RNA–Protein interactions for RNA: ENST00000576958.1

PRPF8-215, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 416 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-215ENST00000576958 HARSP12081 509 aaKnown RBP13.24□□□□□ -0.29
PRPF8-215ENST00000576958 CEBPBP17676 345 aa13.24□□□□□ -0.29
PRPF8-215ENST00000576958 PEX3P56589 373 aa13.24□□□□□ -0.29
PRPF8-215ENST00000576958 RAD51AP2Q09MP3 1159 aa13.24□□□□□ -0.29
PRPF8-215ENST00000576958 UPP1Q16831 310 aa13.24□□□□□ -0.29
PRPF8-215ENST00000576958 NPAS3Q8IXF0 933 aa13.24□□□□□ -0.29
PRPF8-215ENST00000576958 TCEAL4Q96EI5 215 aa13.24□□□□□ -0.29
PRPF8-215ENST00000576958 MCRS1Q96EZ8 462 aa13.24□□□□□ -0.29
PRPF8-215ENST00000576958 PLIN2Q99541 437 aa13.24□□□□□ -0.29
PRPF8-215ENST00000576958 TARS2Q9BW92 718 aaKnown RBP13.24□□□□□ -0.29
PRPF8-215ENST00000576958 IRF2BPLQ9H1B7 796 aa13.24□□□□□ -0.29
PRPF8-215ENST00000576958 MTRRQ9UBK8 725 aa13.24□□□□□ -0.29
PRPF8-215ENST00000576958 CDH7Q9ULB5 785 aa13.24□□□□□ -0.29
PRPF8-215ENST00000576958 MIA3Q5JRA6 1907 aa13.23□□□□□ -0.29
PRPF8-215ENST00000576958 OTOGLQ3ZCN5 2332 aa13.23□□□□□ -0.29
PRPF8-215ENST00000576958 ZMYM2Q9UBW7 1377 aa13.23□□□□□ -0.29
PRPF8-215ENST00000576958 PATJQ8NI35 1801 aa13.23□□□□□ -0.29
PRPF8-215ENST00000576958 NPHP3-ACAD11A0A0J9YXS1 232 aa13.23□□□□□ -0.29
PRPF8-215ENST00000576958 CCDC169A6NNP5 214 aa13.23□□□□□ -0.29
PRPF8-215ENST00000576958 SEC24AO95486 1093 aa13.23□□□□□ -0.29
PRPF8-215ENST00000576958 SP9P0CG40 484 aa13.23□□□□□ -0.29
PRPF8-215ENST00000576958 RFX1P22670 979 aa13.23□□□□□ -0.29
PRPF8-215ENST00000576958 CCR2P41597 374 aa13.23□□□□□ -0.29
PRPF8-215ENST00000576958 NPTX2P47972 431 aa13.23□□□□□ -0.29
PRPF8-215ENST00000576958 ARPP19P56211 112 aa13.23□□□□□ -0.29
PRPF8-215ENST00000576958 CACNB1Q02641 598 aaPredicted RBP13.23□□□□□ -0.29
PRPF8-215ENST00000576958 SPAG1Q07617 926 aa13.23□□□□□ -0.29
PRPF8-215ENST00000576958 RAB33AQ14088 237 aa13.23□□□□□ -0.29
PRPF8-215ENST00000576958 LIN9Q5TKA1 542 aa13.23□□□□□ -0.29
PRPF8-215ENST00000576958 CYP26C1Q6V0L0 522 aa13.23□□□□□ -0.29
PRPF8-215ENST00000576958 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.23□□□□□ -0.29
PRPF8-215ENST00000576958 FBXO18Q8NFZ0 1043 aa13.23□□□□□ -0.29
PRPF8-215ENST00000576958 PJA1Q8NG27 643 aa13.23□□□□□ -0.29
PRPF8-215ENST00000576958 SNX29Q8TEQ0 813 aa13.23□□□□□ -0.29
PRPF8-215ENST00000576958 ACO2Q99798 780 aaKnown RBP13.23□□□□□ -0.29
PRPF8-215ENST00000576958 HAPLN2Q9GZV7 340 aa13.23□□□□□ -0.29
PRPF8-215ENST00000576958 C2orf40Q9H1Z8 148 aa13.23□□□□□ -0.29
PRPF8-215ENST00000576958 PTPRHQ9HD43 1115 aa13.23□□□□□ -0.29
PRPF8-215ENST00000576958 SLC2A4RGQ9NR83 387 aa13.23□□□□□ -0.29
PRPF8-215ENST00000576958 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.23□□□□□ -0.29
PRPF8-215ENST00000576958 LRWD1Q9UFC0 647 aa13.23□□□□□ -0.29
PRPF8-215ENST00000576958 SIT1Q9Y3P8 196 aa13.23□□□□□ -0.29
PRPF8-215ENST00000576958 FANCMQ8IYD8 2048 aa13.22□□□□□ -0.29
PRPF8-215ENST00000576958 WDR27A2RRH5 827 aa13.22□□□□□ -0.29
PRPF8-215ENST00000576958 SLC16A4O15374 487 aa13.22□□□□□ -0.29
PRPF8-215ENST00000576958 GJA1P17302 382 aa13.22□□□□□ -0.29
PRPF8-215ENST00000576958 HOXC13P31276 330 aa13.22□□□□□ -0.29
PRPF8-215ENST00000576958 FXR2P51116 673 aaKnown RBP eCLIP13.22□□□□□ -0.293e-48■■■■□ 20.6
PRPF8-215ENST00000576958 ROR1Q01973 937 aa13.22□□□□□ -0.29
PRPF8-215ENST00000576958 PTGDRQ13258 359 aa13.22□□□□□ -0.29
PRPF8-215ENST00000576958 TSSK4Q6SA08 328 aa13.22□□□□□ -0.29
PRPF8-215ENST00000576958 ALKAL1Q6UXT8 129 aa13.22□□□□□ -0.29
PRPF8-215ENST00000576958 GPIHBP1Q8IV16 184 aa13.22□□□□□ -0.29
PRPF8-215ENST00000576958 GPR65Q8IYL9 337 aa13.22□□□□□ -0.29
PRPF8-215ENST00000576958 KIAA2013Q8IYS2 634 aa13.22□□□□□ -0.29
PRPF8-215ENST00000576958 HS6ST3Q8IZP7 471 aa13.22□□□□□ -0.29
PRPF8-215ENST00000576958 KCNG4Q8TDN1 519 aa13.22□□□□□ -0.29
PRPF8-215ENST00000576958 LRRC15Q8TF66 581 aa13.22□□□□□ -0.29
PRPF8-215ENST00000576958 RMDN1Q96DB5 314 aa13.22□□□□□ -0.29
PRPF8-215ENST00000576958 FOXP1Q9H334 677 aaPredicted RBP13.22□□□□□ -0.29
PRPF8-215ENST00000576958 PPP4R2Q9NY27 417 aa13.22□□□□□ -0.29
PRPF8-215ENST00000576958 TUBGCP4Q9UGJ1 667 aa13.22□□□□□ -0.29
PRPF8-215ENST00000576958 LIMCH1Q9UPQ0 1083 aa13.22□□□□□ -0.29
PRPF8-215ENST00000576958 COL4A2P08572 1712 aa13.22□□□□□ -0.29
PRPF8-215ENST00000576958 PDCD11Q14690 1871 aaKnown RBP13.21□□□□□ -0.29
PRPF8-215ENST00000576958 PODXLO00592 558 aa13.21□□□□□ -0.29
PRPF8-215ENST00000576958 RHOP08100 348 aa13.21□□□□□ -0.29
PRPF8-215ENST00000576958 FCARP24071 287 aa13.21□□□□□ -0.29
PRPF8-215ENST00000576958 GUCY2FP51841 1108 aa13.21□□□□□ -0.29
PRPF8-215ENST00000576958 STARD6P59095 220 aa13.21□□□□□ -0.29
PRPF8-215ENST00000576958 GRM2Q14416 872 aa13.21□□□□□ -0.29
PRPF8-215ENST00000576958 SAFBQ15424 915 aaKnown RBP eCLIP13.21□□□□□ -0.29
PRPF8-215ENST00000576958 ZRSR1Q15695 479 aaKnown RBP13.21□□□□□ -0.29
PRPF8-215ENST00000576958 DCAF4L1Q3SXM0 396 aa13.21□□□□□ -0.29
PRPF8-215ENST00000576958 ZNF568Q3ZCX4 644 aa13.21□□□□□ -0.29
PRPF8-215ENST00000576958 PABPC1LQ4VXU2 614 aaKnown RBP13.21□□□□□ -0.29
PRPF8-215ENST00000576958 VARS2Q5ST30 1063 aaKnown RBP13.21□□□□□ -0.29
PRPF8-215ENST00000576958 TANGO2Q6ICL3 276 aa13.21□□□□□ -0.29
PRPF8-215ENST00000576958 PHLDB3Q6NSJ2 640 aa13.21□□□□□ -0.29
PRPF8-215ENST00000576958 RINT1Q6NUQ1 792 aa13.21□□□□□ -0.29
PRPF8-215ENST00000576958 IGSF22Q8N9C0 903 aa13.21□□□□□ -0.29
PRPF8-215ENST00000576958 ERMNQ8TAM6 284 aa13.21□□□□□ -0.29
PRPF8-215ENST00000576958 ZSWIM3Q96MP5 696 aa13.21□□□□□ -0.29
PRPF8-215ENST00000576958 PNMA5Q96PV4 448 aa13.21□□□□□ -0.29
PRPF8-215ENST00000576958 ADPGKQ9BRR6 497 aa13.21□□□□□ -0.29
PRPF8-215ENST00000576958 DPP7Q9UHL4 492 aa13.21□□□□□ -0.29
PRPF8-215ENST00000576958 TNFSF13BQ9Y275 285 aa13.21□□□□□ -0.29
PRPF8-215ENST00000576958 CACNA1AO00555 2505 aa13.21□□□□□ -0.29
PRPF8-215ENST00000576958 CEP250Q9BV73 2442 aa13.2□□□□□ -0.3
PRPF8-215ENST00000576958 TMEM189-UBE2V1I3L0A0 370 aa13.2□□□□□ -0.3
PRPF8-215ENST00000576958 K7ERI5 159 aa13.2□□□□□ -0.3
PRPF8-215ENST00000576958 CD2BP2O95400 341 aaKnown RBP13.2□□□□□ -0.3
PRPF8-215ENST00000576958 VNN2O95498 520 aa13.2□□□□□ -0.3
PRPF8-215ENST00000576958 HNRNPA1P09651 372 aaKnown RBP eCLIP13.2□□□□□ -0.3
PRPF8-215ENST00000576958 OR4Q2P0C623 313 aa13.2□□□□□ -0.3
PRPF8-215ENST00000576958 PROZP22891 400 aa13.2□□□□□ -0.3
PRPF8-215ENST00000576958 GRM5P41594 1212 aa13.2□□□□□ -0.3
PRPF8-215ENST00000576958 CREMQ03060 361 aa13.2□□□□□ -0.3
PRPF8-215ENST00000576958 UBXN2BQ14CS0 331 aa13.2□□□□□ -0.3
PRPF8-215ENST00000576958 MLF2Q15773 248 aaPredicted RBP13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms