RNA–Protein interactions for RNA: ENST00000577827.5

PTPRM-205, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 2

Gene PTPRM, Length 4,640 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-205ENST00000577827 TFRCP02786 760 aaKnown RBP10.96□□□□□ -0.66
PTPRM-205ENST00000577827 CTCFP49711 727 aaPredicted RBP10.96□□□□□ -0.66
PTPRM-205ENST00000577827 SNAP25P60880 206 aa10.96□□□□□ -0.66
PTPRM-205ENST00000577827 POTEAQ6S8J7 498 aa10.96□□□□□ -0.66
PTPRM-205ENST00000577827 MIGA2Q7L4E1 593 aa10.96□□□□□ -0.66
PTPRM-205ENST00000577827 PODNQ7Z5L7 613 aa10.96□□□□□ -0.66
PTPRM-205ENST00000577827 EPS8L3Q8TE67 593 aaKnown RBP10.96□□□□□ -0.66
PTPRM-205ENST00000577827 RPF1Q9H9Y2 349 aaKnown RBP10.96□□□□□ -0.66
PTPRM-205ENST00000577827 WDR35Q9P2L0 1181 aa10.96□□□□□ -0.66
PTPRM-205ENST00000577827 BAG5Q9UL15 447 aa10.96□□□□□ -0.66
PTPRM-205ENST00000577827 C15orf41Q9Y2V0 281 aa10.96□□□□□ -0.66
PTPRM-205ENST00000577827 UBAP1LF5GYI3 381 aa10.96□□□□□ -0.66
PTPRM-205ENST00000577827 CAMTA2O94983 1202 aa10.96□□□□□ -0.66
PTPRM-205ENST00000577827 NTSR2O95665 410 aa10.96□□□□□ -0.66
PTPRM-205ENST00000577827 FAM153BP0C7A2 387 aa10.96□□□□□ -0.66
PTPRM-205ENST00000577827 MCF2P10911 925 aa10.96□□□□□ -0.66
PTPRM-205ENST00000577827 PIGHQ14442 188 aaPredicted RBP10.96□□□□□ -0.66
PTPRM-205ENST00000577827 FAM153CQ494X1 144 aa10.96□□□□□ -0.66
PTPRM-205ENST00000577827 LVRNQ6Q4G3 990 aa10.96□□□□□ -0.66
PTPRM-205ENST00000577827 DTX3LQ8TDB6 740 aa10.96□□□□□ -0.66
PTPRM-205ENST00000577827 TEKT4Q8WW24 435 aa10.96□□□□□ -0.66
PTPRM-205ENST00000577827 HEXIM2Q96MH2 286 aaKnown RBP10.96□□□□□ -0.66
PTPRM-205ENST00000577827 MED10Q9BTT4 135 aa10.96□□□□□ -0.66
PTPRM-205ENST00000577827 JMJD4Q9H9V9 463 aa10.96□□□□□ -0.66
PTPRM-205ENST00000577827 MRGBPQ9NV56 204 aa10.96□□□□□ -0.66
PTPRM-205ENST00000577827 FAM153AQ9UHL3 310 aa10.96□□□□□ -0.66
PTPRM-205ENST00000577827 PHTF1Q9UMS5 762 aa10.96□□□□□ -0.66
PTPRM-205ENST00000577827 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.96□□□□□ -0.66
PTPRM-205ENST00000577827 ECM2O94769 699 aaPredicted RBP10.95□□□□□ -0.66
PTPRM-205ENST00000577827 BCAR1P56945 870 aa10.95□□□□□ -0.66
PTPRM-205ENST00000577827 DNAJC3Q13217 504 aa10.95□□□□□ -0.66
PTPRM-205ENST00000577827 MYBPC2Q14324 1141 aa10.95□□□□□ -0.66
PTPRM-205ENST00000577827 ZNF699Q32M78 642 aa10.95□□□□□ -0.66
PTPRM-205ENST00000577827 HP1BP3Q5SSJ5 553 aaPredicted RBP10.95□□□□□ -0.66
PTPRM-205ENST00000577827 SESTD1Q86VW0 696 aa10.95□□□□□ -0.66
PTPRM-205ENST00000577827 C1orf131Q8NDD1 294 aaKnown RBP10.95□□□□□ -0.66
PTPRM-205ENST00000577827 CCDC138Q96M89 665 aa10.95□□□□□ -0.66
PTPRM-205ENST00000577827 TMEM8AQ9HCN3 771 aa10.95□□□□□ -0.66
PTPRM-205ENST00000577827 SIK3Q9Y2K2 1263 aa10.95□□□□□ -0.66
PTPRM-205ENST00000577827 IVNS1ABPQ9Y6Y0 642 aa10.95□□□□□ -0.66
PTPRM-205ENST00000577827 FAM205AQ6ZU69 1335 aa10.95□□□□□ -0.66
PTPRM-205ENST00000577827 ZFXP17010 805 aaPredicted RBP10.95□□□□□ -0.66
PTPRM-205ENST00000577827 PSMC1P62191 440 aaKnown RBP10.95□□□□□ -0.66
PTPRM-205ENST00000577827 THOC5Q13769 683 aaKnown RBP10.95□□□□□ -0.66
PTPRM-205ENST00000577827 EARS2Q5JPH6 523 aaKnown RBP10.95□□□□□ -0.66
PTPRM-205ENST00000577827 KLC3Q6P597 504 aa10.95□□□□□ -0.66
PTPRM-205ENST00000577827 DHX38Q92620 1227 aaKnown RBP10.95□□□□□ -0.66
PTPRM-205ENST00000577827 TATDN2Q93075 761 aa10.95□□□□□ -0.66
PTPRM-205ENST00000577827 EIF4E1BA6NMX2 242 aaKnown RBP10.95□□□□□ -0.66
PTPRM-205ENST00000577827 SLC37A4O43826 429 aa10.95□□□□□ -0.66
PTPRM-205ENST00000577827 APOEP02649 317 aa10.95□□□□□ -0.66
PTPRM-205ENST00000577827 KITP10721 976 aa10.95□□□□□ -0.66
PTPRM-205ENST00000577827 NPR1P16066 1061 aa10.95□□□□□ -0.66
PTPRM-205ENST00000577827 ZNF200P98182 395 aaPredicted RBP10.95□□□□□ -0.66
PTPRM-205ENST00000577827 DDR1Q08345 913 aa10.95□□□□□ -0.66
PTPRM-205ENST00000577827 WASHC2DQ5SRD0 308 aa10.95□□□□□ -0.66
PTPRM-205ENST00000577827 WDR59Q6PJI9 974 aa10.95□□□□□ -0.66
PTPRM-205ENST00000577827 FOXR2Q6PJQ5 311 aa10.95□□□□□ -0.66
PTPRM-205ENST00000577827 CATSPER3Q86XQ3 398 aa10.95□□□□□ -0.66
PTPRM-205ENST00000577827 C18orf8Q96DM3 657 aa10.95□□□□□ -0.66
PTPRM-205ENST00000577827 CDC42EP4Q9H3Q1 356 aaKnown RBP10.95□□□□□ -0.66
PTPRM-205ENST00000577827 MANSC1Q9H8J5 431 aa10.95□□□□□ -0.66
PTPRM-205ENST00000577827 B2RBV5 119 aa10.94□□□□□ -0.66
PTPRM-205ENST00000577827 ENO1P06733 434 aaKnown RBP10.94□□□□□ -0.66
PTPRM-205ENST00000577827 TAC1P20366 129 aa10.94□□□□□ -0.66
PTPRM-205ENST00000577827 GEMIN4P57678 1058 aaKnown RBP10.94□□□□□ -0.66
PTPRM-205ENST00000577827 ITGB3BPQ13352 177 aaPredicted RBP10.94□□□□□ -0.66
PTPRM-205ENST00000577827 ZKSCAN4Q969J2 545 aaPredicted RBP10.94□□□□□ -0.66
PTPRM-205ENST00000577827 VPS39Q96JC1 886 aa10.94□□□□□ -0.66
PTPRM-205ENST00000577827 FAM167AQ96KS9 214 aa10.94□□□□□ -0.66
PTPRM-205ENST00000577827 SLC13A1Q9BZW2 595 aa10.94□□□□□ -0.66
PTPRM-205ENST00000577827 TMEM117Q9H0C3 514 aa10.94□□□□□ -0.66
PTPRM-205ENST00000577827 DBNDD1Q9H9R9 158 aa10.94□□□□□ -0.66
PTPRM-205ENST00000577827 AGPAT3Q9NRZ7 376 aa10.94□□□□□ -0.66
PTPRM-205ENST00000577827 ZSCAN5CA6NGD5 496 aaPredicted RBP10.94□□□□□ -0.66
PTPRM-205ENST00000577827 GOLGA8CPA6NN73 597 aa10.94□□□□□ -0.66
PTPRM-205ENST00000577827 BTNL10A8MVZ5 291 aa10.94□□□□□ -0.66
PTPRM-205ENST00000577827 PSTPIP1O43586 416 aa10.94□□□□□ -0.66
PTPRM-205ENST00000577827 ADRA2BP18089 450 aa10.94□□□□□ -0.66
PTPRM-205ENST00000577827 RANBP1P43487 201 aa10.94□□□□□ -0.66
PTPRM-205ENST00000577827 EIF3EP60228 445 aaKnown RBP10.94□□□□□ -0.66
PTPRM-205ENST00000577827 KDSRQ06136 332 aa10.94□□□□□ -0.66
PTPRM-205ENST00000577827 STX3Q13277 289 aa10.94□□□□□ -0.66
PTPRM-205ENST00000577827 SNRNP35Q16560 246 aaKnown RBP10.94□□□□□ -0.66
PTPRM-205ENST00000577827 SCARA5Q6ZMJ2 495 aa10.94□□□□□ -0.66
PTPRM-205ENST00000577827 CCDC117Q8IWD4 279 aaPredicted RBP10.94□□□□□ -0.66
PTPRM-205ENST00000577827 SLC30A5Q8TAD4 765 aa10.94□□□□□ -0.66
PTPRM-205ENST00000577827 RMDN3Q96TC7 470 aa10.94□□□□□ -0.66
PTPRM-205ENST00000577827 FRMD8P1Q9BZ68 369 aaPredicted RBP10.94□□□□□ -0.66
PTPRM-205ENST00000577827 IL1RAPL1Q9NZN1 696 aa10.94□□□□□ -0.66
PTPRM-205ENST00000577827 ORC6Q9Y5N6 252 aa10.94□□□□□ -0.66
PTPRM-205ENST00000577827 MGEA5O60502 916 aa10.94□□□□□ -0.66
PTPRM-205ENST00000577827 FDX1P10109 184 aa10.94□□□□□ -0.66
PTPRM-205ENST00000577827 KCNMA1Q12791 1236 aa10.94□□□□□ -0.66
PTPRM-205ENST00000577827 MAPRE2Q15555 327 aa10.94□□□□□ -0.66
PTPRM-205ENST00000577827 NLRP9Q7RTR0 991 aa10.94□□□□□ -0.66
PTPRM-205ENST00000577827 ANKMY2Q8IV38 441 aa10.94□□□□□ -0.66
PTPRM-205ENST00000577827 SCFD1Q8WVM8 642 aa10.94□□□□□ -0.66
PTPRM-205ENST00000577827 ARHGEF26Q96DR7 871 aa10.94□□□□□ -0.66
PTPRM-205ENST00000577827 RIT2Q99578 217 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms