RNA–Protein interactions for RNA: ENST00000576218.5

SMG6-220, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 902 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-220ENST00000576218 POP1Q99575 1024 aaKnown RBP16.63■□□□□ 0.25
SMG6-220ENST00000576218 GPR62Q9BZJ7 368 aa16.63■□□□□ 0.25
SMG6-220ENST00000576218 ST6GALNAC4Q9H4F1 302 aa16.63■□□□□ 0.25
SMG6-220ENST00000576218 OLFML3Q9NRN5 406 aa16.63■□□□□ 0.25
SMG6-220ENST00000576218 CNTN3Q9P232 1028 aa16.63■□□□□ 0.25
SMG6-220ENST00000576218 ZDHHC9Q9Y397 364 aa16.63■□□□□ 0.25
SMG6-220ENST00000576218 PODXLO00592 558 aa16.62■□□□□ 0.25
SMG6-220ENST00000576218 CNPP09543 421 aaKnown RBP16.62■□□□□ 0.25
SMG6-220ENST00000576218 KCNE1P15382 129 aa16.62■□□□□ 0.25
SMG6-220ENST00000576218 HOXB8P17481 243 aaPredicted RBP16.62■□□□□ 0.25
SMG6-220ENST00000576218 AFMP43652 599 aa16.62■□□□□ 0.25
SMG6-220ENST00000576218 DSG1Q02413 1049 aa16.62■□□□□ 0.25
SMG6-220ENST00000576218 POSTNQ15063 836 aa16.62■□□□□ 0.25
SMG6-220ENST00000576218 L1TD1Q5T7N2 865 aaKnown RBP16.62■□□□□ 0.25
SMG6-220ENST00000576218 DCLRE1AQ6PJP8 1040 aa16.62■□□□□ 0.25
SMG6-220ENST00000576218 MSLNLQ96KJ4 702 aa16.62■□□□□ 0.25
SMG6-220ENST00000576218 FIZ1Q96SL8 496 aa16.62■□□□□ 0.25
SMG6-220ENST00000576218 TTPALQ9BTX7 342 aa16.62■□□□□ 0.25
SMG6-220ENST00000576218 TRIM9Q9C026 710 aa16.62■□□□□ 0.25
SMG6-220ENST00000576218 PLEKHA5Q9HAU0 1116 aa16.62■□□□□ 0.25
SMG6-220ENST00000576218 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.62■□□□□ 0.25
SMG6-220ENST00000576218 KBTBD4Q9NVX7 518 aa16.62■□□□□ 0.25
SMG6-220ENST00000576218 DPP7Q9UHL4 492 aa16.62■□□□□ 0.25
SMG6-220ENST00000576218 USP15Q9Y4E8 981 aaPredicted RBP16.62■□□□□ 0.25
SMG6-220ENST00000576218 XIRP2A4UGR9 3374 aa16.62■□□□□ 0.25
SMG6-220ENST00000576218 TTC28Q96AY4 2481 aa16.61■□□□□ 0.25
SMG6-220ENST00000576218 A0A0B4J269 797 aa16.61■□□□□ 0.25
SMG6-220ENST00000576218 GOLGA6L4A6NEF3 574 aa16.61■□□□□ 0.25
SMG6-220ENST00000576218 GLUD1P00367 558 aa16.61■□□□□ 0.25
SMG6-220ENST00000576218 MYBP10242 640 aa16.61■□□□□ 0.25
SMG6-220ENST00000576218 EPCAMP16422 314 aa16.61■□□□□ 0.25
SMG6-220ENST00000576218 TNFSF9P41273 254 aa16.61■□□□□ 0.25
SMG6-220ENST00000576218 SPAG1Q07617 926 aa16.61■□□□□ 0.25
SMG6-220ENST00000576218 NAB2Q15742 525 aa16.61■□□□□ 0.25
SMG6-220ENST00000576218 SMAD2Q15796 467 aaKnown RBP16.61■□□□□ 0.25
SMG6-220ENST00000576218 SLC10A6Q3KNW5 377 aa16.61■□□□□ 0.25
SMG6-220ENST00000576218 RARS2Q5T160 578 aaKnown RBP16.61■□□□□ 0.25
SMG6-220ENST00000576218 PDXDC1Q6P996 788 aa16.61■□□□□ 0.25
SMG6-220ENST00000576218 TMEM184AQ6ZMB5 413 aa16.61■□□□□ 0.25
SMG6-220ENST00000576218 KCNN1Q92952 543 aa16.61■□□□□ 0.25
SMG6-220ENST00000576218 C18orf25Q96B23 403 aaPredicted RBP16.61■□□□□ 0.25
SMG6-220ENST00000576218 CHAMP1Q96JM3 812 aa16.61■□□□□ 0.25
SMG6-220ENST00000576218 TMEM206Q9H813 350 aa16.61■□□□□ 0.25
SMG6-220ENST00000576218 PRKAG3Q9UGI9 489 aa16.61■□□□□ 0.25
SMG6-220ENST00000576218 AGO2Q9UKV8 859 aaKnown RBP16.61■□□□□ 0.25
SMG6-220ENST00000576218 A0A1B0GVL5 298 aa16.6■□□□□ 0.25
SMG6-220ENST00000576218 ANKRD63C9JTQ0 380 aa16.6■□□□□ 0.25
SMG6-220ENST00000576218 TEX28O15482 410 aa16.6■□□□□ 0.25
SMG6-220ENST00000576218 PFKFB1P16118 471 aa16.6■□□□□ 0.25
SMG6-220ENST00000576218 MCM4P33991 863 aa16.6■□□□□ 0.25
SMG6-220ENST00000576218 ACOT2P49753 483 aa16.6■□□□□ 0.25
SMG6-220ENST00000576218 PSMD5Q16401 504 aa16.6■□□□□ 0.25
SMG6-220ENST00000576218 UPP1Q16831 310 aa16.6■□□□□ 0.25
SMG6-220ENST00000576218 XKR4Q5GH76 650 aa16.6■□□□□ 0.25
SMG6-220ENST00000576218 PRSS55Q6UWB4 352 aaPredicted RBP16.6■□□□□ 0.25
SMG6-220ENST00000576218 ALKAL1Q6UXT8 129 aa16.6■□□□□ 0.25
SMG6-220ENST00000576218 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.6■□□□□ 0.25
SMG6-220ENST00000576218 ADHFE1Q8IWW8 467 aa16.6■□□□□ 0.25
SMG6-220ENST00000576218 GJD3Q8N144 294 aa16.6■□□□□ 0.25
SMG6-220ENST00000576218 FBXL18Q96ME1 805 aa16.6■□□□□ 0.25
SMG6-220ENST00000576218 ZMAT2Q96NC0 199 aaKnown RBP16.6■□□□□ 0.25
SMG6-220ENST00000576218 HAPLN2Q9GZV7 340 aa16.6■□□□□ 0.25
SMG6-220ENST00000576218 BLZF1Q9H2G9 400 aa16.6■□□□□ 0.25
SMG6-220ENST00000576218 UBQLN1Q9UMX0 589 aaKnown RBP16.6■□□□□ 0.25
SMG6-220ENST00000576218 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.6■□□□□ 0.25
SMG6-220ENST00000576218 CITO14578 2027 aa16.6■□□□□ 0.25
SMG6-220ENST00000576218 FRMD3A2A2Y4 597 aa16.59■□□□□ 0.25
SMG6-220ENST00000576218 LACTBL1A8MY62 500 aa16.59■□□□□ 0.25
SMG6-220ENST00000576218 TISP43B9A030 160 aa16.59■□□□□ 0.25
SMG6-220ENST00000576218 TMEM189-UBE2V1I3L0A0 370 aa16.59■□□□□ 0.25
SMG6-220ENST00000576218 PRPF6O94906 941 aaKnown RBP16.59■□□□□ 0.25
SMG6-220ENST00000576218 RPL17P18621 184 aaKnown RBP16.59■□□□□ 0.25
SMG6-220ENST00000576218 CMA1P23946 247 aa16.59■□□□□ 0.25
SMG6-220ENST00000576218 RPL9P32969 192 aaKnown RBP16.59■□□□□ 0.25
SMG6-220ENST00000576218 CLCN4P51793 760 aa16.59■□□□□ 0.25
SMG6-220ENST00000576218 CASP5P51878 434 aa16.59■□□□□ 0.25
SMG6-220ENST00000576218 ITIH3Q06033 890 aa16.59■□□□□ 0.25
SMG6-220ENST00000576218 SOX4Q06945 474 aaPredicted RBP16.59■□□□□ 0.25
SMG6-220ENST00000576218 CBX2Q14781 532 aaPredicted RBP16.59■□□□□ 0.25
SMG6-220ENST00000576218 RTP2Q5QGT7 225 aa16.59■□□□□ 0.25
SMG6-220ENST00000576218 FAM26FQ5R3K3 315 aa16.59■□□□□ 0.25
SMG6-220ENST00000576218 ZBTB41Q5SVQ8 909 aa16.59■□□□□ 0.25
SMG6-220ENST00000576218 KIAA0319Q5VV43 1072 aa16.59■□□□□ 0.25
SMG6-220ENST00000576218 ARMCX5Q6P1M9 558 aa16.59■□□□□ 0.25
SMG6-220ENST00000576218 SLC39A4Q6P5W5 647 aa16.59■□□□□ 0.25
SMG6-220ENST00000576218 PALB2Q86YC2 1186 aa16.59■□□□□ 0.25
SMG6-220ENST00000576218 CD302Q8IX05 232 aa16.59■□□□□ 0.25
SMG6-220ENST00000576218 RNF168Q8IYW5 571 aaPredicted RBP16.59■□□□□ 0.25
SMG6-220ENST00000576218 FSIP1Q8NA03 581 aa16.59■□□□□ 0.25
SMG6-220ENST00000576218 BEST2Q8NFU1 509 aa16.59■□□□□ 0.25
SMG6-220ENST00000576218 RIPOR3Q96MK2 946 aa16.59■□□□□ 0.25
SMG6-220ENST00000576218 C7orf25Q9BPX7 421 aa16.59■□□□□ 0.25
SMG6-220ENST00000576218 SFXN1Q9H9B4 322 aa16.59■□□□□ 0.25
SMG6-220ENST00000576218 TSHZ2Q9NRE2 1034 aa16.59■□□□□ 0.25
SMG6-220ENST00000576218 CHST7Q9NS84 486 aa16.59■□□□□ 0.25
SMG6-220ENST00000576218 TUBGCP4Q9UGJ1 667 aa16.59■□□□□ 0.25
SMG6-220ENST00000576218 SERTAD1Q9UHV2 236 aa16.59■□□□□ 0.25
SMG6-220ENST00000576218 TTC26A0AVF1 554 aa16.58■□□□□ 0.24
SMG6-220ENST00000576218 I3L4J1 428 aa16.58■□□□□ 0.24
SMG6-220ENST00000576218 PPP1R37O75864 691 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms