RNA–Protein interactions for RNA: ENST00000565922.1

CMTM3-211, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene CMTM3, Length 615 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-211ENST00000565922 GJD3Q8N144 294 aa21.67■■□□□ 1.06
CMTM3-211ENST00000565922 DHX58Q96C10 678 aa21.67■■□□□ 1.06
CMTM3-211ENST00000565922 TSPAN18Q96SJ8 248 aa21.67■■□□□ 1.06
CMTM3-211ENST00000565922 GPR62Q9BZJ7 368 aa21.67■■□□□ 1.06
CMTM3-211ENST00000565922 CXCL16Q9H2A7 254 aa21.67■■□□□ 1.06
CMTM3-211ENST00000565922 RXFP1Q9HBX9 757 aa21.67■■□□□ 1.06
CMTM3-211ENST00000565922 PCDHA7Q9UN72 937 aa21.67■■□□□ 1.06
CMTM3-211ENST00000565922 SPDYE4A6NLX3 237 aa21.66■■□□□ 1.06
CMTM3-211ENST00000565922 B3GAT3O94766 335 aa21.66■■□□□ 1.06
CMTM3-211ENST00000565922 C1RP00736 705 aa21.66■■□□□ 1.06
CMTM3-211ENST00000565922 PPP2R3AQ06190 1150 aa21.66■■□□□ 1.06
CMTM3-211ENST00000565922 SYCE2Q6PIF2 218 aa21.66■■□□□ 1.06
CMTM3-211ENST00000565922 STXBP4Q6ZWJ1 553 aa21.66■■□□□ 1.06
CMTM3-211ENST00000565922 TAS1R1Q7RTX1 841 aa21.66■■□□□ 1.06
CMTM3-211ENST00000565922 HASPINQ8TF76 798 aa21.66■■□□□ 1.06
CMTM3-211ENST00000565922 SLC22A17Q8WUG5 538 aa21.66■■□□□ 1.06
CMTM3-211ENST00000565922 RABGGTAQ92696 567 aa21.66■■□□□ 1.06
CMTM3-211ENST00000565922 MSTO1Q9BUK6 570 aa21.66■■□□□ 1.06
CMTM3-211ENST00000565922 PANK4Q9NVE7 773 aa21.66■■□□□ 1.06
CMTM3-211ENST00000565922 KBTBD4Q9NVX7 518 aa21.66■■□□□ 1.06
CMTM3-211ENST00000565922 FNIP2Q9P278 1114 aa21.66■■□□□ 1.06
CMTM3-211ENST00000565922 CACNG4Q9UBN1 327 aa21.66■■□□□ 1.06
CMTM3-211ENST00000565922 PCDHB13Q9Y5F0 798 aa21.66■■□□□ 1.06
CMTM3-211ENST00000565922 XPOTO43592 962 aaKnown RBP21.65■■□□□ 1.06
CMTM3-211ENST00000565922 PPP1R37O75864 691 aa21.65■■□□□ 1.06
CMTM3-211ENST00000565922 GCNT3O95395 438 aa21.65■■□□□ 1.06
CMTM3-211ENST00000565922 EPCAMP16422 314 aa21.65■■□□□ 1.06
CMTM3-211ENST00000565922 RPL9P32969 192 aaKnown RBP21.65■■□□□ 1.06
CMTM3-211ENST00000565922 CLCN4P51793 760 aa21.65■■□□□ 1.06
CMTM3-211ENST00000565922 CLCNKBP51801 687 aa21.65■■□□□ 1.06
CMTM3-211ENST00000565922 UPP1Q16831 310 aa21.65■■□□□ 1.06
CMTM3-211ENST00000565922 SLC10A6Q3KNW5 377 aa21.65■■□□□ 1.06
CMTM3-211ENST00000565922 ZC2HC1CQ53FD0 456 aaPredicted RBP21.65■■□□□ 1.06
CMTM3-211ENST00000565922 FAM171A1Q5VUB5 890 aa21.65■■□□□ 1.06
CMTM3-211ENST00000565922 RESP18Q5W5W9 173 aa21.65■■□□□ 1.06
CMTM3-211ENST00000565922 RIN2Q8WYP3 895 aaPredicted RBP21.65■■□□□ 1.06
CMTM3-211ENST00000565922 SUSD6Q92537 303 aa21.65■■□□□ 1.06
CMTM3-211ENST00000565922 NECTIN4Q96NY8 510 aa21.65■■□□□ 1.06
CMTM3-211ENST00000565922 TTPALQ9BTX7 342 aa21.65■■□□□ 1.06
CMTM3-211ENST00000565922 S1PR5Q9H228 398 aa21.65■■□□□ 1.06
CMTM3-211ENST00000565922 SFXN1Q9H9B4 322 aa21.65■■□□□ 1.06
CMTM3-211ENST00000565922 RPF1Q9H9Y2 349 aaKnown RBP21.65■■□□□ 1.06
CMTM3-211ENST00000565922 A0A0B4J269 797 aa21.64■■□□□ 1.05
CMTM3-211ENST00000565922 TEX28O15482 410 aa21.64■■□□□ 1.05
CMTM3-211ENST00000565922 POLR2DO15514 142 aaKnown RBP21.64■■□□□ 1.05
CMTM3-211ENST00000565922 GLUD1P00367 558 aa21.64■■□□□ 1.05
CMTM3-211ENST00000565922 CXCL8P10145 99 aa21.64■■□□□ 1.05
CMTM3-211ENST00000565922 CBX2Q14781 532 aaPredicted RBP21.64■■□□□ 1.05
CMTM3-211ENST00000565922 POSTNQ15063 836 aa21.64■■□□□ 1.05
CMTM3-211ENST00000565922 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.64■■□□□ 1.05
CMTM3-211ENST00000565922 CD302Q8IX05 232 aa21.64■■□□□ 1.05
CMTM3-211ENST00000565922 SPATA32Q96LK8 384 aa21.64■■□□□ 1.05
CMTM3-211ENST00000565922 FBXL18Q96ME1 805 aa21.64■■□□□ 1.05
CMTM3-211ENST00000565922 RIPOR3Q96MK2 946 aa21.64■■□□□ 1.05
CMTM3-211ENST00000565922 ZMAT2Q96NC0 199 aaKnown RBP21.64■■□□□ 1.05
CMTM3-211ENST00000565922 ACCSQ96QU6 501 aa21.64■■□□□ 1.05
CMTM3-211ENST00000565922 PHF7Q9BWX1 381 aaPredicted RBP21.64■■□□□ 1.05
CMTM3-211ENST00000565922 TRIM9Q9C026 710 aa21.64■■□□□ 1.05
CMTM3-211ENST00000565922 HAPLN2Q9GZV7 340 aa21.64■■□□□ 1.05
CMTM3-211ENST00000565922 ADAM7Q9H2U9 754 aa21.64■■□□□ 1.05
CMTM3-211ENST00000565922 C2orf16Q68DN1 1984 aa21.63■■□□□ 1.05
CMTM3-211ENST00000565922 DENND4AQ7Z401 1863 aa21.63■■□□□ 1.05
CMTM3-211ENST00000565922 TTC26A0AVF1 554 aa21.63■■□□□ 1.05
CMTM3-211ENST00000565922 C19orf67A6NJJ6 358 aa21.63■■□□□ 1.05
CMTM3-211ENST00000565922 MTHFRP42898 656 aa21.63■■□□□ 1.05
CMTM3-211ENST00000565922 SEZ6Q53EL9 994 aa21.63■■□□□ 1.05
CMTM3-211ENST00000565922 L1TD1Q5T7N2 865 aaKnown RBP21.63■■□□□ 1.05
CMTM3-211ENST00000565922 ADALQ6DHV7 355 aa21.63■■□□□ 1.05
CMTM3-211ENST00000565922 CNNM4Q6P4Q7 775 aa21.63■■□□□ 1.05
CMTM3-211ENST00000565922 SLC39A4Q6P5W5 647 aa21.63■■□□□ 1.05
CMTM3-211ENST00000565922 CEP57Q86XR8 500 aa21.63■■□□□ 1.05
CMTM3-211ENST00000565922 PIK3R5Q8WYR1 880 aa21.63■■□□□ 1.05
CMTM3-211ENST00000565922 STRA6Q9BX79 667 aa21.63■■□□□ 1.05
CMTM3-211ENST00000565922 GOLGA2P5Q9HBQ8 144 aa21.63■■□□□ 1.05
CMTM3-211ENST00000565922 TBC1D7Q9P0N9 293 aa21.63■■□□□ 1.05
CMTM3-211ENST00000565922 UBQLN1Q9UMX0 589 aaKnown RBP21.63■■□□□ 1.05
CMTM3-211ENST00000565922 ZDHHC9Q9Y397 364 aa21.63■■□□□ 1.05
CMTM3-211ENST00000565922 STYXL1Q9Y6J8 313 aa21.63■■□□□ 1.05
CMTM3-211ENST00000565922 PODXLO00592 558 aa21.62■■□□□ 1.05
CMTM3-211ENST00000565922 ASIC1P78348 528 aa21.62■■□□□ 1.05
CMTM3-211ENST00000565922 POU5F1Q01860 360 aaKnown RBP21.62■■□□□ 1.05
CMTM3-211ENST00000565922 SOX4Q06945 474 aaPredicted RBP21.62■■□□□ 1.05
CMTM3-211ENST00000565922 PSMD5Q16401 504 aa21.62■■□□□ 1.05
CMTM3-211ENST00000565922 RTP2Q5QGT7 225 aa21.62■■□□□ 1.05
CMTM3-211ENST00000565922 CEP57L1Q8IYX8 460 aa21.62■■□□□ 1.05
CMTM3-211ENST00000565922 SYCP3Q8IZU3 236 aa21.62■■□□□ 1.05
CMTM3-211ENST00000565922 HDAC7Q8WUI4 952 aa21.62■■□□□ 1.05
CMTM3-211ENST00000565922 LEO1Q8WVC0 666 aaPredicted RBP21.62■■□□□ 1.05
CMTM3-211ENST00000565922 POMGNT1Q8WZA1 660 aa21.62■■□□□ 1.05
CMTM3-211ENST00000565922 STAMQ92783 540 aa21.62■■□□□ 1.05
CMTM3-211ENST00000565922 B3GALT6Q96L58 329 aa21.62■■□□□ 1.05
CMTM3-211ENST00000565922 SCAND2PQ9GZW5 306 aaPredicted RBP21.62■■□□□ 1.05
CMTM3-211ENST00000565922 TMEM206Q9H813 350 aa21.62■■□□□ 1.05
CMTM3-211ENST00000565922 NUB1Q9Y5A7 615 aa21.62■■□□□ 1.05
CMTM3-211ENST00000565922 MUC3AQ02505 3323 aa21.61■■□□□ 1.05
CMTM3-211ENST00000565922 FAM189A1O60320 539 aa21.61■■□□□ 1.05
CMTM3-211ENST00000565922 CYP3A5P20815 502 aa21.61■■□□□ 1.05
CMTM3-211ENST00000565922 TNFSF9P41273 254 aa21.61■■□□□ 1.05
CMTM3-211ENST00000565922 RARS2Q5T160 578 aaKnown RBP21.61■■□□□ 1.05
CMTM3-211ENST00000565922 KIF12Q96FN5 646 aa21.61■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms