RNA–Protein interactions for RNA: ENST00000567720.5

COMMD4-220, Transcript of COMM domain containing 4, humanhuman

TSL 4

Gene COMMD4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-220ENST00000567720 FAM213AQ9BRX8 229 aa18.73■□□□□ 0.59
COMMD4-220ENST00000567720 KCTD10Q9H3F6 313 aa18.73■□□□□ 0.59
COMMD4-220ENST00000567720 PLEKHA5Q9HAU0 1116 aa18.73■□□□□ 0.59
COMMD4-220ENST00000567720 HSPBP1Q9NZL4 362 aa18.73■□□□□ 0.59
COMMD4-220ENST00000567720 FAN1Q9Y2M0 1017 aa18.73■□□□□ 0.59
COMMD4-220ENST00000567720 FSCN2O14926 492 aa18.72■□□□□ 0.59
COMMD4-220ENST00000567720 SLC34A2O95436 690 aa18.72■□□□□ 0.59
COMMD4-220ENST00000567720 EFEMP2O95967 443 aa18.72■□□□□ 0.59
COMMD4-220ENST00000567720 NFICP08651 508 aa18.72■□□□□ 0.59
COMMD4-220ENST00000567720 ERVFC1P60507 584 aa18.72■□□□□ 0.59
COMMD4-220ENST00000567720 HSP90AA2PQ14568 343 aaPredicted RBP18.72■□□□□ 0.59
COMMD4-220ENST00000567720 HS2ST1Q7LGA3 356 aa18.72■□□□□ 0.59
COMMD4-220ENST00000567720 RNF168Q8IYW5 571 aaPredicted RBP18.72■□□□□ 0.59
COMMD4-220ENST00000567720 GPD1LQ8N335 351 aa18.72■□□□□ 0.59
COMMD4-220ENST00000567720 C3orf58Q8NDZ4 430 aa18.72■□□□□ 0.59
COMMD4-220ENST00000567720 HASPINQ8TF76 798 aa18.72■□□□□ 0.59
COMMD4-220ENST00000567720 SMARCE1Q969G3 411 aa18.72■□□□□ 0.59
COMMD4-220ENST00000567720 GSDMAQ96QA5 445 aa18.72■□□□□ 0.59
COMMD4-220ENST00000567720 ZBP1Q9H171 429 aa18.72■□□□□ 0.59
COMMD4-220ENST00000567720 RMND1Q9NWS8 449 aa18.72■□□□□ 0.59
COMMD4-220ENST00000567720 HOOK1Q9UJC3 728 aaKnown RBP18.72■□□□□ 0.59
COMMD4-220ENST00000567720 CLIC2O15247 247 aa18.71■□□□□ 0.59
COMMD4-220ENST00000567720 EXTL3O43909 919 aa18.71■□□□□ 0.59
COMMD4-220ENST00000567720 SMC2O95347 1197 aa18.71■□□□□ 0.59
COMMD4-220ENST00000567720 ALDH2P05091 517 aa18.71■□□□□ 0.59
COMMD4-220ENST00000567720 IGFBP6P24592 240 aaPredicted RBP18.71■□□□□ 0.59
COMMD4-220ENST00000567720 CLCNKBP51801 687 aa18.71■□□□□ 0.59
COMMD4-220ENST00000567720 KRT17Q04695 432 aa18.71■□□□□ 0.59
COMMD4-220ENST00000567720 PLPP4Q5VZY2 271 aa18.71■□□□□ 0.59
COMMD4-220ENST00000567720 JADE1Q6IE81 842 aa18.71■□□□□ 0.59
COMMD4-220ENST00000567720 ADGRD2Q7Z7M1 963 aa18.71■□□□□ 0.59
COMMD4-220ENST00000567720 DDX53Q86TM3 631 aaKnown RBP18.71■□□□□ 0.59
COMMD4-220ENST00000567720 CBWD2Q8IUF1 395 aa18.71■□□□□ 0.59
COMMD4-220ENST00000567720 C12orf56Q8IXR9 622 aa18.71■□□□□ 0.59
COMMD4-220ENST00000567720 EFCAB13Q8IY85 973 aa18.71■□□□□ 0.59
COMMD4-220ENST00000567720 FAM212AQ96EL1 285 aa18.71■□□□□ 0.59
COMMD4-220ENST00000567720 KIF12Q96FN5 646 aa18.71■□□□□ 0.59
COMMD4-220ENST00000567720 TCF25Q9BQ70 676 aa18.71■□□□□ 0.59
COMMD4-220ENST00000567720 NSUN3Q9H649 340 aaKnown RBP18.71■□□□□ 0.59
COMMD4-220ENST00000567720 ENTPD7Q9NQZ7 604 aa18.71■□□□□ 0.59
COMMD4-220ENST00000567720 SLC38A7Q9NVC3 462 aa18.71■□□□□ 0.59
COMMD4-220ENST00000567720 RBAKQ9NYW8 714 aaPredicted RBP18.71■□□□□ 0.59
COMMD4-220ENST00000567720 ADAM28Q9UKQ2 775 aa18.71■□□□□ 0.59
COMMD4-220ENST00000567720 MAPK8IP1Q9UQF2 711 aa18.71■□□□□ 0.59
COMMD4-220ENST00000567720 KIAA0391O15091 583 aaKnown RBP18.7■□□□□ 0.58
COMMD4-220ENST00000567720 LDHAP00338 332 aaKnown RBP18.7■□□□□ 0.58
COMMD4-220ENST00000567720 CYP2J2P51589 502 aa18.7■□□□□ 0.58
COMMD4-220ENST00000567720 GUCY2FP51841 1108 aa18.7■□□□□ 0.58
COMMD4-220ENST00000567720 CCDC85BQ15834 202 aaPredicted RBP18.7■□□□□ 0.58
COMMD4-220ENST00000567720 ZBTB6Q15916 424 aa18.7■□□□□ 0.58
COMMD4-220ENST00000567720 UPP1Q16831 310 aa18.7■□□□□ 0.58
COMMD4-220ENST00000567720 TCEAL5Q5H9L2 206 aa18.7■□□□□ 0.58
COMMD4-220ENST00000567720 FUT10Q6P4F1 479 aa18.7■□□□□ 0.58
COMMD4-220ENST00000567720 GUF1Q8N442 669 aaKnown RBP18.7■□□□□ 0.58
COMMD4-220ENST00000567720 NOC3LQ8WTT2 800 aaKnown RBP18.7■□□□□ 0.58
COMMD4-220ENST00000567720 PPM1EQ8WY54 764 aa18.7■□□□□ 0.58
COMMD4-220ENST00000567720 FBXL18Q96ME1 805 aa18.7■□□□□ 0.58
COMMD4-220ENST00000567720 UROC1Q96N76 676 aa18.7■□□□□ 0.58
COMMD4-220ENST00000567720 HERC2P3Q9BVR0 1158 aa18.7■□□□□ 0.58
COMMD4-220ENST00000567720 MAN1B1Q9UKM7 699 aa18.7■□□□□ 0.58
COMMD4-220ENST00000567720 TMEM189-UBE2V1I3L0A0 370 aa18.69■□□□□ 0.58
COMMD4-220ENST00000567720 PODXLO00592 558 aa18.69■□□□□ 0.58
COMMD4-220ENST00000567720 SNRPFP62306 86 aaKnown RBP18.69■□□□□ 0.58
COMMD4-220ENST00000567720 POU5F1Q01860 360 aaKnown RBP18.69■□□□□ 0.58
COMMD4-220ENST00000567720 TMEM132DQ14C87 1099 aa18.69■□□□□ 0.58
COMMD4-220ENST00000567720 ZNF658Q5TYW1 1059 aaPredicted RBP18.69■□□□□ 0.58
COMMD4-220ENST00000567720 CD300LGQ6UXG3 332 aa18.69■□□□□ 0.58
COMMD4-220ENST00000567720 CD302Q8IX05 232 aa18.69■□□□□ 0.58
COMMD4-220ENST00000567720 VPS52Q8N1B4 723 aa18.69■□□□□ 0.58
COMMD4-220ENST00000567720 GOLGA5Q8TBA6 731 aa18.69■□□□□ 0.58
COMMD4-220ENST00000567720 AUTS2Q8WXX7 1259 aa18.69■□□□□ 0.58
COMMD4-220ENST00000567720 FAM84AQ96KN4 292 aa18.69■□□□□ 0.58
COMMD4-220ENST00000567720 COLEC11Q9BWP8 271 aa18.69■□□□□ 0.58
COMMD4-220ENST00000567720 GPR62Q9BZJ7 368 aa18.69■□□□□ 0.58
COMMD4-220ENST00000567720 ASB7Q9H672 318 aa18.69■□□□□ 0.58
COMMD4-220ENST00000567720 CGNQ9P2M7 1197 aaKnown RBP18.69■□□□□ 0.58
COMMD4-220ENST00000567720 PUF60Q9UHX1 559 aaKnown RBP18.69■□□□□ 0.58
COMMD4-220ENST00000567720 UBQLN1Q9UMX0 589 aaKnown RBP18.69■□□□□ 0.58
COMMD4-220ENST00000567720 HIDE1A8MVS5 230 aa18.68■□□□□ 0.58
COMMD4-220ENST00000567720 PDXKO00764 312 aa18.68■□□□□ 0.58
COMMD4-220ENST00000567720 IL18RAPO95256 599 aa18.68■□□□□ 0.58
COMMD4-220ENST00000567720 SOD2P04179 222 aa18.68■□□□□ 0.58
COMMD4-220ENST00000567720 CTSAP10619 480 aa18.68■□□□□ 0.58
COMMD4-220ENST00000567720 BMP6P22004 513 aa18.68■□□□□ 0.58
COMMD4-220ENST00000567720 PTPN14Q15678 1187 aa18.68■□□□□ 0.58
COMMD4-220ENST00000567720 SNRNP35Q16560 246 aaKnown RBP18.68■□□□□ 0.58
COMMD4-220ENST00000567720 CAMK4Q16566 473 aa18.68■□□□□ 0.58
COMMD4-220ENST00000567720 ZCWPW2Q504Y3 356 aa18.68■□□□□ 0.58
COMMD4-220ENST00000567720 COBLL1Q53SF7 1204 aa18.68■□□□□ 0.58
COMMD4-220ENST00000567720 TAS1R1Q7RTX1 841 aa18.68■□□□□ 0.58
COMMD4-220ENST00000567720 XXYLT1Q8NBI6 393 aa18.68■□□□□ 0.58
COMMD4-220ENST00000567720 GPT2Q8TD30 523 aa18.68■□□□□ 0.58
COMMD4-220ENST00000567720 B3GALT6Q96L58 329 aa18.68■□□□□ 0.58
COMMD4-220ENST00000567720 CLSTN2Q9H4D0 955 aa18.68■□□□□ 0.58
COMMD4-220ENST00000567720 DERAQ9Y315 318 aa18.68■□□□□ 0.58
COMMD4-220ENST00000567720 C2CD2Q9Y426 696 aa18.68■□□□□ 0.58
COMMD4-220ENST00000567720 MTCL1Q9Y4B5 1905 aaKnown RBP18.68■□□□□ 0.58
COMMD4-220ENST00000567720 SF3B1O75533 1304 aaKnown RBP eCLIP18.68■□□□□ 0.58
COMMD4-220ENST00000567720 PTPRJQ12913 1337 aa18.68■□□□□ 0.58
COMMD4-220ENST00000567720 PPEF2O14830 753 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms