RNA–Protein interactions for RNA: ENST00000565990.2

SF3B3-206, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-206ENST00000565990 DERAQ9Y315 318 aa13.7□□□□□ -0.22
SF3B3-206ENST00000565990 PCDHA11Q9Y5I1 949 aa13.7□□□□□ -0.22
SF3B3-206ENST00000565990 GOLGA6L19H0YKK7 550 aa13.69□□□□□ -0.22
SF3B3-206ENST00000565990 SLC16A3O15427 465 aaKnown RBP13.69□□□□□ -0.22
SF3B3-206ENST00000565990 IL18RAPO95256 599 aa13.69□□□□□ -0.22
SF3B3-206ENST00000565990 MARSP56192 900 aaKnown RBP13.69□□□□□ -0.22
SF3B3-206ENST00000565990 WNT7BP56706 349 aa13.69□□□□□ -0.22
SF3B3-206ENST00000565990 CYP24A1Q07973 514 aa13.69□□□□□ -0.22
SF3B3-206ENST00000565990 PSMD6Q15008 389 aa13.69□□□□□ -0.22
SF3B3-206ENST00000565990 SURF1Q15526 300 aa13.69□□□□□ -0.22
SF3B3-206ENST00000565990 LRIT3Q3SXY7 679 aa13.69□□□□□ -0.22
SF3B3-206ENST00000565990 NOMO2Q5JPE7 1267 aa13.69□□□□□ -0.22
SF3B3-206ENST00000565990 FAM109BQ6ICB4 259 aaPredicted RBP13.69□□□□□ -0.22
SF3B3-206ENST00000565990 NT5DC4Q86YG4 428 aa13.69□□□□□ -0.22
SF3B3-206ENST00000565990 IRF2BP1Q8IU81 584 aa13.69□□□□□ -0.22
SF3B3-206ENST00000565990 CSGALNACT2Q8N6G5 542 aa13.69□□□□□ -0.22
SF3B3-206ENST00000565990 TMC2Q8TDI7 906 aa13.69□□□□□ -0.22
SF3B3-206ENST00000565990 PARD3BQ8TEW8 1205 aa13.69□□□□□ -0.22
SF3B3-206ENST00000565990 PPP1R10Q96QC0 940 aaKnown RBP13.69□□□□□ -0.22
SF3B3-206ENST00000565990 APOL6Q9BWW8 343 aa13.69□□□□□ -0.22
SF3B3-206ENST00000565990 DNAJC25Q9H1X3 360 aa13.69□□□□□ -0.22
SF3B3-206ENST00000565990 CWH43Q9H720 699 aa13.69□□□□□ -0.22
SF3B3-206ENST00000565990 KCND1Q9NSA2 647 aa13.69□□□□□ -0.22
SF3B3-206ENST00000565990 RBAKQ9NYW8 714 aaPredicted RBP13.69□□□□□ -0.22
SF3B3-206ENST00000565990 C2CD2Q9Y426 696 aa13.69□□□□□ -0.22
SF3B3-206ENST00000565990 TBKBP1A7MCY6 615 aa13.68□□□□□ -0.22
SF3B3-206ENST00000565990 GRXCR1A8MXD5 290 aa13.68□□□□□ -0.22
SF3B3-206ENST00000565990 IKBKBO14920 756 aa13.68□□□□□ -0.22
SF3B3-206ENST00000565990 FGFR1OPO95684 399 aaKnown RBP13.68□□□□□ -0.22
SF3B3-206ENST00000565990 GNA14O95837 355 aa13.68□□□□□ -0.22
SF3B3-206ENST00000565990 THP07101 528 aa13.68□□□□□ -0.22
SF3B3-206ENST00000565990 LINC00271P0C7V0 271 aa13.68□□□□□ -0.22
SF3B3-206ENST00000565990 MLH1P40692 756 aa13.68□□□□□ -0.22
SF3B3-206ENST00000565990 GATMP50440 423 aa13.68□□□□□ -0.22
SF3B3-206ENST00000565990 DSC1Q08554 894 aa13.68□□□□□ -0.22
SF3B3-206ENST00000565990 NCAPHQ15003 741 aa13.68□□□□□ -0.22
SF3B3-206ENST00000565990 IQCB1Q15051 598 aa13.68□□□□□ -0.22
SF3B3-206ENST00000565990 DNTTIP2Q5QJE6 756 aaKnown RBP13.68□□□□□ -0.22
SF3B3-206ENST00000565990 INTS8Q75QN2 995 aaKnown RBP13.68□□□□□ -0.22
SF3B3-206ENST00000565990 FRMD5Q7Z6J6 570 aa13.68□□□□□ -0.22
SF3B3-206ENST00000565990 ABI1Q8IZP0 508 aa13.68□□□□□ -0.22
SF3B3-206ENST00000565990 PLEKHO2Q8TD55 490 aa13.68□□□□□ -0.22
SF3B3-206ENST00000565990 NOC3LQ8WTT2 800 aaKnown RBP13.68□□□□□ -0.22
SF3B3-206ENST00000565990 CLP1Q92989 425 aaKnown RBP13.68□□□□□ -0.22
SF3B3-206ENST00000565990 EEF2KMTQ96G04 330 aa13.68□□□□□ -0.22
SF3B3-206ENST00000565990 ZBED2Q9BTP6 218 aa13.68□□□□□ -0.22
SF3B3-206ENST00000565990 MRPL9Q9BYD2 267 aaKnown RBP13.68□□□□□ -0.22
SF3B3-206ENST00000565990 THAP9Q9H5L6 903 aa13.68□□□□□ -0.22
SF3B3-206ENST00000565990 TBC1D13Q9NVG8 400 aa13.68□□□□□ -0.22
SF3B3-206ENST00000565990 PLAGL2Q9UPG8 496 aa13.68□□□□□ -0.22
SF3B3-206ENST00000565990 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.68□□□□□ -0.22
SF3B3-206ENST00000565990 KIAA1671Q9BY89 1806 aa13.67□□□□□ -0.22
SF3B3-206ENST00000565990 LRRC10BA6NIK2 292 aa13.67□□□□□ -0.22
SF3B3-206ENST00000565990 TLL1O43897 1013 aa13.67□□□□□ -0.22
SF3B3-206ENST00000565990 DDHD2O94830 711 aa13.67□□□□□ -0.22
SF3B3-206ENST00000565990 POMCP01189 267 aa13.67□□□□□ -0.22
SF3B3-206ENST00000565990 TUBB4AP04350 444 aa13.67□□□□□ -0.22
SF3B3-206ENST00000565990 CYP3A5P20815 502 aa13.67□□□□□ -0.22
SF3B3-206ENST00000565990 SCNN1GP51170 649 aa13.67□□□□□ -0.22
SF3B3-206ENST00000565990 RABGGTBP53611 331 aa13.67□□□□□ -0.22
SF3B3-206ENST00000565990 SMAD3P84022 425 aaKnown RBP13.67□□□□□ -0.22
SF3B3-206ENST00000565990 PPP2R3AQ06190 1150 aa13.67□□□□□ -0.22
SF3B3-206ENST00000565990 GRIK3Q13003 919 aa13.67□□□□□ -0.22
SF3B3-206ENST00000565990 C1orf220Q5T0J3 134 aa13.67□□□□□ -0.22
SF3B3-206ENST00000565990 CEP135Q66GS9 1140 aa13.67□□□□□ -0.22
SF3B3-206ENST00000565990 FAM117BQ6P1L5 589 aa13.67□□□□□ -0.22
SF3B3-206ENST00000565990 ZNF280BQ86YH2 543 aa13.67□□□□□ -0.22
SF3B3-206ENST00000565990 COLGALT2Q8IYK4 626 aa13.67□□□□□ -0.22
SF3B3-206ENST00000565990 FAM186BQ8IYM0 893 aa13.67□□□□□ -0.22
SF3B3-206ENST00000565990 URGCPQ8TCY9 931 aa13.67□□□□□ -0.22
SF3B3-206ENST00000565990 ZNF516Q92618 1163 aa13.67□□□□□ -0.22
SF3B3-206ENST00000565990 YME1L1Q96TA2 773 aa13.67□□□□□ -0.22
SF3B3-206ENST00000565990 HSD3B7Q9H2F3 369 aa13.67□□□□□ -0.22
SF3B3-206ENST00000565990 NRDE2Q9H7Z3 1164 aa13.67□□□□□ -0.22
SF3B3-206ENST00000565990 METTL14Q9HCE5 456 aaKnown RBP13.67□□□□□ -0.22
SF3B3-206ENST00000565990 PDE11AQ9HCR9 933 aa13.67□□□□□ -0.22
SF3B3-206ENST00000565990 NLRC5Q86WI3 1866 aa13.67□□□□□ -0.22
SF3B3-206ENST00000565990 KIF2AO00139 706 aaPredicted RBP13.66□□□□□ -0.22
SF3B3-206ENST00000565990 AP5Z1O43299 807 aa13.66□□□□□ -0.22
SF3B3-206ENST00000565990 LRPAP1P30533 357 aa13.66□□□□□ -0.22
SF3B3-206ENST00000565990 GSDMDP57764 484 aa13.66□□□□□ -0.22
SF3B3-206ENST00000565990 BFSP1Q12934 665 aa13.66□□□□□ -0.22
SF3B3-206ENST00000565990 TUSC3Q13454 348 aa13.66□□□□□ -0.22
SF3B3-206ENST00000565990 BTG3Q14201 252 aaPredicted RBP13.66□□□□□ -0.22
SF3B3-206ENST00000565990 CDKAL1Q5VV42 579 aa13.66□□□□□ -0.22
SF3B3-206ENST00000565990 WDR49Q8IV35 697 aa13.66□□□□□ -0.22
SF3B3-206ENST00000565990 DHX40Q8IX18 779 aaKnown RBP13.66□□□□□ -0.22
SF3B3-206ENST00000565990 EFCAB13Q8IY85 973 aa13.66□□□□□ -0.22
SF3B3-206ENST00000565990 FIBCD1Q8N539 461 aa13.66□□□□□ -0.22
SF3B3-206ENST00000565990 CXorf38Q8TB03 319 aa13.66□□□□□ -0.22
SF3B3-206ENST00000565990 CACTINQ8WUQ7 758 aaKnown RBP13.66□□□□□ -0.22
SF3B3-206ENST00000565990 POP1Q99575 1024 aaKnown RBP13.66□□□□□ -0.22
SF3B3-206ENST00000565990 TMEM175Q9BSA9 504 aa13.66□□□□□ -0.22
SF3B3-206ENST00000565990 PBX4Q9BYU1 374 aa13.66□□□□□ -0.22
SF3B3-206ENST00000565990 TRIM5Q9C035 493 aa13.66□□□□□ -0.22
SF3B3-206ENST00000565990 SLC38A7Q9NVC3 462 aa13.66□□□□□ -0.22
SF3B3-206ENST00000565990 INTS13Q9NVM9 706 aa13.66□□□□□ -0.22
SF3B3-206ENST00000565990 IMPACTQ9P2X3 320 aa13.66□□□□□ -0.22
SF3B3-206ENST00000565990 UBQLN1Q9UMX0 589 aaKnown RBP13.66□□□□□ -0.22
SF3B3-206ENST00000565990 CHD9Q3L8U1 2897 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms