RNA–Protein interactions for RNA: ENST00000566557.5

SCAMP2-208, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 2

Gene SCAMP2, Length 585 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-208ENST00000566557 GPT2Q8TD30 523 aa17.78■□□□□ 0.44
SCAMP2-208ENST00000566557 KIF12Q96FN5 646 aa17.78■□□□□ 0.44
SCAMP2-208ENST00000566557 PLVAPQ9BX97 442 aa17.78■□□□□ 0.44
SCAMP2-208ENST00000566557 CD320Q9NPF0 282 aa17.78■□□□□ 0.44
SCAMP2-208ENST00000566557 HSPBP1Q9NZL4 362 aa17.78■□□□□ 0.44
SCAMP2-208ENST00000566557 CNTN3Q9P232 1028 aa17.78■□□□□ 0.44
SCAMP2-208ENST00000566557 CACNG4Q9UBN1 327 aa17.78■□□□□ 0.44
SCAMP2-208ENST00000566557 CALUO43852 315 aaPredicted RBP17.77■□□□□ 0.44
SCAMP2-208ENST00000566557 FGF18O76093 207 aa17.77■□□□□ 0.44
SCAMP2-208ENST00000566557 MBD3O95983 291 aa17.77■□□□□ 0.44
SCAMP2-208ENST00000566557 RB1P06400 928 aa17.77■□□□□ 0.44
SCAMP2-208ENST00000566557 TUSC3Q13454 348 aa17.77■□□□□ 0.44
SCAMP2-208ENST00000566557 STIM1Q13586 685 aa17.77■□□□□ 0.44
SCAMP2-208ENST00000566557 SLC10A6Q3KNW5 377 aa17.77■□□□□ 0.44
SCAMP2-208ENST00000566557 GUF1Q8N442 669 aaKnown RBP17.77■□□□□ 0.44
SCAMP2-208ENST00000566557 ZSWIM2Q8NEG5 633 aa17.77■□□□□ 0.44
SCAMP2-208ENST00000566557 SPATA20Q8TB22 786 aa17.77■□□□□ 0.44
SCAMP2-208ENST00000566557 RABGGTAQ92696 567 aa17.77■□□□□ 0.44
SCAMP2-208ENST00000566557 TMEM169Q96HH4 297 aa17.77■□□□□ 0.44
SCAMP2-208ENST00000566557 TMEM175Q9BSA9 504 aa17.77■□□□□ 0.44
SCAMP2-208ENST00000566557 ALG13Q9NP73 1137 aaKnown RBP17.77■□□□□ 0.44
SCAMP2-208ENST00000566557 RBAKQ9NYW8 714 aaPredicted RBP17.77■□□□□ 0.44
SCAMP2-208ENST00000566557 SPG21Q9NZD8 308 aa17.77■□□□□ 0.44
SCAMP2-208ENST00000566557 FAN1Q9Y2M0 1017 aa17.77■□□□□ 0.44
SCAMP2-208ENST00000566557 WDFY4Q6ZS81 3184 aa17.76■□□□□ 0.43
SCAMP2-208ENST00000566557 ANK1P16157 1881 aa17.76■□□□□ 0.43
SCAMP2-208ENST00000566557 SMIM28A0A1B0GU29 152 aa17.76■□□□□ 0.43
SCAMP2-208ENST00000566557 LACTBL1A8MY62 500 aa17.76■□□□□ 0.43
SCAMP2-208ENST00000566557 C5orf67F2Z3F1 127 aa17.76■□□□□ 0.43
SCAMP2-208ENST00000566557 H3BNC9 293 aa17.76■□□□□ 0.43
SCAMP2-208ENST00000566557 KIAA0391O15091 583 aaKnown RBP17.76■□□□□ 0.43
SCAMP2-208ENST00000566557 MEFVO15553 781 aaPredicted RBP17.76■□□□□ 0.43
SCAMP2-208ENST00000566557 EXTL3O43909 919 aa17.76■□□□□ 0.43
SCAMP2-208ENST00000566557 ITGB1P05556 798 aa17.76■□□□□ 0.43
SCAMP2-208ENST00000566557 GALTP07902 379 aa17.76■□□□□ 0.43
SCAMP2-208ENST00000566557 MRE11P49959 708 aa17.76■□□□□ 0.43
SCAMP2-208ENST00000566557 SNRPFP62306 86 aaKnown RBP17.76■□□□□ 0.43
SCAMP2-208ENST00000566557 DSC1Q08554 894 aa17.76■□□□□ 0.43
SCAMP2-208ENST00000566557 COLGALT2Q8IYK4 626 aa17.76■□□□□ 0.43
SCAMP2-208ENST00000566557 SLC39A11Q8N1S5 342 aa17.76■□□□□ 0.43
SCAMP2-208ENST00000566557 RDH13Q8NBN7 331 aa17.76■□□□□ 0.43
SCAMP2-208ENST00000566557 P2RX5Q93086 422 aa17.76■□□□□ 0.43
SCAMP2-208ENST00000566557 PPP1R10Q96QC0 940 aaKnown RBP17.76■□□□□ 0.43
SCAMP2-208ENST00000566557 GTPBP4Q9BZE4 634 aaKnown RBP17.76■□□□□ 0.43
SCAMP2-208ENST00000566557 KCTD10Q9H3F6 313 aa17.76■□□□□ 0.43
SCAMP2-208ENST00000566557 PLEKHA5Q9HAU0 1116 aa17.76■□□□□ 0.43
SCAMP2-208ENST00000566557 GOLGA2P5Q9HBQ8 144 aa17.76■□□□□ 0.43
SCAMP2-208ENST00000566557 SLC38A7Q9NVC3 462 aa17.76■□□□□ 0.43
SCAMP2-208ENST00000566557 CGNQ9P2M7 1197 aaKnown RBP17.76■□□□□ 0.43
SCAMP2-208ENST00000566557 TTC26A0AVF1 554 aa17.75■□□□□ 0.43
SCAMP2-208ENST00000566557 CARNS1A5YM72 827 aa17.75■□□□□ 0.43
SCAMP2-208ENST00000566557 PRR33A8MZF0 331 aa17.75■□□□□ 0.43
SCAMP2-208ENST00000566557 PDXKO00764 312 aa17.75■□□□□ 0.43
SCAMP2-208ENST00000566557 NRP1O14786 923 aa17.75■□□□□ 0.43
SCAMP2-208ENST00000566557 GRM6O15303 877 aa17.75■□□□□ 0.43
SCAMP2-208ENST00000566557 EXOC3O60645 756 aa17.75■□□□□ 0.43
SCAMP2-208ENST00000566557 ALDH2P05091 517 aa17.75■□□□□ 0.43
SCAMP2-208ENST00000566557 KCNE1P15382 129 aa17.75■□□□□ 0.43
SCAMP2-208ENST00000566557 CA8P35219 290 aa17.75■□□□□ 0.43
SCAMP2-208ENST00000566557 PRCPP42785 496 aa17.75■□□□□ 0.43
SCAMP2-208ENST00000566557 KRT17Q04695 432 aa17.75■□□□□ 0.43
SCAMP2-208ENST00000566557 JADE1Q6IE81 842 aa17.75■□□□□ 0.43
SCAMP2-208ENST00000566557 CRELD2Q6UXH1 353 aaPredicted RBP17.75■□□□□ 0.43
SCAMP2-208ENST00000566557 BRSK2Q8IWQ3 736 aa17.75■□□□□ 0.43
SCAMP2-208ENST00000566557 XXYLT1Q8NBI6 393 aa17.75■□□□□ 0.43
SCAMP2-208ENST00000566557 HASPINQ8TF76 798 aa17.75■□□□□ 0.43
SCAMP2-208ENST00000566557 C18orf25Q96B23 403 aaPredicted RBP17.75■□□□□ 0.43
SCAMP2-208ENST00000566557 ZMAT2Q96NC0 199 aaKnown RBP17.75■□□□□ 0.43
SCAMP2-208ENST00000566557 KIAA1468Q9P260 1216 aa17.75■□□□□ 0.43
SCAMP2-208ENST00000566557 TUBGCP4Q9UGJ1 667 aa17.75■□□□□ 0.43
SCAMP2-208ENST00000566557 ZNF233A6NK53 670 aa17.74■□□□□ 0.43
SCAMP2-208ENST00000566557 XPOTO43592 962 aaKnown RBP17.74■□□□□ 0.43
SCAMP2-208ENST00000566557 IL18RAPO95256 599 aa17.74■□□□□ 0.43
SCAMP2-208ENST00000566557 NR3C1P04150 777 aa17.74■□□□□ 0.43
SCAMP2-208ENST00000566557 NFICP08651 508 aa17.74■□□□□ 0.43
SCAMP2-208ENST00000566557 MORC3Q14149 939 aa17.74■□□□□ 0.43
SCAMP2-208ENST00000566557 HSP90AA2PQ14568 343 aaPredicted RBP17.74■□□□□ 0.43
SCAMP2-208ENST00000566557 TMEM132DQ14C87 1099 aa17.74■□□□□ 0.43
SCAMP2-208ENST00000566557 PTPROQ16827 1216 aa17.74■□□□□ 0.43
SCAMP2-208ENST00000566557 XKR4Q5GH76 650 aa17.74■□□□□ 0.43
SCAMP2-208ENST00000566557 KLHL10Q6JEL2 608 aa17.74■□□□□ 0.43
SCAMP2-208ENST00000566557 ALKAL1Q6UXT8 129 aa17.74■□□□□ 0.43
SCAMP2-208ENST00000566557 TMEM173Q86WV6 379 aaPredicted RBP17.74■□□□□ 0.43
SCAMP2-208ENST00000566557 CBWD2Q8IUF1 395 aa17.74■□□□□ 0.43
SCAMP2-208ENST00000566557 CD302Q8IX05 232 aa17.74■□□□□ 0.43
SCAMP2-208ENST00000566557 BCL7CQ8WUZ0 217 aaPredicted RBP17.74■□□□□ 0.43
SCAMP2-208ENST00000566557 POF1BQ8WVV4 589 aa17.74■□□□□ 0.43
SCAMP2-208ENST00000566557 IGSF21Q96ID5 467 aa17.74■□□□□ 0.43
SCAMP2-208ENST00000566557 TSG101Q99816 390 aa17.74■□□□□ 0.43
SCAMP2-208ENST00000566557 PAAF1Q9BRP4 392 aa17.74■□□□□ 0.43
SCAMP2-208ENST00000566557 COLEC11Q9BWP8 271 aa17.74■□□□□ 0.43
SCAMP2-208ENST00000566557 KIAA1586Q9HCI6 787 aa17.74■□□□□ 0.43
SCAMP2-208ENST00000566557 F8W810 466 aa17.73■□□□□ 0.43
SCAMP2-208ENST00000566557 PSMA7O14818 248 aa17.73■□□□□ 0.43
SCAMP2-208ENST00000566557 SOX4Q06945 474 aaPredicted RBP17.73■□□□□ 0.43
SCAMP2-208ENST00000566557 NAB2Q15742 525 aa17.73■□□□□ 0.43
SCAMP2-208ENST00000566557 SNRNP35Q16560 246 aaKnown RBP17.73■□□□□ 0.43
SCAMP2-208ENST00000566557 CEP135Q66GS9 1140 aa17.73■□□□□ 0.43
SCAMP2-208ENST00000566557 C12orf56Q8IXR9 622 aa17.73■□□□□ 0.43
SCAMP2-208ENST00000566557 BEST2Q8NFU1 509 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms