RNA–Protein interactions for RNA: ENST00000578049.3

SEC22B-201, Transcript of SEC22 homolog B, vesicle trafficking protein (gene/pseudogene), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22B, Length 6,922 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22B-201ENST00000578049 SLC8A2Q9UPR5 921 aa11.31□□□□□ -0.6
SEC22B-201ENST00000578049 TMEM94Q12767 1356 aa11.31□□□□□ -0.6
SEC22B-201ENST00000578049 B2RBV5 119 aa11.3□□□□□ -0.6
SEC22B-201ENST00000578049 PPP1R3GB7ZBB8 358 aa11.3□□□□□ -0.6
SEC22B-201ENST00000578049 KITP10721 976 aa11.3□□□□□ -0.6
SEC22B-201ENST00000578049 FDPSP14324 419 aaKnown RBP11.3□□□□□ -0.6
SEC22B-201ENST00000578049 PRDX5P30044 214 aa11.3□□□□□ -0.6
SEC22B-201ENST00000578049 SEC24CP53992 1094 aa11.3□□□□□ -0.6
SEC22B-201ENST00000578049 FOXO4P98177 505 aa11.3□□□□□ -0.6
SEC22B-201ENST00000578049 KBTBD12Q3ZCT8 623 aa11.3□□□□□ -0.6
SEC22B-201ENST00000578049 CCNJLQ8IV13 435 aa11.3□□□□□ -0.6
SEC22B-201ENST00000578049 TERB1Q8NA31 727 aa11.3□□□□□ -0.6
SEC22B-201ENST00000578049 ACTRT1Q8TDG2 376 aa11.3□□□□□ -0.6
SEC22B-201ENST00000578049 SCFD1Q8WVM8 642 aa11.3□□□□□ -0.6
SEC22B-201ENST00000578049 C18orf8Q96DM3 657 aa11.3□□□□□ -0.6
SEC22B-201ENST00000578049 DACH2Q96NX9 599 aa11.3□□□□□ -0.6
SEC22B-201ENST00000578049 CFAP65Q6ZU64 1925 aaKnown RBP11.3□□□□□ -0.6
SEC22B-201ENST00000578049 PI4K2BG5E9Z4 385 aa11.3□□□□□ -0.6
SEC22B-201ENST00000578049 CYP27B1O15528 508 aa11.3□□□□□ -0.6
SEC22B-201ENST00000578049 MTSS1O43312 755 aa11.3□□□□□ -0.6
SEC22B-201ENST00000578049 NQO1P15559 274 aaKnown RBP11.3□□□□□ -0.6
SEC22B-201ENST00000578049 SPRP35270 261 aaPredicted RBP11.3□□□□□ -0.6
SEC22B-201ENST00000578049 KDSRQ06136 332 aa11.3□□□□□ -0.6
SEC22B-201ENST00000578049 ZNF568Q3ZCX4 644 aa11.3□□□□□ -0.6
SEC22B-201ENST00000578049 BARGINQ6ZT62 677 aa11.3□□□□□ -0.6
SEC22B-201ENST00000578049 SLC13A1Q9BZW2 595 aa11.3□□□□□ -0.6
SEC22B-201ENST00000578049 RSAD1Q9HA92 442 aa11.3□□□□□ -0.6
SEC22B-201ENST00000578049 RBAKQ9NYW8 714 aaPredicted RBP11.3□□□□□ -0.6
SEC22B-201ENST00000578049 AIPL1Q9NZN9 384 aa11.3□□□□□ -0.6
SEC22B-201ENST00000578049 ALG6Q9Y672 507 aa11.3□□□□□ -0.6
SEC22B-201ENST00000578049 CRB1P82279 1406 aa11.3□□□□□ -0.6
SEC22B-201ENST00000578049 A0A0A6YYK5 440 aaPredicted RBP11.3□□□□□ -0.6
SEC22B-201ENST00000578049 GOLGA8TH3BQL2 631 aa11.3□□□□□ -0.6
SEC22B-201ENST00000578049 M0QYV0 167 aa11.3□□□□□ -0.6
SEC22B-201ENST00000578049 DGAT1O75907 488 aa11.3□□□□□ -0.6
SEC22B-201ENST00000578049 ADRA2BP18089 450 aa11.3□□□□□ -0.6
SEC22B-201ENST00000578049 NUP107P57740 925 aa11.3□□□□□ -0.6
SEC22B-201ENST00000578049 APOL6Q9BWW8 343 aa11.3□□□□□ -0.6
SEC22B-201ENST00000578049 HACD3Q9P035 362 aa11.3□□□□□ -0.6
SEC22B-201ENST00000578049 AGO2Q9UKV8 859 aaKnown RBP11.3□□□□□ -0.6
SEC22B-201ENST00000578049 RPS6KA4O75676 772 aa11.3□□□□□ -0.6
SEC22B-201ENST00000578049 WLSQ5T9L3 541 aa11.3□□□□□ -0.6
SEC22B-201ENST00000578049 LRRC8EQ6NSJ5 796 aa11.3□□□□□ -0.6
SEC22B-201ENST00000578049 GPBP1L1Q9HC44 474 aaPredicted RBP11.3□□□□□ -0.6
SEC22B-201ENST00000578049 HECW2Q9P2P5 1572 aa11.3□□□□□ -0.6
SEC22B-201ENST00000578049 AP4S1Q9Y587 144 aa11.3□□□□□ -0.6
SEC22B-201ENST00000578049 A0A1B0GW55 424 aa11.3□□□□□ -0.6
SEC22B-201ENST00000578049 CES2O00748 559 aa11.3□□□□□ -0.6
SEC22B-201ENST00000578049 ENO1P06733 434 aaKnown RBP11.3□□□□□ -0.6
SEC22B-201ENST00000578049 DUX4L2P0CJ85 424 aa11.3□□□□□ -0.6
SEC22B-201ENST00000578049 DUX4L3P0CJ86 424 aa11.3□□□□□ -0.6
SEC22B-201ENST00000578049 DUX4L4P0CJ87 422 aa11.3□□□□□ -0.6
SEC22B-201ENST00000578049 DUX4L5P0CJ88 424 aa11.3□□□□□ -0.6
SEC22B-201ENST00000578049 DUX4L6P0CJ89 424 aa11.3□□□□□ -0.6
SEC22B-201ENST00000578049 DUX4L7P0CJ90 424 aa11.3□□□□□ -0.6
SEC22B-201ENST00000578049 CYP2D6P10635 497 aa11.3□□□□□ -0.6
SEC22B-201ENST00000578049 SERPINB3P29508 390 aa11.3□□□□□ -0.6
SEC22B-201ENST00000578049 FAM102AQ5T9C2 384 aaPredicted RBP11.3□□□□□ -0.6
SEC22B-201ENST00000578049 MIGA2Q7L4E1 593 aa11.3□□□□□ -0.6
SEC22B-201ENST00000578049 CCDC90BQ9GZT6 254 aa11.3□□□□□ -0.6
SEC22B-201ENST00000578049 NBPF3Q9H094 633 aa11.3□□□□□ -0.6
SEC22B-201ENST00000578049 DUX4Q9UBX2 424 aa11.3□□□□□ -0.6
SEC22B-201ENST00000578049 HERC5Q9UII4 1024 aaKnown RBP11.3□□□□□ -0.6
SEC22B-201ENST00000578049 PCDHA10Q9Y5I2 948 aa11.3□□□□□ -0.6
SEC22B-201ENST00000578049 SLC4A7Q9Y6M7 1214 aa11.3□□□□□ -0.6
SEC22B-201ENST00000578049 USP17L10C9JJH3 530 aa11.3□□□□□ -0.6
SEC22B-201ENST00000578049 STRNO43815 780 aa11.3□□□□□ -0.6
SEC22B-201ENST00000578049 GH2P01242 217 aa11.3□□□□□ -0.6
SEC22B-201ENST00000578049 KRT8P05787 483 aa11.3□□□□□ -0.6
SEC22B-201ENST00000578049 KLRC1P26715 233 aa11.3□□□□□ -0.6
SEC22B-201ENST00000578049 SPDYCQ5MJ68 293 aa11.3□□□□□ -0.6
SEC22B-201ENST00000578049 DPP9Q86TI2 863 aa11.3□□□□□ -0.6
SEC22B-201ENST00000578049 ZNF555Q8NEP9 628 aa11.3□□□□□ -0.6
SEC22B-201ENST00000578049 ZNF560Q96MR9 790 aa11.3□□□□□ -0.6
SEC22B-201ENST00000578049 TMBIM4Q9HC24 238 aa11.3□□□□□ -0.6
SEC22B-201ENST00000578049 NPHS2Q9NP85 383 aa11.3□□□□□ -0.6
SEC22B-201ENST00000578049 PTPRUQ92729 1446 aa11.29□□□□□ -0.6
SEC22B-201ENST00000578049 ANP32DO95626 131 aa11.29□□□□□ -0.6
SEC22B-201ENST00000578049 KLHDC7AQ5VTJ3 777 aa11.29□□□□□ -0.6
SEC22B-201ENST00000578049 CATSPER4Q7RTX7 472 aa11.29□□□□□ -0.6
SEC22B-201ENST00000578049 JADE3Q92613 823 aa11.29□□□□□ -0.6
SEC22B-201ENST00000578049 MAGEB18Q96M61 343 aa11.29□□□□□ -0.6
SEC22B-201ENST00000578049 CNPY3Q9BT09 278 aa11.29□□□□□ -0.6
SEC22B-201ENST00000578049 CD209Q9NNX6 404 aa11.29□□□□□ -0.6
SEC22B-201ENST00000578049 ZNF711Q9Y462 761 aa11.29□□□□□ -0.6
SEC22B-201ENST00000578049 NPHP4O75161 1426 aaPredicted RBP11.29□□□□□ -0.6
SEC22B-201ENST00000578049 MYO1DO94832 1006 aa11.29□□□□□ -0.6
SEC22B-201ENST00000578049 LONRF1Q17RB8 773 aa11.29□□□□□ -0.6
SEC22B-201ENST00000578049 DCPSQ96C86 337 aaKnown RBP11.29□□□□□ -0.6
SEC22B-201ENST00000578049 PNKPQ96T60 521 aa11.29□□□□□ -0.6
SEC22B-201ENST00000578049 TRIM54Q9BYV2 358 aa11.29□□□□□ -0.6
SEC22B-201ENST00000578049 HOXC10Q9NYD6 342 aa11.29□□□□□ -0.6
SEC22B-201ENST00000578049 USP21Q9UK80 565 aa11.29□□□□□ -0.6
SEC22B-201ENST00000578049 MUTP22033 750 aa11.29□□□□□ -0.6
SEC22B-201ENST00000578049 STIP1P31948 543 aaKnown RBP11.29□□□□□ -0.6
SEC22B-201ENST00000578049 PRAMEP78395 509 aa11.29□□□□□ -0.6
SEC22B-201ENST00000578049 IMPG1Q17R60 797 aa11.29□□□□□ -0.6
SEC22B-201ENST00000578049 DSTYKQ6XUX3 929 aa11.29□□□□□ -0.6
SEC22B-201ENST00000578049 SPDYE1Q8NFV5 336 aaPredicted RBP11.29□□□□□ -0.6
SEC22B-201ENST00000578049 MS4A14Q96JA4 679 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms