RNA–Protein interactions for RNA: ENST00000578345.1

TMEM220-203, Transcript of transmembrane protein 220, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TMEM220, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM220-203ENST00000578345 TLR9Q9NR96 1032 aa18.9■□□□□ 0.62
TMEM220-203ENST00000578345 CNTN3Q9P232 1028 aa18.9■□□□□ 0.62
TMEM220-203ENST00000578345 CPSF3Q9UKF6 684 aaKnown RBP18.9■□□□□ 0.62
TMEM220-203ENST00000578345 PRG3Q9Y2Y8 225 aaPredicted RBP18.9■□□□□ 0.62
TMEM220-203ENST00000578345 KIAA1671Q9BY89 1806 aa18.9■□□□□ 0.62
TMEM220-203ENST00000578345 TISP43B9A030 160 aa18.89■□□□□ 0.61
TMEM220-203ENST00000578345 TADA2AO75478 443 aa18.89■□□□□ 0.61
TMEM220-203ENST00000578345 COL9A1P20849 921 aa18.89■□□□□ 0.61
TMEM220-203ENST00000578345 ADSSP30520 456 aa18.89■□□□□ 0.61
TMEM220-203ENST00000578345 TNFSF9P41273 254 aa18.89■□□□□ 0.61
TMEM220-203ENST00000578345 ACOT2P49753 483 aa18.89■□□□□ 0.61
TMEM220-203ENST00000578345 TMC7Q7Z402 723 aa18.89■□□□□ 0.61
TMEM220-203ENST00000578345 DDX53Q86TM3 631 aaKnown RBP18.89■□□□□ 0.61
TMEM220-203ENST00000578345 NOC3LQ8WTT2 800 aaKnown RBP18.89■□□□□ 0.61
TMEM220-203ENST00000578345 PPP1R10Q96QC0 940 aaKnown RBP18.89■□□□□ 0.61
TMEM220-203ENST00000578345 ASB7Q9H672 318 aa18.89■□□□□ 0.61
TMEM220-203ENST00000578345 NGRNQ9NPE2 291 aaKnown RBP18.89■□□□□ 0.61
TMEM220-203ENST00000578345 TTC26A0AVF1 554 aa18.88■□□□□ 0.61
TMEM220-203ENST00000578345 CASTOR2A6NHX0 329 aa18.88■□□□□ 0.61
TMEM220-203ENST00000578345 LACTBL1A8MY62 500 aa18.88■□□□□ 0.61
TMEM220-203ENST00000578345 TULP1O00294 542 aaPredicted RBP18.88■□□□□ 0.61
TMEM220-203ENST00000578345 EXTL3O43909 919 aa18.88■□□□□ 0.61
TMEM220-203ENST00000578345 IL18RAPO95256 599 aa18.88■□□□□ 0.61
TMEM220-203ENST00000578345 ENOX2Q16206 610 aaKnown RBP18.88■□□□□ 0.61
TMEM220-203ENST00000578345 GPD1LQ8N335 351 aa18.88■□□□□ 0.61
TMEM220-203ENST00000578345 KIAA0895Q8NCT3 520 aa18.88■□□□□ 0.61
TMEM220-203ENST00000578345 KIF12Q96FN5 646 aa18.88■□□□□ 0.61
TMEM220-203ENST00000578345 FAM213AQ9BRX8 229 aa18.88■□□□□ 0.61
TMEM220-203ENST00000578345 IKZF4Q9H2S9 585 aa18.88■□□□□ 0.61
TMEM220-203ENST00000578345 PCIF1Q9H4Z3 704 aa18.88■□□□□ 0.61
TMEM220-203ENST00000578345 NSUN3Q9H649 340 aaKnown RBP18.88■□□□□ 0.61
TMEM220-203ENST00000578345 UBE2ZQ9H832 354 aaPredicted RBP18.88■□□□□ 0.61
TMEM220-203ENST00000578345 ENTPD7Q9NQZ7 604 aa18.88■□□□□ 0.61
TMEM220-203ENST00000578345 UBQLN1Q9UMX0 589 aaKnown RBP18.88■□□□□ 0.61
TMEM220-203ENST00000578345 SSX2IPQ9Y2D8 614 aa18.88■□□□□ 0.61
TMEM220-203ENST00000578345 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.87■□□□□ 0.61
TMEM220-203ENST00000578345 NCK2O43639 380 aa18.87■□□□□ 0.61
TMEM220-203ENST00000578345 FAM189A1O60320 539 aa18.87■□□□□ 0.61
TMEM220-203ENST00000578345 TRIOO75962 3097 aa18.87■□□□□ 0.61
TMEM220-203ENST00000578345 RPL9P32969 192 aaKnown RBP18.87■□□□□ 0.61
TMEM220-203ENST00000578345 HOXD13P35453 343 aa18.87■□□□□ 0.61
TMEM220-203ENST00000578345 TRIP11Q15643 1979 aa18.87■□□□□ 0.61
TMEM220-203ENST00000578345 DCLRE1AQ6PJP8 1040 aa18.87■□□□□ 0.61
TMEM220-203ENST00000578345 VPS52Q8N1B4 723 aa18.87■□□□□ 0.61
TMEM220-203ENST00000578345 KHSRPQ92945 711 aaKnown RBP eCLIP18.87■□□□□ 0.61
TMEM220-203ENST00000578345 SAAL1Q96ER3 474 aa18.87■□□□□ 0.61
TMEM220-203ENST00000578345 TCF25Q9BQ70 676 aa18.87■□□□□ 0.61
TMEM220-203ENST00000578345 CBWD1Q9BRT8 395 aa18.87■□□□□ 0.61
TMEM220-203ENST00000578345 AGPAT3Q9NRZ7 376 aa18.87■□□□□ 0.61
TMEM220-203ENST00000578345 DERAQ9Y315 318 aa18.87■□□□□ 0.61
TMEM220-203ENST00000578345 PCDHA5Q9Y5H7 936 aa18.87■□□□□ 0.61
TMEM220-203ENST00000578345 ZNF233A6NK53 670 aa18.86■□□□□ 0.61
TMEM220-203ENST00000578345 PDXKO00764 312 aa18.86■□□□□ 0.61
TMEM220-203ENST00000578345 TGFB1I1O43294 461 aa18.86■□□□□ 0.61
TMEM220-203ENST00000578345 TRAPPC3O43617 180 aa18.86■□□□□ 0.61
TMEM220-203ENST00000578345 CALUO43852 315 aaPredicted RBP18.86■□□□□ 0.61
TMEM220-203ENST00000578345 B4GALT3O60512 393 aa18.86■□□□□ 0.61
TMEM220-203ENST00000578345 CSPG5O95196 566 aa18.86■□□□□ 0.61
TMEM220-203ENST00000578345 ADRB2P07550 413 aa18.86■□□□□ 0.61
TMEM220-203ENST00000578345 CYP3A5P20815 502 aa18.86■□□□□ 0.61
TMEM220-203ENST00000578345 DNAJB1P25685 340 aa18.86■□□□□ 0.61
TMEM220-203ENST00000578345 CA8P35219 290 aa18.86■□□□□ 0.61
TMEM220-203ENST00000578345 ELAVL2Q12926 359 aaKnown RBP18.86■□□□□ 0.61
TMEM220-203ENST00000578345 SMC1AQ14683 1233 aaKnown RBP18.86■□□□□ 0.61
TMEM220-203ENST00000578345 SURF1Q15526 300 aa18.86■□□□□ 0.61
TMEM220-203ENST00000578345 NAB2Q15742 525 aa18.86■□□□□ 0.61
TMEM220-203ENST00000578345 ZBTB41Q5SVQ8 909 aa18.86■□□□□ 0.61
TMEM220-203ENST00000578345 NT5DC4Q86YG4 428 aa18.86■□□□□ 0.61
TMEM220-203ENST00000578345 GUF1Q8N442 669 aaKnown RBP18.86■□□□□ 0.61
TMEM220-203ENST00000578345 BEST2Q8NFU1 509 aa18.86■□□□□ 0.61
TMEM220-203ENST00000578345 CACTINQ8WUQ7 758 aaKnown RBP18.86■□□□□ 0.61
TMEM220-203ENST00000578345 ZMAT2Q96NC0 199 aaKnown RBP18.86■□□□□ 0.61
TMEM220-203ENST00000578345 CXCL16Q9H2A7 254 aa18.86■□□□□ 0.61
TMEM220-203ENST00000578345 CD320Q9NPF0 282 aa18.86■□□□□ 0.61
TMEM220-203ENST00000578345 HSPBP1Q9NZL4 362 aa18.86■□□□□ 0.61
TMEM220-203ENST00000578345 ADAM28Q9UKQ2 775 aa18.86■□□□□ 0.61
TMEM220-203ENST00000578345 FSD2A1L4K1 749 aa18.85■□□□□ 0.61
TMEM220-203ENST00000578345 GOLGA8IPA6NC78 632 aa18.85■□□□□ 0.61
TMEM220-203ENST00000578345 GOLGA8JA6NMD2 632 aa18.85■□□□□ 0.61
TMEM220-203ENST00000578345 CLIC2O15247 247 aa18.85■□□□□ 0.61
TMEM220-203ENST00000578345 B3GAT3O94766 335 aa18.85■□□□□ 0.61
TMEM220-203ENST00000578345 CXCL14O95715 111 aa18.85■□□□□ 0.61
TMEM220-203ENST00000578345 STIM1Q13586 685 aa18.85■□□□□ 0.61
TMEM220-203ENST00000578345 TMEM132DQ14C87 1099 aa18.85■□□□□ 0.61
TMEM220-203ENST00000578345 ZNF658Q5TYW1 1059 aaPredicted RBP18.85■□□□□ 0.61
TMEM220-203ENST00000578345 KIAA1841Q6NSI8 718 aa18.85■□□□□ 0.61
TMEM220-203ENST00000578345 CRELD2Q6UXH1 353 aaPredicted RBP18.85■□□□□ 0.61
TMEM220-203ENST00000578345 C12orf56Q8IXR9 622 aa18.85■□□□□ 0.61
TMEM220-203ENST00000578345 XXYLT1Q8NBI6 393 aa18.85■□□□□ 0.61
TMEM220-203ENST00000578345 SPATA20Q8TB22 786 aa18.85■□□□□ 0.61
TMEM220-203ENST00000578345 RBAKQ9NYW8 714 aaPredicted RBP18.85■□□□□ 0.61
TMEM220-203ENST00000578345 SF3B1O75533 1304 aaKnown RBP eCLIP18.84■□□□□ 0.61
TMEM220-203ENST00000578345 EXOC3O60645 756 aa18.84■□□□□ 0.61
TMEM220-203ENST00000578345 SOD2P04179 222 aa18.84■□□□□ 0.61
TMEM220-203ENST00000578345 CTSAP10619 480 aa18.84■□□□□ 0.61
TMEM220-203ENST00000578345 KCNA5P22460 613 aa18.84■□□□□ 0.61
TMEM220-203ENST00000578345 PPP1R2P41236 205 aa18.84■□□□□ 0.61
TMEM220-203ENST00000578345 CYP2J2P51589 502 aa18.84■□□□□ 0.61
TMEM220-203ENST00000578345 CLCNKBP51801 687 aa18.84■□□□□ 0.61
TMEM220-203ENST00000578345 ERVFC1P60507 584 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms