RNA–Protein interactions for RNA: ENST00000578112.5

SMARCE1-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,384 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-214ENST00000578112 PTPN2P17706 415 aa12.36□□□□□ -0.43
SMARCE1-214ENST00000578112 NRLP54845 237 aa12.36□□□□□ -0.43
SMARCE1-214ENST00000578112 PDIA5Q14554 519 aa12.36□□□□□ -0.43
SMARCE1-214ENST00000578112 AXDND1Q5T1B0 1012 aaPredicted RBP12.36□□□□□ -0.43
SMARCE1-214ENST00000578112 SUMF1Q8NBK3 374 aa12.36□□□□□ -0.43
SMARCE1-214ENST00000578112 FEZF2Q8TBJ5 459 aa12.36□□□□□ -0.43
SMARCE1-214ENST00000578112 PIGOQ8TEQ8 1089 aa12.36□□□□□ -0.43
SMARCE1-214ENST00000578112 CCDC94Q9BW85 323 aaPredicted RBP12.36□□□□□ -0.43
SMARCE1-214ENST00000578112 RAB34Q9BZG1 259 aa12.36□□□□□ -0.43
SMARCE1-214ENST00000578112 GPR88Q9GZN0 384 aa12.36□□□□□ -0.43
SMARCE1-214ENST00000578112 DLL3Q9NYJ7 618 aa12.36□□□□□ -0.43
SMARCE1-214ENST00000578112 KLK14Q9P0G3 267 aa12.36□□□□□ -0.43
SMARCE1-214ENST00000578112 VWA8A3KMH1 1905 aa12.36□□□□□ -0.43
SMARCE1-214ENST00000578112 BTBD18B2RXH4 712 aa12.35□□□□□ -0.43
SMARCE1-214ENST00000578112 LAD1O00515 517 aa12.35□□□□□ -0.43
SMARCE1-214ENST00000578112 SLC26A4O43511 780 aa12.35□□□□□ -0.43
SMARCE1-214ENST00000578112 FOXD2O60548 495 aaPredicted RBP12.35□□□□□ -0.43
SMARCE1-214ENST00000578112 ABLIM3O94929 683 aa12.35□□□□□ -0.43
SMARCE1-214ENST00000578112 KCNE1P15382 129 aa12.35□□□□□ -0.43
SMARCE1-214ENST00000578112 UPP1Q16831 310 aa12.35□□□□□ -0.43
SMARCE1-214ENST00000578112 ZBTB41Q5SVQ8 909 aa12.35□□□□□ -0.43
SMARCE1-214ENST00000578112 ATF7IP2Q5U623 682 aa12.35□□□□□ -0.43
SMARCE1-214ENST00000578112 PARM1Q6UWI2 310 aa12.35□□□□□ -0.43
SMARCE1-214ENST00000578112 NPAS3Q8IXF0 933 aa12.35□□□□□ -0.43
SMARCE1-214ENST00000578112 TCEAL8Q8IYN2 117 aa12.35□□□□□ -0.43
SMARCE1-214ENST00000578112 ZBTB44Q8NCP5 570 aa12.35□□□□□ -0.43
SMARCE1-214ENST00000578112 EPC1Q9H2F5 836 aa12.35□□□□□ -0.43
SMARCE1-214ENST00000578112 COL4A2P08572 1712 aa12.35□□□□□ -0.43
SMARCE1-214ENST00000578112 FAM205CA6NFA0 338 aa12.35□□□□□ -0.43
SMARCE1-214ENST00000578112 CASTOR2A6NHX0 329 aa12.35□□□□□ -0.43
SMARCE1-214ENST00000578112 F8W810 466 aa12.35□□□□□ -0.43
SMARCE1-214ENST00000578112 MED24O75448 989 aa12.35□□□□□ -0.43
SMARCE1-214ENST00000578112 SPATA31D3P0C874 917 aa12.35□□□□□ -0.43
SMARCE1-214ENST00000578112 MCF2P10911 925 aa12.35□□□□□ -0.43
SMARCE1-214ENST00000578112 GPC5P78333 572 aa12.35□□□□□ -0.43
SMARCE1-214ENST00000578112 PLD1Q13393 1074 aa12.35□□□□□ -0.43
SMARCE1-214ENST00000578112 POTEGQ6S5H5 508 aa12.35□□□□□ -0.43
SMARCE1-214ENST00000578112 ZNF852Q6ZMS4 543 aa12.35□□□□□ -0.43
SMARCE1-214ENST00000578112 SPATA31D4Q6ZUB0 917 aa12.35□□□□□ -0.43
SMARCE1-214ENST00000578112 DGLUCYQ7Z3D6 616 aa12.35□□□□□ -0.43
SMARCE1-214ENST00000578112 ZNF461Q8TAF7 563 aa12.35□□□□□ -0.43
SMARCE1-214ENST00000578112 SLC7A14Q8TBB6 771 aa12.35□□□□□ -0.43
SMARCE1-214ENST00000578112 DEPDC1BQ8WUY9 529 aa12.35□□□□□ -0.43
SMARCE1-214ENST00000578112 FGF14Q92915 247 aa12.35□□□□□ -0.43
SMARCE1-214ENST00000578112 TRPV4Q9HBA0 871 aa12.35□□□□□ -0.43
SMARCE1-214ENST00000578112 NOL7Q9UMY1 257 aaKnown RBP12.35□□□□□ -0.43
SMARCE1-214ENST00000578112 LRP3O75074 770 aa12.34□□□□□ -0.43
SMARCE1-214ENST00000578112 RPL17P18621 184 aaKnown RBP12.34□□□□□ -0.43
SMARCE1-214ENST00000578112 KYAT1Q16773 422 aa12.34□□□□□ -0.43
SMARCE1-214ENST00000578112 ME3Q16798 604 aa12.34□□□□□ -0.43
SMARCE1-214ENST00000578112 ALKAL1Q6UXT8 129 aa12.34□□□□□ -0.43
SMARCE1-214ENST00000578112 MAML2Q8IZL2 1156 aaPredicted RBP12.34□□□□□ -0.43
SMARCE1-214ENST00000578112 B3GALT6Q96L58 329 aa12.34□□□□□ -0.43
SMARCE1-214ENST00000578112 MRPL4Q9BYD3 311 aaKnown RBP12.34□□□□□ -0.43
SMARCE1-214ENST00000578112 DNMT3BQ9UBC3 853 aaKnown RBP12.34□□□□□ -0.43
SMARCE1-214ENST00000578112 MRPS23Q9Y3D9 190 aaKnown RBP12.34□□□□□ -0.43
SMARCE1-214ENST00000578112 POTEMA6NI47 508 aa12.34□□□□□ -0.43
SMARCE1-214ENST00000578112 CCL16O15467 120 aa12.34□□□□□ -0.43
SMARCE1-214ENST00000578112 LRG1P02750 347 aa12.34□□□□□ -0.43
SMARCE1-214ENST00000578112 ELF1P32519 619 aa12.34□□□□□ -0.43
SMARCE1-214ENST00000578112 OR1D2P34982 312 aa12.34□□□□□ -0.43
SMARCE1-214ENST00000578112 HMGN5P82970 282 aaKnown RBP12.34□□□□□ -0.43
SMARCE1-214ENST00000578112 PLCB2Q00722 1185 aa12.34□□□□□ -0.43
SMARCE1-214ENST00000578112 LMNB2Q03252 620 aa12.34□□□□□ -0.43
SMARCE1-214ENST00000578112 MRPL58Q14197 206 aaKnown RBP12.34□□□□□ -0.43
SMARCE1-214ENST00000578112 PRSS36Q5K4E3 855 aa12.34□□□□□ -0.43
SMARCE1-214ENST00000578112 CEP57Q86XR8 500 aa12.34□□□□□ -0.43
SMARCE1-214ENST00000578112 ELMOD1Q8N336 334 aa12.34□□□□□ -0.43
SMARCE1-214ENST00000578112 DRC1Q96MC2 740 aa12.34□□□□□ -0.43
SMARCE1-214ENST00000578112 GPRC5CQ9NQ84 441 aa12.34□□□□□ -0.43
SMARCE1-214ENST00000578112 SPATA6Q9NWH7 488 aaPredicted RBP12.34□□□□□ -0.43
SMARCE1-214ENST00000578112 PDCD11Q14690 1871 aaKnown RBP12.33□□□□□ -0.44
SMARCE1-214ENST00000578112 H0YCG3 227 aa12.33□□□□□ -0.44
SMARCE1-214ENST00000578112 FGF19O95750 216 aa12.33□□□□□ -0.44
SMARCE1-214ENST00000578112 DCNP07585 359 aaKnown RBP12.33□□□□□ -0.44
SMARCE1-214ENST00000578112 EPHA5P54756 1037 aa12.33□□□□□ -0.44
SMARCE1-214ENST00000578112 NT5DC1Q5TFE4 455 aa12.33□□□□□ -0.44
SMARCE1-214ENST00000578112 APPL2Q8NEU8 664 aa12.33□□□□□ -0.44
SMARCE1-214ENST00000578112 BSNDQ8WZ55 320 aa12.33□□□□□ -0.44
SMARCE1-214ENST00000578112 TMEM60Q9H2L4 133 aa12.33□□□□□ -0.44
SMARCE1-214ENST00000578112 PTPRHQ9HD43 1115 aa12.33□□□□□ -0.44
SMARCE1-214ENST00000578112 CNTN3Q9P232 1028 aa12.33□□□□□ -0.44
SMARCE1-214ENST00000578112 K7ERI5 159 aa12.33□□□□□ -0.44
SMARCE1-214ENST00000578112 B3GAT3O94766 335 aa12.33□□□□□ -0.44
SMARCE1-214ENST00000578112 PAPSS2O95340 614 aaPredicted RBP12.33□□□□□ -0.44
SMARCE1-214ENST00000578112 ATF2P15336 505 aa12.33□□□□□ -0.44
SMARCE1-214ENST00000578112 CD300LGQ6UXG3 332 aa12.33□□□□□ -0.44
SMARCE1-214ENST00000578112 ATRIPQ8WXE1 791 aa12.33□□□□□ -0.44
SMARCE1-214ENST00000578112 PAAF1Q9BRP4 392 aa12.33□□□□□ -0.44
SMARCE1-214ENST00000578112 LARP6Q9BRS8 491 aaKnown RBP12.33□□□□□ -0.44
SMARCE1-214ENST00000578112 GJB4Q9NTQ9 266 aa12.33□□□□□ -0.44
SMARCE1-214ENST00000578112 KCND2Q9NZV8 630 aa12.33□□□□□ -0.44
SMARCE1-214ENST00000578112 HSFX1Q9UBD0 423 aa12.33□□□□□ -0.44
SMARCE1-214ENST00000578112 CDY1Q9Y6F8 540 aa12.33□□□□□ -0.44
SMARCE1-214ENST00000578112 R4GN57 208 aa12.33□□□□□ -0.44
SMARCE1-214ENST00000578112 FAM170BA6NMN3 283 aa12.32□□□□□ -0.44
SMARCE1-214ENST00000578112 RHOP08100 348 aa12.32□□□□□ -0.44
SMARCE1-214ENST00000578112 PROZP22891 400 aa12.32□□□□□ -0.44
SMARCE1-214ENST00000578112 WEE1P30291 646 aa12.32□□□□□ -0.44
SMARCE1-214ENST00000578112 ABCD1P33897 745 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms