RNA–Protein interactions for RNA: ENST00000573600.5

CTDNEP1-208, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CTDNEP1, Length 1,724 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-208ENST00000573600 IFI16Q16666 785 aaKnown RBP31.33■■■□□ 2.61
CTDNEP1-208ENST00000573600 ZNF710Q8N1W2 664 aa31.33■■■□□ 2.61
CTDNEP1-208ENST00000573600 ADPGKQ9BRR6 497 aa31.33■■■□□ 2.61
CTDNEP1-208ENST00000573600 UPF3AQ9H1J1 476 aaKnown RBP31.33■■■□□ 2.61
CTDNEP1-208ENST00000573600 C17orf102A2RUQ5 167 aa31.32■■■□□ 2.61
CTDNEP1-208ENST00000573600 CYP26A1O43174 497 aa31.32■■■□□ 2.61
CTDNEP1-208ENST00000573600 GPR32O75388 356 aa31.32■■■□□ 2.61
CTDNEP1-208ENST00000573600 C6orf222P0C671 652 aaPredicted RBP31.32■■■□□ 2.61
CTDNEP1-208ENST00000573600 TBXAS1P24557 533 aaPredicted RBP31.32■■■□□ 2.61
CTDNEP1-208ENST00000573600 KIZQ2M2Z5 673 aa31.32■■■□□ 2.61
CTDNEP1-208ENST00000573600 TRAPPC11Q7Z392 1133 aa31.32■■■□□ 2.61
CTDNEP1-208ENST00000573600 EPS8L1Q8TE68 723 aa31.32■■■□□ 2.61
CTDNEP1-208ENST00000573600 CPB2Q96IY4 423 aa31.32■■■□□ 2.61
CTDNEP1-208ENST00000573600 A0A0A6YYK5 440 aaPredicted RBP31.32■■■□□ 2.6
CTDNEP1-208ENST00000573600 A0A1B0GUA9 196 aa31.32■■■□□ 2.6
CTDNEP1-208ENST00000573600 SEPT4O43236 478 aa31.32■■■□□ 2.6
CTDNEP1-208ENST00000573600 ATP1A1P05023 1023 aaKnown RBP31.32■■■□□ 2.6
CTDNEP1-208ENST00000573600 NCBP1Q09161 790 aaKnown RBP31.32■■■□□ 2.6
CTDNEP1-208ENST00000573600 WHAMMP3Q1A5X7 153 aa31.32■■■□□ 2.6
CTDNEP1-208ENST00000573600 APBB1IPQ7Z5R6 666 aaPredicted RBP31.32■■■□□ 2.6
CTDNEP1-208ENST00000573600 CEP112Q8N8E3 955 aa31.32■■■□□ 2.6
CTDNEP1-208ENST00000573600 CEP120Q8N960 986 aa31.32■■■□□ 2.6
CTDNEP1-208ENST00000573600 ANKRD36BP1Q96IX9 119 aa31.32■■■□□ 2.6
CTDNEP1-208ENST00000573600 SEPT11Q9NVA2 429 aaKnown RBP31.32■■■□□ 2.6
CTDNEP1-208ENST00000573600 SAR1BQ9Y6B6 198 aa31.32■■■□□ 2.6
CTDNEP1-208ENST00000573600 MYH10P35580 1976 aa31.31■■■□□ 2.6
CTDNEP1-208ENST00000573600 ENC1O14682 589 aa31.31■■■□□ 2.6
CTDNEP1-208ENST00000573600 BUB1O43683 1085 aa31.31■■■□□ 2.6
CTDNEP1-208ENST00000573600 SGPL1O95470 568 aa31.31■■■□□ 2.6
CTDNEP1-208ENST00000573600 TNNC2P02585 160 aa31.31■■■□□ 2.6
CTDNEP1-208ENST00000573600 TMEM191BP0C7N4 346 aa31.31■■■□□ 2.6
CTDNEP1-208ENST00000573600 STAG3L1P0CL83 205 aa31.31■■■□□ 2.6
CTDNEP1-208ENST00000573600 PDE6CP51160 858 aa31.31■■■□□ 2.6
CTDNEP1-208ENST00000573600 OSTNP61366 133 aa31.31■■■□□ 2.6
CTDNEP1-208ENST00000573600 NKX3-2P78367 333 aa31.31■■■□□ 2.6
CTDNEP1-208ENST00000573600 RPUSD2Q8IZ73 545 aaKnown RBP31.31■■■□□ 2.6
CTDNEP1-208ENST00000573600 C7orf31Q8N865 590 aa31.31■■■□□ 2.6
CTDNEP1-208ENST00000573600 DHX38Q92620 1227 aaKnown RBP31.31■■■□□ 2.6
CTDNEP1-208ENST00000573600 MTG1Q9BT17 334 aaPredicted RBP31.31■■■□□ 2.6
CTDNEP1-208ENST00000573600 MTMR12Q9C0I1 747 aa31.31■■■□□ 2.6
CTDNEP1-208ENST00000573600 NOCTQ9UK39 431 aaKnown RBP31.31■■■□□ 2.6
CTDNEP1-208ENST00000573600 HOXC8P31273 242 aa31.3■■■□□ 2.6
CTDNEP1-208ENST00000573600 NOP14P78316 857 aaKnown RBP31.3■■■□□ 2.6
CTDNEP1-208ENST00000573600 CUL2Q13617 745 aa31.3■■■□□ 2.6
CTDNEP1-208ENST00000573600 SMYD5Q6GMV2 418 aa31.3■■■□□ 2.6
CTDNEP1-208ENST00000573600 RUFY4Q6ZNE9 571 aa31.3■■■□□ 2.6
CTDNEP1-208ENST00000573600 SLC20A1Q8WUM9 679 aa31.3■■■□□ 2.6
CTDNEP1-208ENST00000573600 RARBP10826 455 aa31.29■■■□□ 2.6
CTDNEP1-208ENST00000573600 GNASQ5JWF2 1037 aa31.29■■■□□ 2.6
CTDNEP1-208ENST00000573600 NME8Q8N427 588 aa31.29■■■□□ 2.6
CTDNEP1-208ENST00000573600 PCDHGC5Q9Y5F6 944 aa31.29■■■□□ 2.6
CTDNEP1-208ENST00000573600 EFCAB8A8MWE9 144 aa31.29■■■□□ 2.6
CTDNEP1-208ENST00000573600 TMEM253P0C7T8 217 aa31.29■■■□□ 2.6
CTDNEP1-208ENST00000573600 CXCL8P10145 99 aa31.29■■■□□ 2.6
CTDNEP1-208ENST00000573600 KRT5P13647 590 aa31.29■■■□□ 2.6
CTDNEP1-208ENST00000573600 CYP11B1P15538 503 aa31.29■■■□□ 2.6
CTDNEP1-208ENST00000573600 GALCP54803 685 aa31.29■■■□□ 2.6
CTDNEP1-208ENST00000573600 BPIFB4P59827 614 aa31.29■■■□□ 2.6
CTDNEP1-208ENST00000573600 TFAMQ00059 246 aaKnown RBP31.29■■■□□ 2.6
CTDNEP1-208ENST00000573600 HIC1Q14526 733 aa31.29■■■□□ 2.6
CTDNEP1-208ENST00000573600 SGSM1Q2NKQ1 1148 aa31.29■■■□□ 2.6
CTDNEP1-208ENST00000573600 DCAF4L1Q3SXM0 396 aa31.29■■■□□ 2.6
CTDNEP1-208ENST00000573600 NOP9Q86U38 636 aaKnown RBP31.29■■■□□ 2.6
CTDNEP1-208ENST00000573600 SLC47A2Q86VL8 602 aa31.29■■■□□ 2.6
CTDNEP1-208ENST00000573600 ASB7Q9H672 318 aa31.29■■■□□ 2.6
CTDNEP1-208ENST00000573600 APOBEC3GQ9HC16 384 aaKnown RBP31.29■■■□□ 2.6
CTDNEP1-208ENST00000573600 HDAC6Q9UBN7 1215 aa31.29■■■□□ 2.6
CTDNEP1-208ENST00000573600 TREHO43280 583 aa31.28■■■□□ 2.6
CTDNEP1-208ENST00000573600 ASS1P00966 412 aaKnown RBP31.28■■■□□ 2.6
CTDNEP1-208ENST00000573600 GZMAP12544 262 aa31.28■■■□□ 2.6
CTDNEP1-208ENST00000573600 APLP1P51693 650 aa31.28■■■□□ 2.6
CTDNEP1-208ENST00000573600 CACNB2Q08289 660 aaPredicted RBP31.28■■■□□ 2.6
CTDNEP1-208ENST00000573600 TMEM62Q0P6H9 643 aa31.28■■■□□ 2.6
CTDNEP1-208ENST00000573600 TRPC3Q13507 836 aa31.28■■■□□ 2.6
CTDNEP1-208ENST00000573600 SPOPLQ6IQ16 392 aa31.28■■■□□ 2.6
CTDNEP1-208ENST00000573600 DNAJB3Q8WWF6 145 aa31.28■■■□□ 2.6
CTDNEP1-208ENST00000573600 TSKSQ9UJT2 592 aa31.28■■■□□ 2.6
CTDNEP1-208ENST00000573600 MYADML2A6NDP7 307 aa31.27■■■□□ 2.6
CTDNEP1-208ENST00000573600 DARSP14868 501 aaKnown RBP31.27■■■□□ 2.6
CTDNEP1-208ENST00000573600 PRLRP16471 622 aa31.27■■■□□ 2.6
CTDNEP1-208ENST00000573600 HOXD10P28358 340 aa31.27■■■□□ 2.6
CTDNEP1-208ENST00000573600 CDR2Q01850 454 aa31.27■■■□□ 2.6
CTDNEP1-208ENST00000573600 CATSPER4Q7RTX7 472 aa31.27■■■□□ 2.6
CTDNEP1-208ENST00000573600 EFCAB13Q8IY85 973 aa31.27■■■□□ 2.6
CTDNEP1-208ENST00000573600 TSC1Q92574 1164 aa31.27■■■□□ 2.6
CTDNEP1-208ENST00000573600 ELMO3Q96BJ8 720 aa31.27■■■□□ 2.6
CTDNEP1-208ENST00000573600 ANKRD62A6NC57 917 aa31.27■■■□□ 2.6
CTDNEP1-208ENST00000573600 CST3P01034 146 aaPredicted RBP31.27■■■□□ 2.6
CTDNEP1-208ENST00000573600 CHRNB2P17787 502 aa31.27■■■□□ 2.6
CTDNEP1-208ENST00000573600 ZNF677Q86XU0 584 aa31.27■■■□□ 2.6
CTDNEP1-208ENST00000573600 TMEM192Q8IY95 271 aa31.27■■■□□ 2.6
CTDNEP1-208ENST00000573600 PPP1R13LQ8WUF5 828 aa31.27■■■□□ 2.6
CTDNEP1-208ENST00000573600 CTNNBL1Q8WYA6 563 aaPredicted RBP31.27■■■□□ 2.6
CTDNEP1-208ENST00000573600 ISCUQ9H1K1 167 aa31.27■■■□□ 2.6
CTDNEP1-208ENST00000573600 GINS2Q9Y248 185 aa31.27■■■□□ 2.6
CTDNEP1-208ENST00000573600 NUB1Q9Y5A7 615 aa31.27■■■□□ 2.6
CTDNEP1-208ENST00000573600 TRIP12Q14669 1992 aaPredicted RBP31.26■■■□□ 2.6
CTDNEP1-208ENST00000573600 TADA3O75528 432 aa31.26■■■□□ 2.59
CTDNEP1-208ENST00000573600 OSMRQ99650 979 aa31.26■■■□□ 2.59
CTDNEP1-208ENST00000573600 ARID3AQ99856 593 aa31.26■■■□□ 2.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms