RNA–Protein interactions for RNA: ENST00000568949.1

SNX29-207, Transcript of sorting nexin 29, humanhuman

TSL 3

Gene SNX29, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-207ENST00000568949 RBM25P49756 843 aaKnown RBP13.79□□□□□ -0.2
SNX29-207ENST00000568949 SLC5A9Q2M3M2 681 aa13.79□□□□□ -0.2
SNX29-207ENST00000568949 CPLX2Q6PUV4 134 aaKnown RBP13.79□□□□□ -0.2
SNX29-207ENST00000568949 CHAMP1Q96JM3 812 aa13.79□□□□□ -0.2
SNX29-207ENST00000568949 AIFM3Q96NN9 605 aa13.79□□□□□ -0.2
SNX29-207ENST00000568949 EIF2AK1Q9BQI3 630 aaKnown RBP13.79□□□□□ -0.2
SNX29-207ENST00000568949 POLR3FQ9H1D9 316 aaPredicted RBP13.79□□□□□ -0.2
SNX29-207ENST00000568949 FZD8Q9H461 694 aa13.79□□□□□ -0.2
SNX29-207ENST00000568949 TRPV5Q9NQA5 729 aa13.79□□□□□ -0.2
SNX29-207ENST00000568949 NDRG2Q9UN36 371 aaKnown RBP13.79□□□□□ -0.2
SNX29-207ENST00000568949 KCNJ14Q9UNX9 436 aa13.79□□□□□ -0.2
SNX29-207ENST00000568949 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.78□□□□□ -0.2
SNX29-207ENST00000568949 ARHGEF37A1IGU5 675 aa13.78□□□□□ -0.2
SNX29-207ENST00000568949 N4BP3O15049 544 aa13.78□□□□□ -0.2
SNX29-207ENST00000568949 FOXD2O60548 495 aaPredicted RBP13.78□□□□□ -0.2
SNX29-207ENST00000568949 RECQL4O94761 1208 aa13.78□□□□□ -0.2
SNX29-207ENST00000568949 MICAL2O94851 1124 aa13.78□□□□□ -0.2
SNX29-207ENST00000568949 CEBPBP17676 345 aa13.78□□□□□ -0.2
SNX29-207ENST00000568949 PTPN2P17706 415 aa13.78□□□□□ -0.2
SNX29-207ENST00000568949 FCARP24071 287 aa13.78□□□□□ -0.2
SNX29-207ENST00000568949 RARRES1P49788 294 aa13.78□□□□□ -0.2
SNX29-207ENST00000568949 CSRP2Q16527 193 aa13.78□□□□□ -0.2
SNX29-207ENST00000568949 LPAL2Q16609 132 aa13.78□□□□□ -0.2
SNX29-207ENST00000568949 CDCA2Q69YH5 1023 aaPredicted RBP13.78□□□□□ -0.2
SNX29-207ENST00000568949 POTEHQ6S545 545 aa13.78□□□□□ -0.2
SNX29-207ENST00000568949 ANKS3Q6ZW76 656 aa13.78□□□□□ -0.2
SNX29-207ENST00000568949 POTEDQ86YR6 584 aa13.78□□□□□ -0.2
SNX29-207ENST00000568949 DDX1Q92499 740 aaKnown RBP13.78□□□□□ -0.2
SNX29-207ENST00000568949 IRF7Q92985 503 aa13.78□□□□□ -0.2
SNX29-207ENST00000568949 ZNF274Q96GC6 653 aaPredicted RBP13.78□□□□□ -0.2
SNX29-207ENST00000568949 CCDC43Q96MW1 224 aaKnown RBP13.78□□□□□ -0.2
SNX29-207ENST00000568949 TRMT61BQ9BVS5 477 aaKnown RBP13.78□□□□□ -0.2
SNX29-207ENST00000568949 BRD9Q9H8M2 597 aa13.78□□□□□ -0.2
SNX29-207ENST00000568949 ZFP14Q9HCL3 533 aa13.78□□□□□ -0.2
SNX29-207ENST00000568949 SNTG2Q9NY99 539 aa13.78□□□□□ -0.2
SNX29-207ENST00000568949 CDY1Q9Y6F8 540 aa13.78□□□□□ -0.2
SNX29-207ENST00000568949 CHD6Q8TD26 2715 aa13.78□□□□□ -0.2
SNX29-207ENST00000568949 LRRIQ4A6NIV6 560 aa13.77□□□□□ -0.21
SNX29-207ENST00000568949 ZNF197O14709 1029 aa13.77□□□□□ -0.21
SNX29-207ENST00000568949 B3GAT3O94766 335 aa13.77□□□□□ -0.21
SNX29-207ENST00000568949 LRG1P02750 347 aa13.77□□□□□ -0.21
SNX29-207ENST00000568949 XRCC6P12956 609 aaKnown RBP eCLIP13.77□□□□□ -0.21
SNX29-207ENST00000568949 CNR2P34972 360 aa13.77□□□□□ -0.21
SNX29-207ENST00000568949 TOB2Q14106 344 aaPredicted RBP13.77□□□□□ -0.21
SNX29-207ENST00000568949 PRSS36Q5K4E3 855 aa13.77□□□□□ -0.21
SNX29-207ENST00000568949 PRR23CQ6ZRP0 262 aa13.77□□□□□ -0.21
SNX29-207ENST00000568949 PRR23BQ6ZRT6 265 aa13.77□□□□□ -0.21
SNX29-207ENST00000568949 PIK3AP1Q6ZUJ8 805 aa13.77□□□□□ -0.21
SNX29-207ENST00000568949 MAP4K3Q8IVH8 894 aa13.77□□□□□ -0.21
SNX29-207ENST00000568949 ZBTB8OSQ8IWT0 167 aa13.77□□□□□ -0.21
SNX29-207ENST00000568949 ZNF461Q8TAF7 563 aa13.77□□□□□ -0.21
SNX29-207ENST00000568949 FAM3CQ92520 227 aa13.77□□□□□ -0.21
SNX29-207ENST00000568949 PDZD7Q9H5P4 517 aa13.77□□□□□ -0.21
SNX29-207ENST00000568949 LMAN1LQ9HAT1 526 aa13.77□□□□□ -0.21
SNX29-207ENST00000568949 SEMA4GQ9NTN9 838 aa13.77□□□□□ -0.21
SNX29-207ENST00000568949 COL4A2P08572 1712 aa13.76□□□□□ -0.21
SNX29-207ENST00000568949 TRAPPC3O43617 180 aa13.76□□□□□ -0.21
SNX29-207ENST00000568949 XBP1P17861 261 aa13.76□□□□□ -0.21
SNX29-207ENST00000568949 ELF1P32519 619 aa13.76□□□□□ -0.21
SNX29-207ENST00000568949 CXCL12P48061 93 aa13.76□□□□□ -0.21
SNX29-207ENST00000568949 SIM2Q14190 667 aaPredicted RBP13.76□□□□□ -0.21
SNX29-207ENST00000568949 GRM2Q14416 872 aa13.76□□□□□ -0.21
SNX29-207ENST00000568949 FAM78AQ5JUQ0 283 aa13.76□□□□□ -0.21
SNX29-207ENST00000568949 SLC8B1Q6J4K2 584 aa13.76□□□□□ -0.21
SNX29-207ENST00000568949 CD300LGQ6UXG3 332 aa13.76□□□□□ -0.21
SNX29-207ENST00000568949 RUFY3Q7L099 469 aa13.76□□□□□ -0.21
SNX29-207ENST00000568949 DEPDC1BQ8WUY9 529 aa13.76□□□□□ -0.21
SNX29-207ENST00000568949 DDX27Q96GQ7 796 aaKnown RBP13.76□□□□□ -0.21
SNX29-207ENST00000568949 UROC1Q96N76 676 aa13.76□□□□□ -0.21
SNX29-207ENST00000568949 ADPGKQ9BRR6 497 aa13.76□□□□□ -0.21
SNX29-207ENST00000568949 C2orf40Q9H1Z8 148 aa13.76□□□□□ -0.21
SNX29-207ENST00000568949 CXCL16Q9H2A7 254 aa13.76□□□□□ -0.21
SNX29-207ENST00000568949 ZNF334Q9HCZ1 680 aaPredicted RBP13.76□□□□□ -0.21
SNX29-207ENST00000568949 PCDHA12Q9UN75 941 aa13.76□□□□□ -0.21
SNX29-207ENST00000568949 TRIP11Q15643 1979 aa13.75□□□□□ -0.21
SNX29-207ENST00000568949 TTLL13PA6NNM8 815 aa13.75□□□□□ -0.21
SNX29-207ENST00000568949 HRO43593 1189 aa13.75□□□□□ -0.21
SNX29-207ENST00000568949 USO1O60763 962 aaKnown RBP13.75□□□□□ -0.21
SNX29-207ENST00000568949 ABLIM3O94929 683 aa13.75□□□□□ -0.21
SNX29-207ENST00000568949 CHRNB1P11230 501 aa13.75□□□□□ -0.21
SNX29-207ENST00000568949 PSMC3P17980 439 aa13.75□□□□□ -0.21
SNX29-207ENST00000568949 TKTP29401 623 aaKnown RBP13.75□□□□□ -0.21
SNX29-207ENST00000568949 MLLT6P55198 1093 aaPredicted RBP13.75□□□□□ -0.21
SNX29-207ENST00000568949 ROR1Q01973 937 aa13.75□□□□□ -0.21
SNX29-207ENST00000568949 PRPF4BQ13523 1007 aaKnown RBP13.75□□□□□ -0.21
SNX29-207ENST00000568949 MAPK6Q16659 721 aa13.75□□□□□ -0.21
SNX29-207ENST00000568949 UPP1Q16831 310 aa13.75□□□□□ -0.21
SNX29-207ENST00000568949 NOSTRINQ8IVI9 506 aa13.75□□□□□ -0.21
SNX29-207ENST00000568949 SPEM1Q8N4L4 309 aa13.75□□□□□ -0.21
SNX29-207ENST00000568949 MCPH1Q8NEM0 835 aa13.75□□□□□ -0.21
SNX29-207ENST00000568949 PIGOQ8TEQ8 1089 aa13.75□□□□□ -0.21
SNX29-207ENST00000568949 ASB16Q96NS5 453 aa13.75□□□□□ -0.21
SNX29-207ENST00000568949 PPP1R10Q96QC0 940 aaKnown RBP13.75□□□□□ -0.21
SNX29-207ENST00000568949 ZSWIM6Q9HCJ5 1215 aa13.75□□□□□ -0.21
SNX29-207ENST00000568949 GPRC5CQ9NQ84 441 aa13.75□□□□□ -0.21
SNX29-207ENST00000568949 PIAS3Q9Y6X2 628 aa13.75□□□□□ -0.21
SNX29-207ENST00000568949 TICRRQ7Z2Z1 1910 aa13.74□□□□□ -0.21
SNX29-207ENST00000568949 WDR27A2RRH5 827 aa13.74□□□□□ -0.21
SNX29-207ENST00000568949 ACKR2O00590 384 aa13.74□□□□□ -0.21
SNX29-207ENST00000568949 PRRG1O14668 218 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms