RNA–Protein interactions for RNA: ENST00000567674.1

CDH3-206, Transcript of cadherin 3, humanhuman

TSL 3

Gene CDH3, Length 892 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-206ENST00000567674 TRIM67Q6ZTA4 783 aa12.23□□□□□ -0.45
CDH3-206ENST00000567674 SV2BQ7L1I2 683 aa12.23□□□□□ -0.45
CDH3-206ENST00000567674 TAS1R1Q7RTX1 841 aa12.23□□□□□ -0.45
CDH3-206ENST00000567674 CDR2LQ86X02 465 aaPredicted RBP12.23□□□□□ -0.45
CDH3-206ENST00000567674 MAP4K3Q8IVH8 894 aa12.23□□□□□ -0.45
CDH3-206ENST00000567674 RASSF8Q8NHQ8 419 aa12.23□□□□□ -0.45
CDH3-206ENST00000567674 LNX1Q8TBB1 728 aaPredicted RBP12.23□□□□□ -0.45
CDH3-206ENST00000567674 ZNF396Q96N95 335 aaPredicted RBP12.23□□□□□ -0.45
CDH3-206ENST00000567674 REEP2Q9BRK0 252 aa12.23□□□□□ -0.45
CDH3-206ENST00000567674 PYM1Q9BRP8 204 aaKnown RBP12.23□□□□□ -0.45
CDH3-206ENST00000567674 KIFC3Q9BVG8 833 aa12.23□□□□□ -0.45
CDH3-206ENST00000567674 TARS2Q9BW92 718 aaKnown RBP12.23□□□□□ -0.45
CDH3-206ENST00000567674 WDR6Q9NNW5 1121 aaKnown RBP12.23□□□□□ -0.45
CDH3-206ENST00000567674 OLFML3Q9NRN5 406 aa12.23□□□□□ -0.45
CDH3-206ENST00000567674 KLK14Q9P0G3 267 aa12.23□□□□□ -0.45
CDH3-206ENST00000567674 IGSF9Q9P2J2 1179 aa12.23□□□□□ -0.45
CDH3-206ENST00000567674 FBXO2Q9UK22 296 aaPredicted RBP12.23□□□□□ -0.45
CDH3-206ENST00000567674 TBX20Q9UMR3 447 aa12.23□□□□□ -0.45
CDH3-206ENST00000567674 SORCS3Q9UPU3 1222 aa12.23□□□□□ -0.45
CDH3-206ENST00000567674 STYXL1Q9Y6J8 313 aa12.23□□□□□ -0.45
CDH3-206ENST00000567674 H7C4K7 107 aa12.22□□□□□ -0.45
CDH3-206ENST00000567674 TGM5O43548 720 aa12.22□□□□□ -0.45
CDH3-206ENST00000567674 TBCAO75347 108 aaKnown RBP12.22□□□□□ -0.45
CDH3-206ENST00000567674 B3GAT3O94766 335 aa12.22□□□□□ -0.45
CDH3-206ENST00000567674 FAM13AO94988 1023 aa12.22□□□□□ -0.45
CDH3-206ENST00000567674 CSPG5O95196 566 aa12.22□□□□□ -0.45
CDH3-206ENST00000567674 KIF4AO95239 1232 aa12.22□□□□□ -0.45
CDH3-206ENST00000567674 YEATS4O95619 227 aa12.22□□□□□ -0.45
CDH3-206ENST00000567674 PLCG1P19174 1290 aa12.22□□□□□ -0.45
CDH3-206ENST00000567674 LRPAP1P30533 357 aa12.22□□□□□ -0.45
CDH3-206ENST00000567674 MTMR3Q13615 1198 aa12.22□□□□□ -0.45
CDH3-206ENST00000567674 ZRSR1Q15695 479 aaKnown RBP12.22□□□□□ -0.45
CDH3-206ENST00000567674 RRAGBQ5VZM2 374 aa12.22□□□□□ -0.45
CDH3-206ENST00000567674 CCDC149Q6ZUS6 474 aa12.22□□□□□ -0.45
CDH3-206ENST00000567674 GPBP1Q86WP2 473 aa12.22□□□□□ -0.45
CDH3-206ENST00000567674 NT5DC4Q86YG4 428 aa12.22□□□□□ -0.45
CDH3-206ENST00000567674 MYCT1Q8N699 235 aa12.22□□□□□ -0.45
CDH3-206ENST00000567674 TDRD5Q8NAT2 981 aaKnown RBP12.22□□□□□ -0.45
CDH3-206ENST00000567674 AUTS2Q8WXX7 1259 aa12.22□□□□□ -0.45
CDH3-206ENST00000567674 RIN2Q8WYP3 895 aaPredicted RBP12.22□□□□□ -0.45
CDH3-206ENST00000567674 PBXIP1Q96AQ6 731 aa12.22□□□□□ -0.45
CDH3-206ENST00000567674 RPGRIP1Q96KN7 1286 aa12.22□□□□□ -0.45
CDH3-206ENST00000567674 PRKD2Q9BZL6 878 aa12.22□□□□□ -0.45
CDH3-206ENST00000567674 POMKQ9H5K3 350 aa12.22□□□□□ -0.45
CDH3-206ENST00000567674 ASB7Q9H672 318 aa12.22□□□□□ -0.45
CDH3-206ENST00000567674 MAGEF1Q9HAY2 307 aa12.22□□□□□ -0.45
CDH3-206ENST00000567674 MAN1C1Q9NR34 630 aa12.22□□□□□ -0.45
CDH3-206ENST00000567674 MUTYHQ9UIF7 546 aa12.22□□□□□ -0.45
CDH3-206ENST00000567674 GDAQ9Y2T3 454 aa12.22□□□□□ -0.45
CDH3-206ENST00000567674 A0A0B4J269 797 aa12.21□□□□□ -0.45
CDH3-206ENST00000567674 CCDC195A0A1B0GUA6 201 aa12.21□□□□□ -0.45
CDH3-206ENST00000567674 TTC26A0AVF1 554 aa12.21□□□□□ -0.45
CDH3-206ENST00000567674 SPDYE4A6NLX3 237 aa12.21□□□□□ -0.45
CDH3-206ENST00000567674 SFI1A8K8P3 1242 aa12.21□□□□□ -0.45
CDH3-206ENST00000567674 KIAA0391O15091 583 aaKnown RBP12.21□□□□□ -0.45
CDH3-206ENST00000567674 OGTO15294 1046 aa12.21□□□□□ -0.45
CDH3-206ENST00000567674 ZMYND10O75800 440 aa12.21□□□□□ -0.45
CDH3-206ENST00000567674 KRT18P05783 430 aaKnown RBP12.21□□□□□ -0.45
CDH3-206ENST00000567674 LIG1P18858 919 aa12.21□□□□□ -0.45
CDH3-206ENST00000567674 CLCNKBP51801 687 aa12.21□□□□□ -0.45
CDH3-206ENST00000567674 RBM10P98175 930 aaKnown RBP12.21□□□□□ -0.45
CDH3-206ENST00000567674 AMPD3Q01432 767 aa12.21□□□□□ -0.45
CDH3-206ENST00000567674 MRPL58Q14197 206 aaKnown RBP12.21□□□□□ -0.45
CDH3-206ENST00000567674 KARSQ15046 597 aaKnown RBP12.21□□□□□ -0.45
CDH3-206ENST00000567674 ZBTB6Q15916 424 aa12.21□□□□□ -0.45
CDH3-206ENST00000567674 SLC10A6Q3KNW5 377 aa12.21□□□□□ -0.45
CDH3-206ENST00000567674 RARS2Q5T160 578 aaKnown RBP12.21□□□□□ -0.45
CDH3-206ENST00000567674 FAM171A1Q5VUB5 890 aa12.21□□□□□ -0.45
CDH3-206ENST00000567674 TPGS2Q68CL5 300 aa12.21□□□□□ -0.45
CDH3-206ENST00000567674 SLC8B1Q6J4K2 584 aa12.21□□□□□ -0.45
CDH3-206ENST00000567674 CNNM4Q6P4Q7 775 aa12.21□□□□□ -0.45
CDH3-206ENST00000567674 ZNF720Q7Z2F6 126 aa12.21□□□□□ -0.45
CDH3-206ENST00000567674 HSCBQ8IWL3 235 aa12.21□□□□□ -0.45
CDH3-206ENST00000567674 LINC00301Q8NCQ3 95 aa12.21□□□□□ -0.45
CDH3-206ENST00000567674 KREMEN2Q8NCW0 462 aa12.21□□□□□ -0.45
CDH3-206ENST00000567674 APPL2Q8NEU8 664 aa12.21□□□□□ -0.45
CDH3-206ENST00000567674 CLSTN3Q9BQT9 956 aa12.21□□□□□ -0.45
CDH3-206ENST00000567674 AVENQ9NQS1 362 aaPredicted RBP12.21□□□□□ -0.45
CDH3-206ENST00000567674 EPS15L1Q9UBC2 864 aa12.21□□□□□ -0.45
CDH3-206ENST00000567674 MTRRQ9UBK8 725 aa12.21□□□□□ -0.45
CDH3-206ENST00000567674 FBXW11Q9UKB1 542 aa12.21□□□□□ -0.45
CDH3-206ENST00000567674 CFAP45Q9UL16 551 aa12.21□□□□□ -0.45
CDH3-206ENST00000567674 UBQLN1Q9UMX0 589 aaKnown RBP12.21□□□□□ -0.45
CDH3-206ENST00000567674 EXOC7Q9UPT5 735 aa12.21□□□□□ -0.45
CDH3-206ENST00000567674 PCDHB13Q9Y5F0 798 aa12.21□□□□□ -0.45
CDH3-206ENST00000567674 CLIC4Q9Y696 253 aa12.21□□□□□ -0.45
CDH3-206ENST00000567674 FRMD3A2A2Y4 597 aa12.2□□□□□ -0.46
CDH3-206ENST00000567674 TMEM221A6NGB7 291 aa12.2□□□□□ -0.46
CDH3-206ENST00000567674 CASTOR2A6NHX0 329 aa12.2□□□□□ -0.46
CDH3-206ENST00000567674 PROB1E7EW31 1015 aa12.2□□□□□ -0.46
CDH3-206ENST00000567674 M0R296 226 aa12.2□□□□□ -0.46
CDH3-206ENST00000567674 C2CD2LO14523 706 aa12.2□□□□□ -0.46
CDH3-206ENST00000567674 HNRNPDLO14979 420 aaKnown RBP12.2□□□□□ -0.46
CDH3-206ENST00000567674 XYLBO75191 536 aa12.2□□□□□ -0.46
CDH3-206ENST00000567674 MICAL2O94851 1124 aa12.2□□□□□ -0.46
CDH3-206ENST00000567674 LDHAP00338 332 aaKnown RBP12.2□□□□□ -0.46
CDH3-206ENST00000567674 LIG4P49917 911 aa12.2□□□□□ -0.46
CDH3-206ENST00000567674 MCM6Q14566 821 aa12.2□□□□□ -0.46
CDH3-206ENST00000567674 PSMD5Q16401 504 aa12.2□□□□□ -0.46
CDH3-206ENST00000567674 RTP2Q5QGT7 225 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms