RNA–Protein interactions for RNA: ENST00000577824.5

MKS1-206, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 1,158 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-206ENST00000577824 SPATA1Q5VX52 437 aa13.78□□□□□ -0.2
MKS1-206ENST00000577824 JADE1Q6IE81 842 aa13.78□□□□□ -0.2
MKS1-206ENST00000577824 FAM117BQ6P1L5 589 aa13.78□□□□□ -0.2
MKS1-206ENST00000577824 WDR49Q8IV35 697 aa13.78□□□□□ -0.2
MKS1-206ENST00000577824 EFCAB13Q8IY85 973 aa13.78□□□□□ -0.2
MKS1-206ENST00000577824 PARD3BQ8TEW8 1205 aa13.78□□□□□ -0.2
MKS1-206ENST00000577824 NOC3LQ8WTT2 800 aaKnown RBP13.78□□□□□ -0.2
MKS1-206ENST00000577824 CGRRF1Q99675 332 aa13.78□□□□□ -0.2
MKS1-206ENST00000577824 PBX4Q9BYU1 374 aa13.78□□□□□ -0.2
MKS1-206ENST00000577824 NAT10Q9H0A0 1025 aaKnown RBP13.78□□□□□ -0.2
MKS1-206ENST00000577824 THAP9Q9H5L6 903 aa13.78□□□□□ -0.2
MKS1-206ENST00000577824 SLC38A7Q9NVC3 462 aa13.78□□□□□ -0.2
MKS1-206ENST00000577824 MIOSQ9NXC5 875 aa13.78□□□□□ -0.2
MKS1-206ENST00000577824 KLK14Q9P0G3 267 aa13.78□□□□□ -0.2
MKS1-206ENST00000577824 LCHNA4D1U4 455 aa13.77□□□□□ -0.21
MKS1-206ENST00000577824 LINC01553A4QN01 128 aa13.77□□□□□ -0.21
MKS1-206ENST00000577824 FGFR1OPO95684 399 aaKnown RBP13.77□□□□□ -0.21
MKS1-206ENST00000577824 NFICP08651 508 aa13.77□□□□□ -0.21
MKS1-206ENST00000577824 EPB41P11171 864 aaKnown RBP13.77□□□□□ -0.21
MKS1-206ENST00000577824 LRPAP1P30533 357 aa13.77□□□□□ -0.21
MKS1-206ENST00000577824 PTPRJQ12913 1337 aa13.77□□□□□ -0.21
MKS1-206ENST00000577824 TUSC3Q13454 348 aa13.77□□□□□ -0.21
MKS1-206ENST00000577824 BTG3Q14201 252 aaPredicted RBP13.77□□□□□ -0.21
MKS1-206ENST00000577824 NCAPHQ15003 741 aa13.77□□□□□ -0.21
MKS1-206ENST00000577824 GLRA4Q5JXX5 417 aa13.77□□□□□ -0.21
MKS1-206ENST00000577824 C1orf220Q5T0J3 134 aa13.77□□□□□ -0.21
MKS1-206ENST00000577824 CDKAL1Q5VV42 579 aa13.77□□□□□ -0.21
MKS1-206ENST00000577824 CEP135Q66GS9 1140 aa13.77□□□□□ -0.21
MKS1-206ENST00000577824 FRMD5Q7Z6J6 570 aa13.77□□□□□ -0.21
MKS1-206ENST00000577824 USP37Q86T82 979 aa13.77□□□□□ -0.21
MKS1-206ENST00000577824 IRF2BP1Q8IU81 584 aa13.77□□□□□ -0.21
MKS1-206ENST00000577824 COLGALT2Q8IYK4 626 aa13.77□□□□□ -0.21
MKS1-206ENST00000577824 CXorf38Q8TB03 319 aa13.77□□□□□ -0.21
MKS1-206ENST00000577824 UROC1Q96N76 676 aa13.77□□□□□ -0.21
MKS1-206ENST00000577824 TMEM175Q9BSA9 504 aa13.77□□□□□ -0.21
MKS1-206ENST00000577824 ZBED2Q9BTP6 218 aa13.77□□□□□ -0.21
MKS1-206ENST00000577824 METTL14Q9HCE5 456 aaKnown RBP13.77□□□□□ -0.21
MKS1-206ENST00000577824 PDE11AQ9HCR9 933 aa13.77□□□□□ -0.21
MKS1-206ENST00000577824 UBQLN1Q9UMX0 589 aaKnown RBP13.77□□□□□ -0.21
MKS1-206ENST00000577824 INPP5FQ9Y2H2 1132 aa13.77□□□□□ -0.21
MKS1-206ENST00000577824 YBX2Q9Y2T7 364 aaKnown RBP13.77□□□□□ -0.21
MKS1-206ENST00000577824 MRPL42Q9Y6G3 142 aaKnown RBP13.77□□□□□ -0.21
MKS1-206ENST00000577824 LRRIQ3A6PVS8 624 aaPredicted RBP13.76□□□□□ -0.21
MKS1-206ENST00000577824 C5orf67F2Z3F1 127 aa13.76□□□□□ -0.21
MKS1-206ENST00000577824 TMEM189-UBE2V1I3L0A0 370 aa13.76□□□□□ -0.21
MKS1-206ENST00000577824 XPOTO43592 962 aaKnown RBP13.76□□□□□ -0.21
MKS1-206ENST00000577824 DDHD2O94830 711 aa13.76□□□□□ -0.21
MKS1-206ENST00000577824 ARHGEF15O94989 841 aa13.76□□□□□ -0.21
MKS1-206ENST00000577824 POMCP01189 267 aa13.76□□□□□ -0.21
MKS1-206ENST00000577824 CA3P07451 260 aa13.76□□□□□ -0.21
MKS1-206ENST00000577824 LAG3P18627 525 aa13.76□□□□□ -0.21
MKS1-206ENST00000577824 IBSPP21815 317 aaPredicted RBP13.76□□□□□ -0.21
MKS1-206ENST00000577824 DNAJB2P25686 324 aa13.76□□□□□ -0.21
MKS1-206ENST00000577824 RABGGTBP53611 331 aa13.76□□□□□ -0.21
MKS1-206ENST00000577824 AP3M2P53677 418 aa13.76□□□□□ -0.21
MKS1-206ENST00000577824 SOX4Q06945 474 aaPredicted RBP13.76□□□□□ -0.21
MKS1-206ENST00000577824 TMEM132DQ14C87 1099 aa13.76□□□□□ -0.21
MKS1-206ENST00000577824 IQCB1Q15051 598 aa13.76□□□□□ -0.21
MKS1-206ENST00000577824 PAN2Q504Q3 1202 aaKnown RBP13.76□□□□□ -0.21
MKS1-206ENST00000577824 ZNF280BQ86YH2 543 aa13.76□□□□□ -0.21
MKS1-206ENST00000577824 TRIM59Q8IWR1 403 aa13.76□□□□□ -0.21
MKS1-206ENST00000577824 RDH13Q8NBN7 331 aa13.76□□□□□ -0.21
MKS1-206ENST00000577824 KIF12Q96FN5 646 aa13.76□□□□□ -0.21
MKS1-206ENST00000577824 EEF2KMTQ96G04 330 aa13.76□□□□□ -0.21
MKS1-206ENST00000577824 CNOT6LQ96LI5 555 aaKnown RBP13.76□□□□□ -0.21
MKS1-206ENST00000577824 SRRTQ9BXP5 876 aaKnown RBP13.76□□□□□ -0.21
MKS1-206ENST00000577824 HSD3B7Q9H2F3 369 aa13.76□□□□□ -0.21
MKS1-206ENST00000577824 NRDE2Q9H7Z3 1164 aa13.76□□□□□ -0.21
MKS1-206ENST00000577824 HCSTQ9UBK5 93 aa13.76□□□□□ -0.21
MKS1-206ENST00000577824 RWDD3Q9Y3V2 267 aa13.76□□□□□ -0.21
MKS1-206ENST00000577824 NFE2L3Q9Y4A8 694 aa13.76□□□□□ -0.21
MKS1-206ENST00000577824 NLRC5Q86WI3 1866 aa13.76□□□□□ -0.21
MKS1-206ENST00000577824 TRIP11Q15643 1979 aa13.75□□□□□ -0.21
MKS1-206ENST00000577824 TMEM265A0A087WTH1 108 aa13.75□□□□□ -0.21
MKS1-206ENST00000577824 ZNF18P17022 549 aa13.75□□□□□ -0.21
MKS1-206ENST00000577824 GTF2H1P32780 548 aa13.75□□□□□ -0.21
MKS1-206ENST00000577824 PBX2P40425 430 aa13.75□□□□□ -0.21
MKS1-206ENST00000577824 ZNF165P49910 485 aa13.75□□□□□ -0.21
MKS1-206ENST00000577824 VAMP7P51809 220 aa13.75□□□□□ -0.21
MKS1-206ENST00000577824 C15orf39Q6ZRI6 1047 aa13.75□□□□□ -0.21
MKS1-206ENST00000577824 DHX40Q8IX18 779 aaKnown RBP13.75□□□□□ -0.21
MKS1-206ENST00000577824 FIBCD1Q8N539 461 aa13.75□□□□□ -0.21
MKS1-206ENST00000577824 C1orf127Q8N9H9 656 aa13.75□□□□□ -0.21
MKS1-206ENST00000577824 BEST2Q8NFU1 509 aa13.75□□□□□ -0.21
MKS1-206ENST00000577824 FAM200AQ8TCP9 573 aa13.75□□□□□ -0.21
MKS1-206ENST00000577824 SLC35C1Q96A29 364 aa13.75□□□□□ -0.21
MKS1-206ENST00000577824 SAMD11Q96NU1 681 aa13.75□□□□□ -0.21
MKS1-206ENST00000577824 INTS13Q9NVM9 706 aa13.75□□□□□ -0.21
MKS1-206ENST00000577824 DNAJB4Q9UDY4 337 aa13.75□□□□□ -0.21
MKS1-206ENST00000577824 TUBGCP4Q9UGJ1 667 aa13.75□□□□□ -0.21
MKS1-206ENST00000577824 ARMCX3Q9UH62 379 aaPredicted RBP13.75□□□□□ -0.21
MKS1-206ENST00000577824 ITGA11Q9UKX5 1188 aa13.75□□□□□ -0.21
MKS1-206ENST00000577824 ANO9A1A5B4 782 aa13.74□□□□□ -0.21
MKS1-206ENST00000577824 PMM2O15305 246 aa13.74□□□□□ -0.21
MKS1-206ENST00000577824 EFEMP2O95967 443 aa13.74□□□□□ -0.21
MKS1-206ENST00000577824 DLATP10515 647 aaKnown RBP13.74□□□□□ -0.21
MKS1-206ENST00000577824 KRT13P13646 458 aa13.74□□□□□ -0.21
MKS1-206ENST00000577824 MYOGP15173 224 aa13.74□□□□□ -0.21
MKS1-206ENST00000577824 EEF1GP26641 437 aaKnown RBP13.74□□□□□ -0.21
MKS1-206ENST00000577824 DLG4P78352 724 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms