RNA–Protein interactions for RNA: ENST00000567737.1

SMG1-213, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 721 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-213ENST00000567737 RUFY2Q8WXA3 655 aa15.35■□□□□ 0.05
SMG1-213ENST00000567737 PSPC1Q8WXF1 523 aaKnown RBP15.35■□□□□ 0.05
SMG1-213ENST00000567737 SLC7A3Q8WY07 619 aa15.35■□□□□ 0.05
SMG1-213ENST00000567737 TCEAL3Q969E4 200 aa15.35■□□□□ 0.05
SMG1-213ENST00000567737 LENG9Q96B70 501 aa15.35■□□□□ 0.05
SMG1-213ENST00000567737 ASB16Q96NS5 453 aa15.35■□□□□ 0.05
SMG1-213ENST00000567737 SCUBE2Q9NQ36 999 aa15.35■□□□□ 0.05
SMG1-213ENST00000567737 NEUROG3Q9Y4Z2 214 aa15.35■□□□□ 0.05
SMG1-213ENST00000567737 WDR81Q562E7 1941 aa15.35■□□□□ 0.05
SMG1-213ENST00000567737 COL4A2P08572 1712 aa15.34■□□□□ 0.05
SMG1-213ENST00000567737 NOTCH4Q99466 2003 aa15.34■□□□□ 0.05
SMG1-213ENST00000567737 KPNA1P52294 538 aaPredicted RBP15.34■□□□□ 0.05
SMG1-213ENST00000567737 PCBP1Q15365 356 aaKnown RBP eCLIP15.34■□□□□ 0.05
SMG1-213ENST00000567737 E2F4Q16254 413 aa15.34■□□□□ 0.05
SMG1-213ENST00000567737 EXOC8Q8IYI6 725 aa15.34■□□□□ 0.05
SMG1-213ENST00000567737 GSTCDQ8NEC7 633 aa15.34■□□□□ 0.05
SMG1-213ENST00000567737 EXOC6Q8TAG9 804 aa15.34■□□□□ 0.05
SMG1-213ENST00000567737 FAM200AQ8TCP9 573 aa15.34■□□□□ 0.05
SMG1-213ENST00000567737 CSRNP2Q9H175 543 aa15.34■□□□□ 0.05
SMG1-213ENST00000567737 NXF3Q9H4D5 531 aaKnown RBP15.34■□□□□ 0.05
SMG1-213ENST00000567737 C8orf33Q9H7E9 229 aaPredicted RBP15.34■□□□□ 0.05
SMG1-213ENST00000567737 C2orf42Q9NWW7 574 aa15.34■□□□□ 0.05
SMG1-213ENST00000567737 CACNG4Q9UBN1 327 aa15.34■□□□□ 0.05
SMG1-213ENST00000567737 GCN1Q92616 2671 aaKnown RBP15.34■□□□□ 0.05
SMG1-213ENST00000567737 NBEAQ8NFP9 2946 aa15.33■□□□□ 0.05
SMG1-213ENST00000567737 TICRRQ7Z2Z1 1910 aa15.33■□□□□ 0.05
SMG1-213ENST00000567737 CASTOR2A6NHX0 329 aa15.33■□□□□ 0.04
SMG1-213ENST00000567737 TSPAN1O60635 241 aa15.33■□□□□ 0.04
SMG1-213ENST00000567737 AKAP3O75969 853 aa15.33■□□□□ 0.04
SMG1-213ENST00000567737 KIF4AO95239 1232 aa15.33■□□□□ 0.04
SMG1-213ENST00000567737 CSRP1P21291 193 aaKnown RBP15.33■□□□□ 0.04
SMG1-213ENST00000567737 AKAP5P24588 427 aa15.33■□□□□ 0.04
SMG1-213ENST00000567737 SPIRE1Q08AE8 756 aa15.33■□□□□ 0.04
SMG1-213ENST00000567737 LAMTOR4Q0VGL1 99 aa15.33■□□□□ 0.04
SMG1-213ENST00000567737 TUSC3Q13454 348 aa15.33■□□□□ 0.04
SMG1-213ENST00000567737 PRSS36Q5K4E3 855 aa15.33■□□□□ 0.04
SMG1-213ENST00000567737 PLA2G4FQ68DD2 849 aa15.33■□□□□ 0.04
SMG1-213ENST00000567737 KIAA1211LQ6NV74 962 aa15.33■□□□□ 0.04
SMG1-213ENST00000567737 PDZD4Q76G19 769 aaPredicted RBP15.33■□□□□ 0.04
SMG1-213ENST00000567737 CHD1LQ86WJ1 897 aa15.33■□□□□ 0.04
SMG1-213ENST00000567737 YAF2Q8IY57 180 aa15.33■□□□□ 0.04
SMG1-213ENST00000567737 REXO1Q8N1G1 1221 aaKnown RBP15.33■□□□□ 0.04
SMG1-213ENST00000567737 RNF149Q8NC42 400 aa15.33■□□□□ 0.04
SMG1-213ENST00000567737 SMARCD2Q92925 531 aa15.33■□□□□ 0.04
SMG1-213ENST00000567737 TMEM143Q96AN5 459 aa15.33■□□□□ 0.04
SMG1-213ENST00000567737 CPB2Q96IY4 423 aa15.33■□□□□ 0.04
SMG1-213ENST00000567737 CORO1BQ9BR76 489 aa15.33■□□□□ 0.04
SMG1-213ENST00000567737 PAAF1Q9BRP4 392 aa15.33■□□□□ 0.04
SMG1-213ENST00000567737 PARP2Q9UGN5 583 aa15.33■□□□□ 0.04
SMG1-213ENST00000567737 CCDC163A0A0D9SF12 145 aa15.32■□□□□ 0.04
SMG1-213ENST00000567737 WDR27A2RRH5 827 aa15.32■□□□□ 0.04
SMG1-213ENST00000567737 EIF4E1BA6NMX2 242 aaKnown RBP15.32■□□□□ 0.04
SMG1-213ENST00000567737 MICAL2O94851 1124 aa15.32■□□□□ 0.04
SMG1-213ENST00000567737 HOXC13P31276 330 aa15.32■□□□□ 0.04
SMG1-213ENST00000567737 PXNP49023 591 aaPredicted RBP15.32■□□□□ 0.04
SMG1-213ENST00000567737 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.32■□□□□ 0.04
SMG1-213ENST00000567737 ANO5Q75V66 913 aa15.32■□□□□ 0.04
SMG1-213ENST00000567737 PDZD3Q86UT5 571 aa15.32■□□□□ 0.04
SMG1-213ENST00000567737 SLC5A5Q92911 643 aa15.32■□□□□ 0.04
SMG1-213ENST00000567737 TCEAL4Q96EI5 215 aa15.32■□□□□ 0.04
SMG1-213ENST00000567737 ZC3H10Q96K80 434 aaKnown RBP15.32■□□□□ 0.04
SMG1-213ENST00000567737 C6orf50Q9HD87 102 aa15.32■□□□□ 0.04
SMG1-213ENST00000567737 KLK14Q9P0G3 267 aa15.32■□□□□ 0.04
SMG1-213ENST00000567737 MSRB2Q9Y3D2 182 aa15.32■□□□□ 0.04
SMG1-213ENST00000567737 CDY1Q9Y6F8 540 aa15.32■□□□□ 0.04
SMG1-213ENST00000567737 ZMYM2Q9UBW7 1377 aa15.32■□□□□ 0.04
SMG1-213ENST00000567737 SLC38A8A6NNN8 435 aa15.31■□□□□ 0.04
SMG1-213ENST00000567737 ARNTLO00327 626 aa15.31■□□□□ 0.04
SMG1-213ENST00000567737 NRG2O14511 850 aaPredicted RBP15.31■□□□□ 0.04
SMG1-213ENST00000567737 ASAP2O43150 1006 aa15.31■□□□□ 0.04
SMG1-213ENST00000567737 HYAL3O43820 417 aaPredicted RBP15.31■□□□□ 0.04
SMG1-213ENST00000567737 ELF1P32519 619 aa15.31■□□□□ 0.04
SMG1-213ENST00000567737 VIPR2P41587 438 aa15.31■□□□□ 0.04
SMG1-213ENST00000567737 CAMK2BQ13554 666 aa15.31■□□□□ 0.04
SMG1-213ENST00000567737 C19orf48Q6RUI8 117 aa15.31■□□□□ 0.04
SMG1-213ENST00000567737 SGMS1Q86VZ5 419 aa15.31■□□□□ 0.04
SMG1-213ENST00000567737 MFSD6LQ8IWD5 586 aa15.31■□□□□ 0.04
SMG1-213ENST00000567737 SYNPOQ8N3V7 929 aa15.31■□□□□ 0.04
SMG1-213ENST00000567737 CCDC136Q96JN2 1154 aa15.31■□□□□ 0.04
SMG1-213ENST00000567737 MTRRQ9UBK8 725 aa15.31■□□□□ 0.04
SMG1-213ENST00000567737 DSPP15924 2871 aaKnown RBP15.31■□□□□ 0.04
SMG1-213ENST00000567737 ESYT2A0FGR8 921 aa15.3■□□□□ 0.04
SMG1-213ENST00000567737 SPECC1L-ADORA2AF8WAN1 911 aa15.3■□□□□ 0.04
SMG1-213ENST00000567737 INO80B-WBP1J3KQ70 363 aa15.3■□□□□ 0.04
SMG1-213ENST00000567737 PRRG1O14668 218 aa15.3■□□□□ 0.04
SMG1-213ENST00000567737 CAVIN2O95810 425 aa15.3■□□□□ 0.04
SMG1-213ENST00000567737 RFC5P40937 340 aa15.3■□□□□ 0.04
SMG1-213ENST00000567737 SOX9P48436 509 aa15.3■□□□□ 0.04
SMG1-213ENST00000567737 PSMC5P62195 406 aa15.3■□□□□ 0.04
SMG1-213ENST00000567737 CREB5Q02930 508 aa15.3■□□□□ 0.04
SMG1-213ENST00000567737 FUT2Q10981 343 aa15.3■□□□□ 0.04
SMG1-213ENST00000567737 ELF2Q15723 593 aa15.3■□□□□ 0.04
SMG1-213ENST00000567737 RTN1Q16799 776 aa15.3■□□□□ 0.04
SMG1-213ENST00000567737 PLK5Q496M5 336 aa15.3■□□□□ 0.04
SMG1-213ENST00000567737 CYP4A22Q5TCH4 519 aa15.3■□□□□ 0.04
SMG1-213ENST00000567737 SDK1Q7Z5N4 2213 aa15.3■□□□□ 0.04
SMG1-213ENST00000567737 PLPP6Q8IY26 295 aa15.3■□□□□ 0.04
SMG1-213ENST00000567737 DMXL2Q8TDJ6 3036 aa15.3■□□□□ 0.04
SMG1-213ENST00000567737 CCDC12Q8WUD4 166 aaPredicted RBP15.3■□□□□ 0.04
SMG1-213ENST00000567737 TCP11Q8WWU5 503 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms