RNA–Protein interactions for RNA: ENST00000577390.5

CDH8-203, Transcript of cadherin 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH8, Length 9,721 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-203ENST00000577390 TESK2Q96S53 571 aa9.3□□□□□ -0.92
CDH8-203ENST00000577390 ARL2BPQ9Y2Y0 163 aa9.3□□□□□ -0.92
CDH8-203ENST00000577390 KCNJ18B7U540 433 aa9.3□□□□□ -0.92
CDH8-203ENST00000577390 CPA1P15085 419 aa9.3□□□□□ -0.92
CDH8-203ENST00000577390 PDX1P52945 283 aa9.3□□□□□ -0.92
CDH8-203ENST00000577390 KCNJ12Q14500 433 aa9.3□□□□□ -0.92
CDH8-203ENST00000577390 XAGE3Q8WTP9 111 aa9.3□□□□□ -0.92
CDH8-203ENST00000577390 ARL8AQ96BM9 186 aa9.3□□□□□ -0.92
CDH8-203ENST00000577390 ALKBH4Q9NXW9 302 aa9.3□□□□□ -0.92
CDH8-203ENST00000577390 RPH3AQ9Y2J0 694 aaPredicted RBP9.3□□□□□ -0.92
CDH8-203ENST00000577390 TRIM16O95361 564 aa9.3□□□□□ -0.92
CDH8-203ENST00000577390 CMA1P23946 247 aa9.3□□□□□ -0.92
CDH8-203ENST00000577390 PDIA3P30101 505 aaKnown RBP9.3□□□□□ -0.92
CDH8-203ENST00000577390 SLC39A6Q13433 755 aa9.3□□□□□ -0.92
CDH8-203ENST00000577390 CCDC153Q494R4 210 aa9.3□□□□□ -0.92
CDH8-203ENST00000577390 RBM43Q6ZSC3 357 aaKnown RBP9.3□□□□□ -0.92
CDH8-203ENST00000577390 BHMT2Q9H2M3 363 aa9.3□□□□□ -0.92
CDH8-203ENST00000577390 ENTPD7Q9NQZ7 604 aa9.3□□□□□ -0.92
CDH8-203ENST00000577390 NDOR1Q9UHB4 597 aa9.3□□□□□ -0.92
CDH8-203ENST00000577390 TBK1Q9UHD2 729 aa9.3□□□□□ -0.92
CDH8-203ENST00000577390 TTC7AQ9ULT0 858 aaPredicted RBP9.3□□□□□ -0.92
CDH8-203ENST00000577390 DNMBPQ6XZF7 1577 aa9.3□□□□□ -0.92
CDH8-203ENST00000577390 DIDO1Q9BTC0 2240 aaKnown RBP9.29□□□□□ -0.92
CDH8-203ENST00000577390 MYO1GB0I1T2 1018 aa9.29□□□□□ -0.92
CDH8-203ENST00000577390 PSMD14O00487 310 aa9.29□□□□□ -0.92
CDH8-203ENST00000577390 DAB1O75553 588 aa9.29□□□□□ -0.92
CDH8-203ENST00000577390 GNA14O95837 355 aa9.29□□□□□ -0.92
CDH8-203ENST00000577390 AP1S1P61966 158 aa9.29□□□□□ -0.92
CDH8-203ENST00000577390 PSMC6P62333 389 aa9.29□□□□□ -0.92
CDH8-203ENST00000577390 CCDC177Q9NQR7 707 aaPredicted RBP9.29□□□□□ -0.92
CDH8-203ENST00000577390 CCDC61Q9Y6R9 512 aa9.29□□□□□ -0.92
CDH8-203ENST00000577390 CYP7B1O75881 506 aa9.29□□□□□ -0.92
CDH8-203ENST00000577390 HSPA4LO95757 839 aa9.29□□□□□ -0.92
CDH8-203ENST00000577390 POLR2EP19388 210 aaKnown RBP9.29□□□□□ -0.92
CDH8-203ENST00000577390 CYP27A1Q02318 531 aa9.29□□□□□ -0.92
CDH8-203ENST00000577390 XRCC4Q13426 336 aa9.29□□□□□ -0.92
CDH8-203ENST00000577390 DOK7Q18PE1 504 aa9.29□□□□□ -0.92
CDH8-203ENST00000577390 CROCCP3Q8IVE0 287 aa9.29□□□□□ -0.92
CDH8-203ENST00000577390 CCDC60Q8IWA6 550 aaPredicted RBP9.29□□□□□ -0.92
CDH8-203ENST00000577390 PHACTR4Q8IZ21 702 aa9.29□□□□□ -0.92
CDH8-203ENST00000577390 SIK3Q9Y2K2 1263 aa9.29□□□□□ -0.92
CDH8-203ENST00000577390 FANCD2Q9BXW9 1451 aa9.29□□□□□ -0.92
CDH8-203ENST00000577390 CCND2P30279 289 aa9.29□□□□□ -0.92
CDH8-203ENST00000577390 KRT26Q7Z3Y9 468 aa9.29□□□□□ -0.92
CDH8-203ENST00000577390 RGL4Q8IZJ4 473 aa9.29□□□□□ -0.92
CDH8-203ENST00000577390 NOA1Q8NC60 698 aaKnown RBP9.29□□□□□ -0.92
CDH8-203ENST00000577390 SPIRE2Q8WWL2 714 aa9.29□□□□□ -0.92
CDH8-203ENST00000577390 BRD8Q9H0E9 1235 aa9.29□□□□□ -0.92
CDH8-203ENST00000577390 EURLQ9NYK6 297 aa9.29□□□□□ -0.92
CDH8-203ENST00000577390 ARMCX3Q9UH62 379 aaPredicted RBP9.29□□□□□ -0.92
CDH8-203ENST00000577390 PDLIM1O00151 329 aa9.29□□□□□ -0.92
CDH8-203ENST00000577390 PRAMEP78395 509 aa9.29□□□□□ -0.92
CDH8-203ENST00000577390 MPP3Q13368 585 aa9.29□□□□□ -0.92
CDH8-203ENST00000577390 ASAP3Q8TDY4 903 aa9.29□□□□□ -0.92
CDH8-203ENST00000577390 RNPC3Q96LT9 517 aaKnown RBP9.29□□□□□ -0.92
CDH8-203ENST00000577390 MUC3BQ9H195 1237 aa9.29□□□□□ -0.92
CDH8-203ENST00000577390 ADNPQ9H2P0 1102 aa9.29□□□□□ -0.92
CDH8-203ENST00000577390 SMYD3Q9H7B4 428 aa9.29□□□□□ -0.92
CDH8-203ENST00000577390 ADGRG1Q9Y653 693 aa9.29□□□□□ -0.92
CDH8-203ENST00000577390 DFFAO00273 331 aa9.29□□□□□ -0.92
CDH8-203ENST00000577390 EIF2S3P41091 472 aaKnown RBP9.29□□□□□ -0.92
CDH8-203ENST00000577390 HIRAP54198 1017 aaPredicted RBP9.29□□□□□ -0.92
CDH8-203ENST00000577390 MFSD14BQ5SR56 506 aa9.29□□□□□ -0.92
CDH8-203ENST00000577390 FUCA2Q9BTY2 467 aa9.29□□□□□ -0.92
CDH8-203ENST00000577390 PCDH18Q9HCL0 1135 aa9.29□□□□□ -0.92
CDH8-203ENST00000577390 IL2RBP14784 551 aa9.29□□□□□ -0.92
CDH8-203ENST00000577390 ITGA3P26006 1051 aa9.29□□□□□ -0.92
CDH8-203ENST00000577390 CABLES1Q8TDN4 633 aa9.29□□□□□ -0.92
CDH8-203ENST00000577390 INPP5DQ92835 1189 aa9.29□□□□□ -0.92
CDH8-203ENST00000577390 LRRC39Q96DD0 335 aa9.29□□□□□ -0.92
CDH8-203ENST00000577390 MTERF3Q96E29 417 aa9.29□□□□□ -0.92
CDH8-203ENST00000577390 PRRG4Q9BZD6 226 aa9.29□□□□□ -0.92
CDH8-203ENST00000577390 CHPF2Q9P2E5 772 aa9.29□□□□□ -0.92
CDH8-203ENST00000577390 LSM7Q9UK45 103 aaKnown RBP9.29□□□□□ -0.92
CDH8-203ENST00000577390 PSAPP07602 524 aa9.29□□□□□ -0.92
CDH8-203ENST00000577390 S100A5P33763 92 aa9.29□□□□□ -0.92
CDH8-203ENST00000577390 R3HCC1LQ7Z5L2 792 aaKnown RBP9.29□□□□□ -0.92
CDH8-203ENST00000577390 BBS7Q8IWZ6 715 aa9.29□□□□□ -0.92
CDH8-203ENST00000577390 XPO6Q96QU8 1125 aaKnown RBP9.29□□□□□ -0.92
CDH8-203ENST00000577390 RSPH9Q9H1X1 276 aaPredicted RBP9.29□□□□□ -0.92
CDH8-203ENST00000577390 GDAQ9Y2T3 454 aa9.29□□□□□ -0.92
CDH8-203ENST00000577390 NDUFA10O95299 355 aa9.28□□□□□ -0.92
CDH8-203ENST00000577390 GRIK1P39086 918 aa9.28□□□□□ -0.92
CDH8-203ENST00000577390 MYL7Q01449 175 aa9.28□□□□□ -0.92
CDH8-203ENST00000577390 AP3B2Q13367 1082 aa9.28□□□□□ -0.92
CDH8-203ENST00000577390 OLFML2AQ68BL7 652 aa9.28□□□□□ -0.92
CDH8-203ENST00000577390 COPS6Q7L5N1 327 aa9.28□□□□□ -0.92
CDH8-203ENST00000577390 DPP10Q8N608 796 aa9.28□□□□□ -0.92
CDH8-203ENST00000577390 ICA1LQ8NDH6 482 aa9.28□□□□□ -0.92
CDH8-203ENST00000577390 NEK9Q8TD19 979 aa9.28□□□□□ -0.92
CDH8-203ENST00000577390 REXO5Q96IC2 774 aaKnown RBP9.28□□□□□ -0.92
CDH8-203ENST00000577390 FMO2Q99518 471 aa9.28□□□□□ -0.92
CDH8-203ENST00000577390 NFIBO00712 420 aa9.28□□□□□ -0.92
CDH8-203ENST00000577390 RGS2P41220 211 aa9.28□□□□□ -0.92
CDH8-203ENST00000577390 RBL2Q08999 1139 aa9.28□□□□□ -0.92
CDH8-203ENST00000577390 COBLL1Q53SF7 1204 aa9.28□□□□□ -0.92
CDH8-203ENST00000577390 SPATA2LQ8IUW3 424 aaPredicted RBP9.28□□□□□ -0.92
CDH8-203ENST00000577390 NT5C3AQ9H0P0 336 aa9.28□□□□□ -0.92
CDH8-203ENST00000577390 MPP6Q9NZW5 540 aa9.28□□□□□ -0.92
CDH8-203ENST00000577390 RNF103-CHMP3A0A140T963 221 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms