RNA–Protein interactions for RNA: ENST00000568291.2

SF3B3-211, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 1,067 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-211ENST00000568291 DOCK8Q8NF50 2099 aa10.41□□□□□ -0.74
SF3B3-211ENST00000568291 CARNS1A5YM72 827 aa10.4□□□□□ -0.74
SF3B3-211ENST00000568291 I3L4J1 428 aa10.4□□□□□ -0.74
SF3B3-211ENST00000568291 INPPL1O15357 1258 aa10.4□□□□□ -0.74
SF3B3-211ENST00000568291 CUTAO60888 179 aa10.4□□□□□ -0.74
SF3B3-211ENST00000568291 PPP6R2O75170 966 aa10.4□□□□□ -0.74
SF3B3-211ENST00000568291 YEATS4O95619 227 aa10.4□□□□□ -0.74
SF3B3-211ENST00000568291 BRD1O95696 1058 aa10.4□□□□□ -0.74
SF3B3-211ENST00000568291 THP07101 528 aa10.4□□□□□ -0.74
SF3B3-211ENST00000568291 SPATA31D3P0C874 917 aa10.4□□□□□ -0.74
SF3B3-211ENST00000568291 EPCAMP16422 314 aa10.4□□□□□ -0.74
SF3B3-211ENST00000568291 RPL17P18621 184 aaKnown RBP10.4□□□□□ -0.74
SF3B3-211ENST00000568291 TXLNAP40222 546 aa10.4□□□□□ -0.74
SF3B3-211ENST00000568291 ZNF131P52739 623 aa10.4□□□□□ -0.74
SF3B3-211ENST00000568291 NCKAP1LP55160 1127 aa10.4□□□□□ -0.74
SF3B3-211ENST00000568291 SOX4Q06945 474 aaPredicted RBP10.4□□□□□ -0.74
SF3B3-211ENST00000568291 PTPN14Q15678 1187 aa10.4□□□□□ -0.74
SF3B3-211ENST00000568291 NAB2Q15742 525 aa10.4□□□□□ -0.74
SF3B3-211ENST00000568291 DCAF4L1Q3SXM0 396 aa10.4□□□□□ -0.74
SF3B3-211ENST00000568291 MPZL3Q6UWV2 235 aa10.4□□□□□ -0.74
SF3B3-211ENST00000568291 SPATA31D4Q6ZUB0 917 aa10.4□□□□□ -0.74
SF3B3-211ENST00000568291 UBALD2Q8IYN6 164 aa10.4□□□□□ -0.74
SF3B3-211ENST00000568291 GRAMD1CQ8IYS0 662 aa10.4□□□□□ -0.74
SF3B3-211ENST00000568291 GLIS3Q8NEA6 775 aa10.4□□□□□ -0.74
SF3B3-211ENST00000568291 DNAJC19Q96DA6 116 aa10.4□□□□□ -0.74
SF3B3-211ENST00000568291 TMEM175Q9BSA9 504 aa10.4□□□□□ -0.74
SF3B3-211ENST00000568291 TIPINQ9BVW5 301 aa10.4□□□□□ -0.74
SF3B3-211ENST00000568291 C17orf75Q9HAS0 396 aa10.4□□□□□ -0.74
SF3B3-211ENST00000568291 GDPD2Q9HCC8 539 aa10.4□□□□□ -0.74
SF3B3-211ENST00000568291 KCND2Q9NZV8 630 aa10.4□□□□□ -0.74
SF3B3-211ENST00000568291 LARSQ9P2J5 1176 aaKnown RBP10.4□□□□□ -0.74
SF3B3-211ENST00000568291 ODF2LQ9ULJ1 636 aa10.4□□□□□ -0.74
SF3B3-211ENST00000568291 TBX20Q9UMR3 447 aa10.4□□□□□ -0.74
SF3B3-211ENST00000568291 MTCL1Q9Y4B5 1905 aaKnown RBP10.4□□□□□ -0.74
SF3B3-211ENST00000568291 PTPRZ1P23471 2315 aaPredicted RBP10.4□□□□□ -0.74
SF3B3-211ENST00000568291 RIF1Q5UIP0 2472 aaKnown RBP10.4□□□□□ -0.75
SF3B3-211ENST00000568291 SMIM28A0A1B0GU29 152 aa10.39□□□□□ -0.75
SF3B3-211ENST00000568291 SLC26A4O43511 780 aa10.39□□□□□ -0.75
SF3B3-211ENST00000568291 GFRA3O60609 400 aa10.39□□□□□ -0.75
SF3B3-211ENST00000568291 TADA2AO75478 443 aa10.39□□□□□ -0.75
SF3B3-211ENST00000568291 TOM1L1O75674 476 aa10.39□□□□□ -0.75
SF3B3-211ENST00000568291 KIF4AO95239 1232 aa10.39□□□□□ -0.75
SF3B3-211ENST00000568291 ASGR2P07307 311 aa10.39□□□□□ -0.75
SF3B3-211ENST00000568291 CNPP09543 421 aaKnown RBP10.39□□□□□ -0.75
SF3B3-211ENST00000568291 CTSAP10619 480 aa10.39□□□□□ -0.75
SF3B3-211ENST00000568291 MCF2P10911 925 aa10.39□□□□□ -0.75
SF3B3-211ENST00000568291 PROZP22891 400 aa10.39□□□□□ -0.75
SF3B3-211ENST00000568291 GRM5P41594 1212 aa10.39□□□□□ -0.75
SF3B3-211ENST00000568291 LIG4P49917 911 aa10.39□□□□□ -0.75
SF3B3-211ENST00000568291 CLCNKBP51801 687 aa10.39□□□□□ -0.75
SF3B3-211ENST00000568291 CASP5P51878 434 aa10.39□□□□□ -0.75
SF3B3-211ENST00000568291 GRIK3Q13003 919 aa10.39□□□□□ -0.75
SF3B3-211ENST00000568291 TUSC3Q13454 348 aa10.39□□□□□ -0.75
SF3B3-211ENST00000568291 HSP90AA2PQ14568 343 aaPredicted RBP10.39□□□□□ -0.75
SF3B3-211ENST00000568291 E2F4Q16254 413 aa10.39□□□□□ -0.75
SF3B3-211ENST00000568291 SLC10A6Q3KNW5 377 aa10.39□□□□□ -0.75
SF3B3-211ENST00000568291 SLC39A4Q6P5W5 647 aa10.39□□□□□ -0.75
SF3B3-211ENST00000568291 PRSS55Q6UWB4 352 aaPredicted RBP10.39□□□□□ -0.75
SF3B3-211ENST00000568291 CCDC73Q6ZRK6 1079 aa10.39□□□□□ -0.75
SF3B3-211ENST00000568291 CEP57Q86XR8 500 aa10.39□□□□□ -0.75
SF3B3-211ENST00000568291 KCTD17Q8N5Z5 321 aa10.39□□□□□ -0.75
SF3B3-211ENST00000568291 ZSWIM2Q8NEG5 633 aa10.39□□□□□ -0.75
SF3B3-211ENST00000568291 ATOH1Q92858 354 aaPredicted RBP10.39□□□□□ -0.75
SF3B3-211ENST00000568291 FAM212AQ96EL1 285 aa10.39□□□□□ -0.75
SF3B3-211ENST00000568291 ACAP3Q96P50 834 aa10.39□□□□□ -0.75
SF3B3-211ENST00000568291 CCDC94Q9BW85 323 aaPredicted RBP10.39□□□□□ -0.75
SF3B3-211ENST00000568291 COLEC11Q9BWP8 271 aa10.39□□□□□ -0.75
SF3B3-211ENST00000568291 IRF2BPLQ9H1B7 796 aa10.39□□□□□ -0.75
SF3B3-211ENST00000568291 BLZF1Q9H2G9 400 aa10.39□□□□□ -0.75
SF3B3-211ENST00000568291 SMOC2Q9H3U7 446 aa10.39□□□□□ -0.75
SF3B3-211ENST00000568291 STK17AQ9UEE5 414 aa10.39□□□□□ -0.75
SF3B3-211ENST00000568291 RCOR1Q9UKL0 485 aa10.39□□□□□ -0.75
SF3B3-211ENST00000568291 HNRNPDLO14979 420 aaKnown RBP10.38□□□□□ -0.75
SF3B3-211ENST00000568291 POLR2DO15514 142 aaKnown RBP10.38□□□□□ -0.75
SF3B3-211ENST00000568291 CLDN3O15551 220 aa10.38□□□□□ -0.75
SF3B3-211ENST00000568291 GALR2O43603 387 aaPredicted RBP10.38□□□□□ -0.75
SF3B3-211ENST00000568291 LILRB3O75022 631 aa10.38□□□□□ -0.75
SF3B3-211ENST00000568291 NR1I2O75469 434 aa10.38□□□□□ -0.75
SF3B3-211ENST00000568291 CXCL8P10145 99 aa10.38□□□□□ -0.75
SF3B3-211ENST00000568291 CD44P16070 742 aaKnown RBP10.38□□□□□ -0.75
SF3B3-211ENST00000568291 KLRC2P26717 231 aa10.38□□□□□ -0.75
SF3B3-211ENST00000568291 AFMP43652 599 aa10.38□□□□□ -0.75
SF3B3-211ENST00000568291 BRCC3P46736 316 aa10.38□□□□□ -0.75
SF3B3-211ENST00000568291 GUCY2FP51841 1108 aa10.38□□□□□ -0.75
SF3B3-211ENST00000568291 NUBP1P53384 320 aa10.38□□□□□ -0.75
SF3B3-211ENST00000568291 YARSP54577 528 aaKnown RBP10.38□□□□□ -0.75
SF3B3-211ENST00000568291 RTP2Q5QGT7 225 aa10.38□□□□□ -0.75
SF3B3-211ENST00000568291 FUT10Q6P4F1 479 aa10.38□□□□□ -0.75
SF3B3-211ENST00000568291 CD300LGQ6UXG3 332 aa10.38□□□□□ -0.75
SF3B3-211ENST00000568291 ALKAL1Q6UXT8 129 aa10.38□□□□□ -0.75
SF3B3-211ENST00000568291 ZNF720Q7Z2F6 126 aa10.38□□□□□ -0.75
SF3B3-211ENST00000568291 PALB2Q86YC2 1186 aa10.38□□□□□ -0.75
SF3B3-211ENST00000568291 C3orf58Q8NDZ4 430 aa10.38□□□□□ -0.75
SF3B3-211ENST00000568291 SLC22A17Q8WUG5 538 aa10.38□□□□□ -0.75
SF3B3-211ENST00000568291 RIN2Q8WYP3 895 aaPredicted RBP10.38□□□□□ -0.75
SF3B3-211ENST00000568291 FAM84AQ96KN4 292 aa10.38□□□□□ -0.75
SF3B3-211ENST00000568291 KLHL5Q96PQ7 755 aa10.38□□□□□ -0.75
SF3B3-211ENST00000568291 PPP1R10Q96QC0 940 aaKnown RBP10.38□□□□□ -0.75
SF3B3-211ENST00000568291 SFXN1Q9H9B4 322 aa10.38□□□□□ -0.75
SF3B3-211ENST00000568291 MRPL44Q9H9J2 332 aaKnown RBP10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms