RNA–Protein interactions for RNA: ENST00000566600.1

NME3-209, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 913 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-209ENST00000566600 TMEM173Q86WV6 379 aaPredicted RBP28.4■■■□□ 2.14
NME3-209ENST00000566600 FAM212AQ96EL1 285 aa28.4■■■□□ 2.14
NME3-209ENST00000566600 KIF12Q96FN5 646 aa28.4■■■□□ 2.14
NME3-209ENST00000566600 CYP3A5P20815 502 aa28.39■■■□□ 2.14
NME3-209ENST00000566600 CAMK1Q14012 370 aa28.39■■■□□ 2.14
NME3-209ENST00000566600 MICAL1Q8TDZ2 1067 aa28.39■■■□□ 2.14
NME3-209ENST00000566600 NOC3LQ8WTT2 800 aaKnown RBP28.39■■■□□ 2.14
NME3-209ENST00000566600 ERCC4Q92889 916 aaPredicted RBP28.39■■■□□ 2.14
NME3-209ENST00000566600 PPP2R3CQ969Q6 453 aa28.39■■■□□ 2.14
NME3-209ENST00000566600 KCTD10Q9H3F6 313 aa28.39■■■□□ 2.14
NME3-209ENST00000566600 NGRNQ9NPE2 291 aaKnown RBP28.39■■■□□ 2.14
NME3-209ENST00000566600 MARCH5Q9NX47 278 aa28.39■■■□□ 2.14
NME3-209ENST00000566600 UBQLN1Q9UMX0 589 aaKnown RBP28.39■■■□□ 2.14
NME3-209ENST00000566600 RPL9P32969 192 aaKnown RBP28.38■■■□□ 2.13
NME3-209ENST00000566600 DCLRE1AQ6PJP8 1040 aa28.38■■■□□ 2.13
NME3-209ENST00000566600 BRSK2Q8IWQ3 736 aa28.38■■■□□ 2.13
NME3-209ENST00000566600 MICALL1Q8N3F8 863 aa28.38■■■□□ 2.13
NME3-209ENST00000566600 XXYLT1Q8NBI6 393 aa28.38■■■□□ 2.13
NME3-209ENST00000566600 MAFAQ8NHW3 353 aaPredicted RBP28.38■■■□□ 2.13
NME3-209ENST00000566600 TMEM174Q8WUU8 243 aa28.38■■■□□ 2.13
NME3-209ENST00000566600 BCL7CQ8WUZ0 217 aaPredicted RBP28.38■■■□□ 2.13
NME3-209ENST00000566600 NSUN3Q9H649 340 aaKnown RBP28.38■■■□□ 2.13
NME3-209ENST00000566600 ENTPD7Q9NQZ7 604 aa28.38■■■□□ 2.13
NME3-209ENST00000566600 RBAKQ9NYW8 714 aaPredicted RBP28.38■■■□□ 2.13
NME3-209ENST00000566600 ADAM28Q9UKQ2 775 aa28.38■■■□□ 2.13
NME3-209ENST00000566600 C2CD2Q9Y426 696 aa28.38■■■□□ 2.13
NME3-209ENST00000566600 PDCD11Q14690 1871 aaKnown RBP28.38■■■□□ 2.13
NME3-209ENST00000566600 GOLGA8IPA6NC78 632 aa28.37■■■□□ 2.13
NME3-209ENST00000566600 ZNF233A6NK53 670 aa28.37■■■□□ 2.13
NME3-209ENST00000566600 GOLGA8JA6NMD2 632 aa28.37■■■□□ 2.13
NME3-209ENST00000566600 CLIC2O15247 247 aa28.37■■■□□ 2.13
NME3-209ENST00000566600 CALUO43852 315 aaPredicted RBP28.37■■■□□ 2.13
NME3-209ENST00000566600 TADA2AO75478 443 aa28.37■■■□□ 2.13
NME3-209ENST00000566600 ZBTB6Q15916 424 aa28.37■■■□□ 2.13
NME3-209ENST00000566600 UPP1Q16831 310 aa28.37■■■□□ 2.13
NME3-209ENST00000566600 COBLL1Q53SF7 1204 aa28.37■■■□□ 2.13
NME3-209ENST00000566600 TMC7Q7Z402 723 aa28.37■■■□□ 2.13
NME3-209ENST00000566600 NT5DC4Q86YG4 428 aa28.37■■■□□ 2.13
NME3-209ENST00000566600 VPS52Q8N1B4 723 aa28.37■■■□□ 2.13
NME3-209ENST00000566600 FBXL18Q96ME1 805 aa28.37■■■□□ 2.13
NME3-209ENST00000566600 TCF25Q9BQ70 676 aa28.37■■■□□ 2.13
NME3-209ENST00000566600 MAPK8IP1Q9UQF2 711 aa28.37■■■□□ 2.13
NME3-209ENST00000566600 PRRC2BQ5JSZ5 2229 aaKnown RBP28.37■■■□□ 2.13
NME3-209ENST00000566600 TMEM189-UBE2V1I3L0A0 370 aa28.36■■■□□ 2.13
NME3-209ENST00000566600 CYP2J2P51589 502 aa28.36■■■□□ 2.13
NME3-209ENST00000566600 CLCNKBP51801 687 aa28.36■■■□□ 2.13
NME3-209ENST00000566600 ERVFC1P60507 584 aa28.36■■■□□ 2.13
NME3-209ENST00000566600 SOX4Q06945 474 aaPredicted RBP28.36■■■□□ 2.13
NME3-209ENST00000566600 TMEM132DQ14C87 1099 aa28.36■■■□□ 2.13
NME3-209ENST00000566600 SURF1Q15526 300 aa28.36■■■□□ 2.13
NME3-209ENST00000566600 JADE1Q6IE81 842 aa28.36■■■□□ 2.13
NME3-209ENST00000566600 BEST2Q8NFU1 509 aa28.36■■■□□ 2.13
NME3-209ENST00000566600 C18orf25Q96B23 403 aaPredicted RBP28.36■■■□□ 2.13
NME3-209ENST00000566600 PAAF1Q9BRP4 392 aa28.36■■■□□ 2.13
NME3-209ENST00000566600 TRAF3IP3Q9Y228 551 aa28.36■■■□□ 2.13
NME3-209ENST00000566600 FSCN2O14926 492 aa28.35■■■□□ 2.13
NME3-209ENST00000566600 PPP1R2P41236 205 aa28.35■■■□□ 2.13
NME3-209ENST00000566600 SPAG1Q07617 926 aa28.35■■■□□ 2.13
NME3-209ENST00000566600 ELAVL2Q12926 359 aaKnown RBP28.35■■■□□ 2.13
NME3-209ENST00000566600 STIM1Q13586 685 aa28.35■■■□□ 2.13
NME3-209ENST00000566600 MYBPC2Q14324 1141 aa28.35■■■□□ 2.13
NME3-209ENST00000566600 SMC1AQ14683 1233 aaKnown RBP28.35■■■□□ 2.13
NME3-209ENST00000566600 CAMK4Q16566 473 aa28.35■■■□□ 2.13
NME3-209ENST00000566600 SLC9A9Q8IVB4 645 aa28.35■■■□□ 2.13
NME3-209ENST00000566600 ZSWIM2Q8NEG5 633 aa28.35■■■□□ 2.13
NME3-209ENST00000566600 CLSTN2Q9H4D0 955 aa28.35■■■□□ 2.13
NME3-209ENST00000566600 GOLGA2P5Q9HBQ8 144 aa28.35■■■□□ 2.13
NME3-209ENST00000566600 CACNG4Q9UBN1 327 aa28.35■■■□□ 2.13
NME3-209ENST00000566600 MAN1B1Q9UKM7 699 aa28.35■■■□□ 2.13
NME3-209ENST00000566600 SF3B1O75533 1304 aaKnown RBP eCLIP28.35■■■□□ 2.13
NME3-209ENST00000566600 PODXLO00592 558 aa28.34■■■□□ 2.13
NME3-209ENST00000566600 EXOC3O60645 756 aa28.34■■■□□ 2.13
NME3-209ENST00000566600 B3GAT3O94766 335 aa28.34■■■□□ 2.13
NME3-209ENST00000566600 CSPG5O95196 566 aa28.34■■■□□ 2.13
NME3-209ENST00000566600 KIF4AO95239 1232 aa28.34■■■□□ 2.13
NME3-209ENST00000566600 SOD2P04179 222 aa28.34■■■□□ 2.13
NME3-209ENST00000566600 SNRNP35Q16560 246 aaKnown RBP28.34■■■□□ 2.13
NME3-209ENST00000566600 FUT10Q6P4F1 479 aa28.34■■■□□ 2.13
NME3-209ENST00000566600 SMYD4Q8IYR2 804 aaPredicted RBP28.34■■■□□ 2.13
NME3-209ENST00000566600 RABGGTAQ92696 567 aa28.34■■■□□ 2.13
NME3-209ENST00000566600 VN1R3Q9BXE9 311 aa28.34■■■□□ 2.13
NME3-209ENST00000566600 ZBP1Q9H171 429 aa28.34■■■□□ 2.13
NME3-209ENST00000566600 TUBGCP4Q9UGJ1 667 aa28.34■■■□□ 2.13
NME3-209ENST00000566600 SSX2IPQ9Y2D8 614 aa28.34■■■□□ 2.13
NME3-209ENST00000566600 F8W810 466 aa28.33■■■□□ 2.13
NME3-209ENST00000566600 TRAPPC3O43617 180 aa28.33■■■□□ 2.13
NME3-209ENST00000566600 EFEMP2O95967 443 aa28.33■■■□□ 2.13
NME3-209ENST00000566600 NR3C1P04150 777 aa28.33■■■□□ 2.13
NME3-209ENST00000566600 NFICP08651 508 aa28.33■■■□□ 2.13
NME3-209ENST00000566600 CTSAP10619 480 aa28.33■■■□□ 2.13
NME3-209ENST00000566600 LRPAP1P30533 357 aa28.33■■■□□ 2.13
NME3-209ENST00000566600 IRS1P35568 1242 aa28.33■■■□□ 2.13
NME3-209ENST00000566600 PRCPP42785 496 aa28.33■■■□□ 2.13
NME3-209ENST00000566600 CCDC85BQ15834 202 aaPredicted RBP28.33■■■□□ 2.13
NME3-209ENST00000566600 NFIL3Q16649 462 aa28.33■■■□□ 2.13
NME3-209ENST00000566600 SPATA1Q5VX52 437 aa28.33■■■□□ 2.13
NME3-209ENST00000566600 CBWD2Q8IUF1 395 aa28.33■■■□□ 2.13
NME3-209ENST00000566600 CACTINQ8WUQ7 758 aaKnown RBP28.33■■■□□ 2.13
NME3-209ENST00000566600 HERC2P3Q9BVR0 1158 aa28.33■■■□□ 2.13
NME3-209ENST00000566600 KIAA1468Q9P260 1216 aa28.33■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms