061 C2orf16Q68DN1 1984 aa16.18■□□□□ 0.18
SS18-212ENST00000579061 ANK1P16157 1881 aa16.18■□□□□ 0.18
SS18-212ENST00000579061 DENND4AQ7Z401 1863 aa16.18■□□□□ 0.18
SS18-212ENST00000579061 PODXLO00592 558 aa16.17■□□□□ 0.18
SS18-212ENST00000579061 XPOTO43592 962 aaKnown RBP16.17■□□□□ 0.18
SS18-212ENST00000579061 DCXO43602 365 aa16.17■□□□□ 0.18
SS18-212ENST00000579061 IDEP14735 1019 aa16.17■□□□□ 0.18
SS18-212ENST00000579061 CYP3A5P20815 502 aa16.17■□□□□ 0.18
SS18-212ENST00000579061 ME1P48163 572 aa16.17■□□□□ 0.18
SS18-212ENST00000579061 PPP2R3AQ06190 1150 aa16.17■□□□□ 0.18
SS18-212ENST00000579061 POSTNQ15063 836 aa16.17■□□□□ 0.18
SS18-212ENST00000579061 PSMD5Q16401 504 aa16.17■□□□□ 0.18
SS18-212ENST00000579061 HERC4Q5GLZ8 1057 aaPredicted RBP16.17■□□□□ 0.18
SS18-212ENST00000579061 CNNM4Q6P4Q7 775 aa16.17■□□□□ 0.18
SS18-212ENST00000579061 LILRA6Q6PI73 481 aa16.17■□□□□ 0.18
SS18-212ENST00000579061 PRSS55Q6UWB4 352 aaPredicted RBP16.17■□□□□ 0.18
SS18-212ENST00000579061 GPR149Q86SP6 731 aa16.17■□□□□ 0.18
SS18-212ENST00000579061 CEP57Q86XR8 500 aa16.17■□□□□ 0.18
SS18-212ENST00000579061 RNF135Q8IUD6 432 aa16.17■□□□□ 0.18
SS18-212ENST00000579061 CCDC65Q8IXS2 484 aa16.17■□□□□ 0.18
SS18-212ENST00000579061 C12orf76Q8N812 135 aaPredicted RBP16.17■□□□□ 0.18
SS18-212ENST00000579061 C3orf58Q8NDZ4 430 aa16.17■□□□□ 0.18
SS18-212ENST00000579061 PYM1Q9BRP8 204 aaKnown RBP16.17■□□□□ 0.18
SS18-212ENST00000579061 RPF1Q9H9Y2 349 aaKnown RBP16.17■□□□□ 0.18
SS18-212ENST00000579061 MAN1C1Q9NR34 630 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms