RNA–Protein interactions for RNA: ENST00000570937.1

NUP88-202, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 361 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-202ENST00000570937 NAIPQ13075 1403 aa5.4□□□□□ -1.55
NUP88-202ENST00000570937 SPATA31D1Q6ZQQ2 1576 aa5.39□□□□□ -1.55
NUP88-202ENST00000570937 GRXCR1A8MXD5 290 aa5.39□□□□□ -1.55
NUP88-202ENST00000570937 B5MCH6 92 aa5.39□□□□□ -1.55
NUP88-202ENST00000570937 ALG1L2C9J202 215 aa5.39□□□□□ -1.55
NUP88-202ENST00000570937 AKR1B10O60218 316 aa5.39□□□□□ -1.55
NUP88-202ENST00000570937 CANXP27824 592 aaKnown RBP5.39□□□□□ -1.55
NUP88-202ENST00000570937 ACVRL1P37023 503 aa5.39□□□□□ -1.55
NUP88-202ENST00000570937 MCAMP43121 646 aa5.39□□□□□ -1.55
NUP88-202ENST00000570937 GUCY2FP51841 1108 aa5.39□□□□□ -1.55
NUP88-202ENST00000570937 CCT2P78371 535 aaKnown RBP5.39□□□□□ -1.55
NUP88-202ENST00000570937 DGCR2P98153 550 aa5.39□□□□□ -1.55
NUP88-202ENST00000570937 MGAT2Q10469 447 aa5.39□□□□□ -1.55
NUP88-202ENST00000570937 IDI1Q13907 227 aa5.39□□□□□ -1.55
NUP88-202ENST00000570937 VPS72Q15906 364 aa5.39□□□□□ -1.55
NUP88-202ENST00000570937 LSM12Q3MHD2 195 aaKnown RBP5.39□□□□□ -1.55
NUP88-202ENST00000570937 RABL3Q5HYI8 236 aa5.39□□□□□ -1.55
NUP88-202ENST00000570937 SYDE2Q5VT97 1194 aa5.39□□□□□ -1.55
NUP88-202ENST00000570937 DRICH1Q6PGQ1 229 aaPredicted RBP5.39□□□□□ -1.55
NUP88-202ENST00000570937 PRPF38AQ8NAV1 312 aaKnown RBP5.39□□□□□ -1.55
NUP88-202ENST00000570937 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.39□□□□□ -1.55
NUP88-202ENST00000570937 CPEB1Q9BZB8 566 aaKnown RBP5.39□□□□□ -1.55
NUP88-202ENST00000570937 BRINP2Q9C0B6 783 aa5.39□□□□□ -1.55
NUP88-202ENST00000570937 EPC1Q9H2F5 836 aa5.39□□□□□ -1.55
NUP88-202ENST00000570937 EFCAB6Q5THR3 1501 aa5.38□□□□□ -1.55
NUP88-202ENST00000570937 UNC13BO14795 1591 aa5.38□□□□□ -1.55
NUP88-202ENST00000570937 VWDEQ8N2E2 1590 aa5.38□□□□□ -1.55
NUP88-202ENST00000570937 ZNF142P52746 1687 aaPredicted RBP5.38□□□□□ -1.55
NUP88-202ENST00000570937 CEP152O94986 1710 aa5.38□□□□□ -1.55
NUP88-202ENST00000570937 OSMP13725 252 aa5.38□□□□□ -1.55
NUP88-202ENST00000570937 HSP90B1P14625 803 aaKnown RBP5.38□□□□□ -1.55
NUP88-202ENST00000570937 HK1P19367 917 aa5.38□□□□□ -1.55
NUP88-202ENST00000570937 ECHS1P30084 290 aa5.38□□□□□ -1.55
NUP88-202ENST00000570937 FLT3LGP49771 235 aa5.38□□□□□ -1.55
NUP88-202ENST00000570937 KRT85P78386 507 aa5.38□□□□□ -1.55
NUP88-202ENST00000570937 MTMR1Q13613 665 aa5.38□□□□□ -1.55
NUP88-202ENST00000570937 TUBA3CQ13748 450 aa5.38□□□□□ -1.55
NUP88-202ENST00000570937 FAM47AQ5JRC9 791 aa5.38□□□□□ -1.55
NUP88-202ENST00000570937 PRAMEF14Q5SWL7 426 aa5.38□□□□□ -1.55
NUP88-202ENST00000570937 TUBA3EQ6PEY2 450 aa5.38□□□□□ -1.55
NUP88-202ENST00000570937 ZNF572Q7Z3I7 529 aaPredicted RBP5.38□□□□□ -1.55
NUP88-202ENST00000570937 AMOTL1Q8IY63 956 aa5.38□□□□□ -1.55
NUP88-202ENST00000570937 C1orf162Q8NEQ5 155 aaPredicted RBP5.38□□□□□ -1.55
NUP88-202ENST00000570937 MDM1Q8TC05 714 aa5.38□□□□□ -1.55
NUP88-202ENST00000570937 ZNF341Q9BYN7 854 aa5.38□□□□□ -1.55
NUP88-202ENST00000570937 CSRNP2Q9H175 543 aa5.38□□□□□ -1.55
NUP88-202ENST00000570937 KCNH6Q9H252 994 aa5.38□□□□□ -1.55
NUP88-202ENST00000570937 PCDH12Q9NPG4 1184 aa5.38□□□□□ -1.55
NUP88-202ENST00000570937 HDAC5Q9UQL6 1122 aa5.38□□□□□ -1.55
NUP88-202ENST00000570937 COL4A3BPQ9Y5P4 624 aa5.38□□□□□ -1.55
NUP88-202ENST00000570937 NOS1P29475 1434 aa5.38□□□□□ -1.55
NUP88-202ENST00000570937 TET3O43151 1660 aa5.37□□□□□ -1.55
NUP88-202ENST00000570937 TBKBP1A7MCY6 615 aa5.37□□□□□ -1.55
NUP88-202ENST00000570937 PRR5-ARHGAP8B1AHC4 643 aa5.37□□□□□ -1.55
NUP88-202ENST00000570937 NPIPB8E9PQR5 432 aa5.37□□□□□ -1.55
NUP88-202ENST00000570937 TRIM24O15164 1050 aa5.37□□□□□ -1.55
NUP88-202ENST00000570937 ADCY6O43306 1168 aa5.37□□□□□ -1.55
NUP88-202ENST00000570937 NARSO43776 548 aaKnown RBP5.37□□□□□ -1.55
NUP88-202ENST00000570937 RBP3P10745 1247 aa5.37□□□□□ -1.55
NUP88-202ENST00000570937 ADSLP30566 484 aaPredicted RBP5.37□□□□□ -1.55
NUP88-202ENST00000570937 SREBF1P36956 1147 aa5.37□□□□□ -1.55
NUP88-202ENST00000570937 SLC25A3Q00325 362 aa5.37□□□□□ -1.55
NUP88-202ENST00000570937 CSRP2Q16527 193 aa5.37□□□□□ -1.55
NUP88-202ENST00000570937 BMT2Q1RMZ1 405 aa5.37□□□□□ -1.55
NUP88-202ENST00000570937 MFSD14BQ5SR56 506 aa5.37□□□□□ -1.55
NUP88-202ENST00000570937 FNDC7Q5VTL7 733 aa5.37□□□□□ -1.55
NUP88-202ENST00000570937 XYLT1Q86Y38 959 aa5.37□□□□□ -1.55
NUP88-202ENST00000570937 TRMT2AQ8IZ69 625 aaKnown RBP5.37□□□□□ -1.55
NUP88-202ENST00000570937 ZCRB1Q8TBF4 217 aaKnown RBP5.37□□□□□ -1.55
NUP88-202ENST00000570937 PGBD4Q96DM1 585 aa5.37□□□□□ -1.55
NUP88-202ENST00000570937 CEP95Q96GE4 821 aa5.37□□□□□ -1.55
NUP88-202ENST00000570937 NDC1Q9BTX1 674 aa5.37□□□□□ -1.55
NUP88-202ENST00000570937 ADI1Q9BV57 179 aa5.37□□□□□ -1.55
NUP88-202ENST00000570937 DMRT3Q9NQL9 472 aa5.37□□□□□ -1.55
NUP88-202ENST00000570937 TRHDEQ9UKU6 1024 aa5.37□□□□□ -1.55
NUP88-202ENST00000570937 ZBTB21Q9ULJ3 1066 aa5.37□□□□□ -1.55
NUP88-202ENST00000570937 PCDHGA2Q9Y5H1 932 aa5.37□□□□□ -1.55
NUP88-202ENST00000570937 ATRNL1Q5VV63 1379 aa5.37□□□□□ -1.55
NUP88-202ENST00000570937 TMEM2Q9UHN6 1383 aa5.37□□□□□ -1.55
NUP88-202ENST00000570937 SETD5Q9C0A6 1442 aa5.37□□□□□ -1.55
NUP88-202ENST00000570937 IQGAP3Q86VI3 1631 aa5.37□□□□□ -1.55
NUP88-202ENST00000570937 FZD9O00144 591 aa5.36□□□□□ -1.55
NUP88-202ENST00000570937 CYR61O00622 381 aa5.36□□□□□ -1.55
NUP88-202ENST00000570937 PJA2O43164 708 aa5.36□□□□□ -1.55
NUP88-202ENST00000570937 ENDOD1O94919 500 aa5.36□□□□□ -1.55
NUP88-202ENST00000570937 ALOX15P16050 662 aaPredicted RBP5.36□□□□□ -1.55
NUP88-202ENST00000570937 GUCY1A2P33402 732 aa5.36□□□□□ -1.55
NUP88-202ENST00000570937 IARSP41252 1262 aaKnown RBP5.36□□□□□ -1.55
NUP88-202ENST00000570937 WASP42768 502 aa5.36□□□□□ -1.55
NUP88-202ENST00000570937 GDF5P43026 501 aa5.36□□□□□ -1.55
NUP88-202ENST00000570937 SP140Q13342 867 aa5.36□□□□□ -1.55
NUP88-202ENST00000570937 ANKS6Q68DC2 871 aa5.36□□□□□ -1.55
NUP88-202ENST00000570937 IGFL4Q6B9Z1 124 aa5.36□□□□□ -1.55
NUP88-202ENST00000570937 USP51Q70EK9 711 aa5.36□□□□□ -1.55
NUP88-202ENST00000570937 SLC16A11Q8NCK7 471 aa5.36□□□□□ -1.55
NUP88-202ENST00000570937 FBXO41Q8TF61 875 aa5.36□□□□□ -1.55
NUP88-202ENST00000570937 FAXDC2Q96IV6 333 aa5.36□□□□□ -1.55
NUP88-202ENST00000570937 NPHP4O75161 1426 aaPredicted RBP5.36□□□□□ -1.55
NUP88-202ENST00000570937 SCAF11Q99590 1463 aaKnown RBP5.36□□□□□ -1.55
NUP88-202ENST00000570937 STRCQ7RTU9 1775 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms