RNA–Protein interactions for RNA: ENST00000566016.5

SHCBP1-205, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 1 (best)

Gene SHCBP1, Length 1,482 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-205ENST00000566016 FSCN2O14926 492 aa22.91■■□□□ 1.26
SHCBP1-205ENST00000566016 ZBTB6Q15916 424 aa22.91■■□□□ 1.26
SHCBP1-205ENST00000566016 RNF168Q8IYW5 571 aaPredicted RBP22.91■■□□□ 1.26
SHCBP1-205ENST00000566016 GUF1Q8N442 669 aaKnown RBP22.91■■□□□ 1.26
SHCBP1-205ENST00000566016 SMARCE1Q969G3 411 aa22.91■■□□□ 1.26
SHCBP1-205ENST00000566016 KCTD10Q9H3F6 313 aa22.91■■□□□ 1.26
SHCBP1-205ENST00000566016 NSUN3Q9H649 340 aaKnown RBP22.91■■□□□ 1.26
SHCBP1-205ENST00000566016 KIAA1586Q9HCI6 787 aa22.91■■□□□ 1.26
SHCBP1-205ENST00000566016 DERAQ9Y315 318 aa22.91■■□□□ 1.26
SHCBP1-205ENST00000566016 CASTOR2A6NHX0 329 aa22.9■■□□□ 1.26
SHCBP1-205ENST00000566016 IL18RAPO95256 599 aa22.9■■□□□ 1.26
SHCBP1-205ENST00000566016 COBLL1Q53SF7 1204 aa22.9■■□□□ 1.26
SHCBP1-205ENST00000566016 BRSK2Q8IWQ3 736 aa22.9■■□□□ 1.26
SHCBP1-205ENST00000566016 GPD1LQ8N335 351 aa22.9■■□□□ 1.26
SHCBP1-205ENST00000566016 DDX27Q96GQ7 796 aaKnown RBP22.9■■□□□ 1.26
SHCBP1-205ENST00000566016 FBXL18Q96ME1 805 aa22.9■■□□□ 1.26
SHCBP1-205ENST00000566016 FAM213AQ9BRX8 229 aa22.9■■□□□ 1.26
SHCBP1-205ENST00000566016 NGRNQ9NPE2 291 aaKnown RBP22.9■■□□□ 1.26
SHCBP1-205ENST00000566016 HSPBP1Q9NZL4 362 aa22.9■■□□□ 1.26
SHCBP1-205ENST00000566016 ADAM28Q9UKQ2 775 aa22.9■■□□□ 1.26
SHCBP1-205ENST00000566016 C2CD2Q9Y426 696 aa22.9■■□□□ 1.26
SHCBP1-205ENST00000566016 VWA8A3KMH1 1905 aa22.89■■□□□ 1.25
SHCBP1-205ENST00000566016 LACTBL1A8MY62 500 aa22.89■■□□□ 1.25
SHCBP1-205ENST00000566016 GOLGA6L22H0YM25 854 aa22.89■■□□□ 1.25
SHCBP1-205ENST00000566016 PDXKO00764 312 aa22.89■■□□□ 1.25
SHCBP1-205ENST00000566016 XPOTO43592 962 aaKnown RBP22.89■■□□□ 1.25
SHCBP1-205ENST00000566016 CYP3A5P20815 502 aa22.89■■□□□ 1.25
SHCBP1-205ENST00000566016 SOX4Q06945 474 aaPredicted RBP22.89■■□□□ 1.25
SHCBP1-205ENST00000566016 UPP1Q16831 310 aa22.89■■□□□ 1.25
SHCBP1-205ENST00000566016 NT5DC4Q86YG4 428 aa22.89■■□□□ 1.25
SHCBP1-205ENST00000566016 PPP2R3CQ969Q6 453 aa22.89■■□□□ 1.25
SHCBP1-205ENST00000566016 SAAL1Q96ER3 474 aa22.89■■□□□ 1.25
SHCBP1-205ENST00000566016 TCF25Q9BQ70 676 aa22.89■■□□□ 1.25
SHCBP1-205ENST00000566016 PAAF1Q9BRP4 392 aa22.89■■□□□ 1.25
SHCBP1-205ENST00000566016 VN1R3Q9BXE9 311 aa22.89■■□□□ 1.25
SHCBP1-205ENST00000566016 LMBRD1Q9NUN5 540 aa22.89■■□□□ 1.25
SHCBP1-205ENST00000566016 UBQLN1Q9UMX0 589 aaKnown RBP22.89■■□□□ 1.25
SHCBP1-205ENST00000566016 IRAK3Q9Y616 596 aa22.89■■□□□ 1.25
SHCBP1-205ENST00000566016 SF3B1O75533 1304 aaKnown RBP eCLIP22.88■■□□□ 1.256e-6■■■■■ 103.4
SHCBP1-205ENST00000566016 RPL9P32969 192 aaKnown RBP22.88■■□□□ 1.25
SHCBP1-205ENST00000566016 IRS1P35568 1242 aa22.88■■□□□ 1.25
SHCBP1-205ENST00000566016 ERVFC1P60507 584 aa22.88■■□□□ 1.25
SHCBP1-205ENST00000566016 BMS1Q14692 1282 aaKnown RBP22.88■■□□□ 1.25
SHCBP1-205ENST00000566016 ZNF658Q5TYW1 1059 aaPredicted RBP22.88■■□□□ 1.25
SHCBP1-205ENST00000566016 SLC9A9Q8IVB4 645 aa22.88■■□□□ 1.25
SHCBP1-205ENST00000566016 VPS52Q8N1B4 723 aa22.88■■□□□ 1.25
SHCBP1-205ENST00000566016 KIF12Q96FN5 646 aa22.88■■□□□ 1.25
SHCBP1-205ENST00000566016 ZBP1Q9H171 429 aa22.88■■□□□ 1.25
SHCBP1-205ENST00000566016 RBAKQ9NYW8 714 aaPredicted RBP22.88■■□□□ 1.25
SHCBP1-205ENST00000566016 KIF4AO95239 1232 aa22.87■■□□□ 1.25
SHCBP1-205ENST00000566016 SOD2P04179 222 aa22.87■■□□□ 1.25
SHCBP1-205ENST00000566016 CTSAP10619 480 aa22.87■■□□□ 1.25
SHCBP1-205ENST00000566016 GPR65Q8IYL9 337 aa22.87■■□□□ 1.25
SHCBP1-205ENST00000566016 XXYLT1Q8NBI6 393 aa22.87■■□□□ 1.25
SHCBP1-205ENST00000566016 C18orf25Q96B23 403 aaPredicted RBP22.87■■□□□ 1.25
SHCBP1-205ENST00000566016 PCIF1Q9H4Z3 704 aa22.87■■□□□ 1.25
SHCBP1-205ENST00000566016 GOLGA2P5Q9HBQ8 144 aa22.87■■□□□ 1.25
SHCBP1-205ENST00000566016 ENTPD7Q9NQZ7 604 aa22.87■■□□□ 1.25
SHCBP1-205ENST00000566016 CACNG4Q9UBN1 327 aa22.87■■□□□ 1.25
SHCBP1-205ENST00000566016 TRAF3IP3Q9Y228 551 aa22.87■■□□□ 1.25
SHCBP1-205ENST00000566016 FSD2A1L4K1 749 aa22.86■■□□□ 1.25
SHCBP1-205ENST00000566016 F8W810 466 aa22.86■■□□□ 1.25
SHCBP1-205ENST00000566016 LRPAP1P30533 357 aa22.86■■□□□ 1.25
SHCBP1-205ENST00000566016 CLCNKBP51801 687 aa22.86■■□□□ 1.25
SHCBP1-205ENST00000566016 MYBPC2Q14324 1141 aa22.86■■□□□ 1.25
SHCBP1-205ENST00000566016 SMC1AQ14683 1233 aaKnown RBP22.86■■□□□ 1.25
SHCBP1-205ENST00000566016 COL19A1Q14993 1142 aa22.86■■□□□ 1.25
SHCBP1-205ENST00000566016 TMEM132DQ14C87 1099 aa22.86■■□□□ 1.25
SHCBP1-205ENST00000566016 FUT10Q6P4F1 479 aa22.86■■□□□ 1.25
SHCBP1-205ENST00000566016 DCLRE1AQ6PJP8 1040 aa22.86■■□□□ 1.25
SHCBP1-205ENST00000566016 TMC7Q7Z402 723 aa22.86■■□□□ 1.25
SHCBP1-205ENST00000566016 MICALL1Q8N3F8 863 aa22.86■■□□□ 1.25
SHCBP1-205ENST00000566016 ZSWIM2Q8NEG5 633 aa22.86■■□□□ 1.25
SHCBP1-205ENST00000566016 HERC2P3Q9BVR0 1158 aa22.86■■□□□ 1.25
SHCBP1-205ENST00000566016 XIRP2A4UGR9 3374 aa22.86■■□□□ 1.25
SHCBP1-205ENST00000566016 ZNF233A6NK53 670 aa22.85■■□□□ 1.25
SHCBP1-205ENST00000566016 B3GAT3O94766 335 aa22.85■■□□□ 1.25
SHCBP1-205ENST00000566016 ELAVL2Q12926 359 aaKnown RBP22.85■■□□□ 1.25
SHCBP1-205ENST00000566016 NFIL3Q16649 462 aa22.85■■□□□ 1.25
SHCBP1-205ENST00000566016 TCEAL5Q5H9L2 206 aa22.85■■□□□ 1.25
SHCBP1-205ENST00000566016 SPATA1Q5VX52 437 aa22.85■■□□□ 1.25
SHCBP1-205ENST00000566016 JADE1Q6IE81 842 aa22.85■■□□□ 1.25
SHCBP1-205ENST00000566016 ERCC4Q92889 916 aaPredicted RBP22.85■■□□□ 1.25
SHCBP1-205ENST00000566016 TUBGCP4Q9UGJ1 667 aa22.85■■□□□ 1.25
SHCBP1-205ENST00000566016 UNC80Q8N2C7 3258 aa22.85■■□□□ 1.25
SHCBP1-205ENST00000566016 SCN1AP35498 2009 aa22.85■■□□□ 1.25
SHCBP1-205ENST00000566016 GOLGA8IPA6NC78 632 aa22.85■■□□□ 1.25
SHCBP1-205ENST00000566016 GOLGA8JA6NMD2 632 aa22.85■■□□□ 1.25
SHCBP1-205ENST00000566016 PODXLO00592 558 aa22.85■■□□□ 1.25
SHCBP1-205ENST00000566016 NCK2O43639 380 aa22.85■■□□□ 1.25
SHCBP1-205ENST00000566016 TADA2AO75478 443 aa22.85■■□□□ 1.25
SHCBP1-205ENST00000566016 NFICP08651 508 aa22.85■■□□□ 1.25
SHCBP1-205ENST00000566016 SNRNP35Q16560 246 aaKnown RBP22.85■■□□□ 1.25
SHCBP1-205ENST00000566016 CBWD2Q8IUF1 395 aa22.85■■□□□ 1.25
SHCBP1-205ENST00000566016 MRPL43Q8N983 215 aaKnown RBP22.85■■□□□ 1.25
SHCBP1-205ENST00000566016 BEST2Q8NFU1 509 aa22.85■■□□□ 1.25
SHCBP1-205ENST00000566016 MICAL1Q8TDZ2 1067 aa22.85■■□□□ 1.25
SHCBP1-205ENST00000566016 RABGGTAQ92696 567 aa22.85■■□□□ 1.25
SHCBP1-205ENST00000566016 FAM212AQ96EL1 285 aa22.85■■□□□ 1.25
SHCBP1-205ENST00000566016 CDCA3Q99618 268 aaPredicted RBP22.85■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms