RNA–Protein interactions for RNA: ENST00000578733.5

CDK5RAP3-210, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 578 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-210ENST00000578733 SHHQ15465 462 aa12.22□□□□□ -0.45
CDK5RAP3-210ENST00000578733 NOMO2Q5JPE7 1267 aa12.22□□□□□ -0.45
CDK5RAP3-210ENST00000578733 SPOUT1Q5T280 376 aaKnown RBP12.22□□□□□ -0.45
CDK5RAP3-210ENST00000578733 RASIP1Q5U651 963 aa12.22□□□□□ -0.45
CDK5RAP3-210ENST00000578733 FAM117BQ6P1L5 589 aa12.22□□□□□ -0.45
CDK5RAP3-210ENST00000578733 CRELD2Q6UXH1 353 aaPredicted RBP12.22□□□□□ -0.45
CDK5RAP3-210ENST00000578733 LRRC55Q6ZSA7 311 aa12.22□□□□□ -0.45
CDK5RAP3-210ENST00000578733 CBWD2Q8IUF1 395 aa12.22□□□□□ -0.45
CDK5RAP3-210ENST00000578733 WDR49Q8IV35 697 aa12.22□□□□□ -0.45
CDK5RAP3-210ENST00000578733 HERC6Q8IVU3 1022 aa12.22□□□□□ -0.45
CDK5RAP3-210ENST00000578733 CMTR2Q8IYT2 770 aaKnown RBP12.22□□□□□ -0.45
CDK5RAP3-210ENST00000578733 BEST2Q8NFU1 509 aa12.22□□□□□ -0.45
CDK5RAP3-210ENST00000578733 TMC2Q8TDI7 906 aa12.22□□□□□ -0.45
CDK5RAP3-210ENST00000578733 CNOT6LQ96LI5 555 aaKnown RBP12.22□□□□□ -0.45
CDK5RAP3-210ENST00000578733 MFSD14AQ96MC6 490 aa12.22□□□□□ -0.45
CDK5RAP3-210ENST00000578733 GAD1Q99259 594 aa12.22□□□□□ -0.45
CDK5RAP3-210ENST00000578733 CDX2Q99626 313 aaPredicted RBP12.22□□□□□ -0.45
CDK5RAP3-210ENST00000578733 RNF39Q9H2S5 420 aa12.22□□□□□ -0.45
CDK5RAP3-210ENST00000578733 KLK14Q9P0G3 267 aa12.22□□□□□ -0.45
CDK5RAP3-210ENST00000578733 CXXC1Q9P0U4 656 aaPredicted RBP12.22□□□□□ -0.45
CDK5RAP3-210ENST00000578733 UBQLN1Q9UMX0 589 aaKnown RBP12.22□□□□□ -0.45
CDK5RAP3-210ENST00000578733 C2CD2Q9Y426 696 aa12.22□□□□□ -0.45
CDK5RAP3-210ENST00000578733 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.21□□□□□ -0.45
CDK5RAP3-210ENST00000578733 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.21□□□□□ -0.45
CDK5RAP3-210ENST00000578733 TTC26A0AVF1 554 aa12.21□□□□□ -0.45
CDK5RAP3-210ENST00000578733 LACTBL1A8MY62 500 aa12.21□□□□□ -0.45
CDK5RAP3-210ENST00000578733 INPPL1O15357 1258 aa12.21□□□□□ -0.45
CDK5RAP3-210ENST00000578733 N4BP1O75113 896 aaKnown RBP12.21□□□□□ -0.45
CDK5RAP3-210ENST00000578733 OFD1O75665 1012 aa12.21□□□□□ -0.45
CDK5RAP3-210ENST00000578733 ADRB2P07550 413 aa12.21□□□□□ -0.45
CDK5RAP3-210ENST00000578733 DLATP10515 647 aaKnown RBP12.21□□□□□ -0.45
CDK5RAP3-210ENST00000578733 FGFR1P11362 822 aa12.21□□□□□ -0.45
CDK5RAP3-210ENST00000578733 KCNE1P15382 129 aa12.21□□□□□ -0.45
CDK5RAP3-210ENST00000578733 CYP3A5P20815 502 aa12.21□□□□□ -0.45
CDK5RAP3-210ENST00000578733 MTIF2P46199 727 aaKnown RBP12.21□□□□□ -0.45
CDK5RAP3-210ENST00000578733 CASP4P49662 377 aa12.21□□□□□ -0.45
CDK5RAP3-210ENST00000578733 VAMP7P51809 220 aa12.21□□□□□ -0.45
CDK5RAP3-210ENST00000578733 MARSP56192 900 aaKnown RBP12.21□□□□□ -0.45
CDK5RAP3-210ENST00000578733 CETN1Q12798 172 aa12.21□□□□□ -0.45
CDK5RAP3-210ENST00000578733 BTG3Q14201 252 aaPredicted RBP12.21□□□□□ -0.45
CDK5RAP3-210ENST00000578733 DUOXA2Q1HG44 320 aa12.21□□□□□ -0.45
CDK5RAP3-210ENST00000578733 SLC10A6Q3KNW5 377 aa12.21□□□□□ -0.45
CDK5RAP3-210ENST00000578733 XKR4Q5GH76 650 aa12.21□□□□□ -0.45
CDK5RAP3-210ENST00000578733 CLLU1OSQ5K130 101 aa12.21□□□□□ -0.45
CDK5RAP3-210ENST00000578733 ZBTB41Q5SVQ8 909 aa12.21□□□□□ -0.45
CDK5RAP3-210ENST00000578733 C9orf50Q5SZB4 431 aa12.21□□□□□ -0.45
CDK5RAP3-210ENST00000578733 TCERG1LQ5VWI1 586 aa12.21□□□□□ -0.45
CDK5RAP3-210ENST00000578733 TMEM192Q8IY95 271 aa12.21□□□□□ -0.45
CDK5RAP3-210ENST00000578733 CCDC127Q96BQ5 260 aa12.21□□□□□ -0.45
CDK5RAP3-210ENST00000578733 KIF12Q96FN5 646 aa12.21□□□□□ -0.45
CDK5RAP3-210ENST00000578733 UROC1Q96N76 676 aa12.21□□□□□ -0.45
CDK5RAP3-210ENST00000578733 MED15Q96RN5 788 aa12.21□□□□□ -0.45
CDK5RAP3-210ENST00000578733 RAD9AQ99638 391 aa12.21□□□□□ -0.45
CDK5RAP3-210ENST00000578733 CGRRF1Q99675 332 aa12.21□□□□□ -0.45
CDK5RAP3-210ENST00000578733 AAASQ9NRG9 546 aa12.21□□□□□ -0.45
CDK5RAP3-210ENST00000578733 RWDD3Q9Y3V2 267 aa12.21□□□□□ -0.45
CDK5RAP3-210ENST00000578733 SMIM28A0A1B0GU29 152 aa12.2□□□□□ -0.46
CDK5RAP3-210ENST00000578733 KCNJ18B7U540 433 aa12.2□□□□□ -0.46
CDK5RAP3-210ENST00000578733 POMCP01189 267 aa12.2□□□□□ -0.46
CDK5RAP3-210ENST00000578733 GTF2H1P32780 548 aa12.2□□□□□ -0.46
CDK5RAP3-210ENST00000578733 SCNN1GP51170 649 aa12.2□□□□□ -0.46
CDK5RAP3-210ENST00000578733 SMAD3P84022 425 aaKnown RBP12.2□□□□□ -0.46
CDK5RAP3-210ENST00000578733 TUSC3Q13454 348 aa12.2□□□□□ -0.46
CDK5RAP3-210ENST00000578733 KCNJ12Q14500 433 aa12.2□□□□□ -0.46
CDK5RAP3-210ENST00000578733 RAB30Q15771 203 aa12.2□□□□□ -0.46
CDK5RAP3-210ENST00000578733 DCAF17Q5H9S7 520 aaPredicted RBP12.2□□□□□ -0.46
CDK5RAP3-210ENST00000578733 JADE1Q6IE81 842 aa12.2□□□□□ -0.46
CDK5RAP3-210ENST00000578733 ALKAL1Q6UXT8 129 aa12.2□□□□□ -0.46
CDK5RAP3-210ENST00000578733 DHX40Q8IX18 779 aaKnown RBP12.2□□□□□ -0.46
CDK5RAP3-210ENST00000578733 CRIPAKQ8N1N5 446 aa12.2□□□□□ -0.46
CDK5RAP3-210ENST00000578733 FIBCD1Q8N539 461 aa12.2□□□□□ -0.46
CDK5RAP3-210ENST00000578733 ZSWIM2Q8NEG5 633 aa12.2□□□□□ -0.46
CDK5RAP3-210ENST00000578733 PARD3BQ8TEW8 1205 aa12.2□□□□□ -0.46
CDK5RAP3-210ENST00000578733 EEF2KMTQ96G04 330 aa12.2□□□□□ -0.46
CDK5RAP3-210ENST00000578733 ZFP42Q96MM3 310 aa12.2□□□□□ -0.46
CDK5RAP3-210ENST00000578733 CASD1Q96PB1 797 aa12.2□□□□□ -0.46
CDK5RAP3-210ENST00000578733 TMEM175Q9BSA9 504 aa12.2□□□□□ -0.46
CDK5RAP3-210ENST00000578733 CBX8Q9HC52 389 aa12.2□□□□□ -0.46
CDK5RAP3-210ENST00000578733 MSRAQ9UJ68 235 aa12.2□□□□□ -0.46
CDK5RAP3-210ENST00000578733 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.2□□□□□ -0.46
CDK5RAP3-210ENST00000578733 SCN1AP35498 2009 aa12.2□□□□□ -0.46
CDK5RAP3-210ENST00000578733 TMEM265A0A087WTH1 108 aa12.19□□□□□ -0.46
CDK5RAP3-210ENST00000578733 MEIS3P2A8K0S8 358 aa12.19□□□□□ -0.46
CDK5RAP3-210ENST00000578733 PHACTR2O75167 634 aa12.19□□□□□ -0.46
CDK5RAP3-210ENST00000578733 CLSTN1O94985 981 aa12.19□□□□□ -0.46
CDK5RAP3-210ENST00000578733 LAG3P18627 525 aa12.19□□□□□ -0.46
CDK5RAP3-210ENST00000578733 PAX3P23760 479 aa12.19□□□□□ -0.46
CDK5RAP3-210ENST00000578733 HTRA4P83105 476 aaPredicted RBP12.19□□□□□ -0.46
CDK5RAP3-210ENST00000578733 TFAMQ00059 246 aaKnown RBP12.19□□□□□ -0.46
CDK5RAP3-210ENST00000578733 BIRC3Q13489 604 aa12.19□□□□□ -0.46
CDK5RAP3-210ENST00000578733 IQCB1Q15051 598 aa12.19□□□□□ -0.46
CDK5RAP3-210ENST00000578733 MAN2A1Q16706 1144 aa12.19□□□□□ -0.46
CDK5RAP3-210ENST00000578733 FILIP1LQ4L180 1135 aa12.19□□□□□ -0.46
CDK5RAP3-210ENST00000578733 PAN2Q504Q3 1202 aaKnown RBP12.19□□□□□ -0.46
CDK5RAP3-210ENST00000578733 GLRA4Q5JXX5 417 aa12.19□□□□□ -0.46
CDK5RAP3-210ENST00000578733 CCDC150Q8NCX0 1101 aa12.19□□□□□ -0.46
CDK5RAP3-210ENST00000578733 ZNF689Q96CS4 500 aaPredicted RBP12.19□□□□□ -0.46
CDK5RAP3-210ENST00000578733 DDX27Q96GQ7 796 aaKnown RBP12.19□□□□□ -0.46
CDK5RAP3-210ENST00000578733 ZNF560Q96MR9 790 aa12.19□□□□□ -0.46
CDK5RAP3-210ENST00000578733 PPP1R10Q96QC0 940 aaKnown RBP12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms