RNA–Protein interactions for RNA: ENST00000565038.1

PALB2-203, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 344 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-203ENST00000565038 NARSO43776 548 aaKnown RBP5.53□□□□□ -1.52
PALB2-203ENST00000565038 ZNF202O95125 648 aa5.53□□□□□ -1.52
PALB2-203ENST00000565038 ITGB1P05556 798 aa5.53□□□□□ -1.52
PALB2-203ENST00000565038 PDCP20941 246 aa5.53□□□□□ -1.52
PALB2-203ENST00000565038 FXR1P51114 621 aaKnown RBP eCLIP5.53□□□□□ -1.52
PALB2-203ENST00000565038 DSC2Q02487 901 aa5.53□□□□□ -1.52
PALB2-203ENST00000565038 CREMQ03060 361 aa5.53□□□□□ -1.52
PALB2-203ENST00000565038 PLEKHG6Q3KR16 790 aa5.53□□□□□ -1.52
PALB2-203ENST00000565038 PDCD4Q53EL6 469 aaKnown RBP5.53□□□□□ -1.52
PALB2-203ENST00000565038 FAM102AQ5T9C2 384 aaPredicted RBP5.53□□□□□ -1.52
PALB2-203ENST00000565038 METRNLQ641Q3 311 aa5.53□□□□□ -1.52
PALB2-203ENST00000565038 GDF7Q7Z4P5 450 aa5.53□□□□□ -1.52
PALB2-203ENST00000565038 PLXDC1Q8IUK5 500 aa5.53□□□□□ -1.52
PALB2-203ENST00000565038 DRC7Q8IY82 874 aa5.53□□□□□ -1.52
PALB2-203ENST00000565038 DCBLD1Q8N8Z6 715 aa5.53□□□□□ -1.52
PALB2-203ENST00000565038 SLC25A43Q8WUT9 341 aaPredicted RBP5.53□□□□□ -1.52
PALB2-203ENST00000565038 MRGPRX4Q96LA9 322 aa5.53□□□□□ -1.52
PALB2-203ENST00000565038 DMRTA2Q96SC8 542 aa5.53□□□□□ -1.52
PALB2-203ENST00000565038 DCLRE1CQ96SD1 692 aaKnown RBP5.53□□□□□ -1.52
PALB2-203ENST00000565038 C11orf54Q9H0W9 315 aaPredicted RBP5.53□□□□□ -1.52
PALB2-203ENST00000565038 LRRC14BA6NHZ5 514 aa5.52□□□□□ -1.53
PALB2-203ENST00000565038 AKAP10O43572 662 aa5.52□□□□□ -1.53
PALB2-203ENST00000565038 SGTAO43765 313 aa5.52□□□□□ -1.53
PALB2-203ENST00000565038 NCR1O76036 304 aa5.52□□□□□ -1.53
PALB2-203ENST00000565038 ABLIM3O94929 683 aa5.52□□□□□ -1.53
PALB2-203ENST00000565038 PRSS23O95084 383 aa5.52□□□□□ -1.53
PALB2-203ENST00000565038 FSHBP01225 129 aa5.52□□□□□ -1.53
PALB2-203ENST00000565038 SBK3P0C264 359 aa5.52□□□□□ -1.53
PALB2-203ENST00000565038 CT47B1P0C2W7 299 aaPredicted RBP5.52□□□□□ -1.53
PALB2-203ENST00000565038 ZSCAN20P17040 1043 aaPredicted RBP5.52□□□□□ -1.53
PALB2-203ENST00000565038 ZFP36P26651 326 aaKnown RBP5.52□□□□□ -1.53
PALB2-203ENST00000565038 PIN1Q13526 163 aaPredicted RBP5.52□□□□□ -1.53
PALB2-203ENST00000565038 ODR4Q5SWX8 454 aa5.52□□□□□ -1.53
PALB2-203ENST00000565038 TSHZ3Q63HK5 1081 aa5.52□□□□□ -1.53
PALB2-203ENST00000565038 PPP4R3AQ6IN85 833 aa5.52□□□□□ -1.53
PALB2-203ENST00000565038 GADL1Q6ZQY3 521 aa5.52□□□□□ -1.53
PALB2-203ENST00000565038 VRK1Q99986 396 aaPredicted RBP5.52□□□□□ -1.53
PALB2-203ENST00000565038 RTFDC1Q9BY42 306 aaPredicted RBP5.52□□□□□ -1.53
PALB2-203ENST00000565038 RHOBTB2Q9BYZ6 727 aa5.52□□□□□ -1.53
PALB2-203ENST00000565038 GSTO2Q9H4Y5 243 aa5.52□□□□□ -1.53
PALB2-203ENST00000565038 NRDE2Q9H7Z3 1164 aa5.52□□□□□ -1.53
PALB2-203ENST00000565038 MMRN2Q9H8L6 949 aa5.52□□□□□ -1.53
PALB2-203ENST00000565038 GPRC5BQ9NZH0 403 aa5.52□□□□□ -1.53
PALB2-203ENST00000565038 ZNF180Q9UJW8 692 aa5.52□□□□□ -1.53
PALB2-203ENST00000565038 ANKRD6Q9Y2G4 727 aa5.52□□□□□ -1.53
PALB2-203ENST00000565038 THRAP3Q9Y2W1 955 aaKnown RBP5.52□□□□□ -1.53
PALB2-203ENST00000565038 CHST2Q9Y4C5 530 aa5.52□□□□□ -1.53
PALB2-203ENST00000565038 CFAP20Q9Y6A4 193 aaKnown RBP5.52□□□□□ -1.53
PALB2-203ENST00000565038 GRM6O15303 877 aa5.51□□□□□ -1.53
PALB2-203ENST00000565038 POU2F2P09086 479 aa5.51□□□□□ -1.53
PALB2-203ENST00000565038 RAB39AQ14964 217 aa5.51□□□□□ -1.53
PALB2-203ENST00000565038 KHDC1Q4VXA5 237 aaKnown RBP5.51□□□□□ -1.53
PALB2-203ENST00000565038 USP45Q70EL2 814 aa5.51□□□□□ -1.53
PALB2-203ENST00000565038 TTC7BQ86TV6 843 aa5.51□□□□□ -1.53
PALB2-203ENST00000565038 ANKRD13AQ8IZ07 590 aa5.51□□□□□ -1.53
PALB2-203ENST00000565038 OR56A1Q8NGH5 318 aa5.51□□□□□ -1.53
PALB2-203ENST00000565038 NSUN6Q8TEA1 469 aaKnown RBP5.51□□□□□ -1.53
PALB2-203ENST00000565038 ZNF483Q8TF39 744 aaPredicted RBP5.51□□□□□ -1.53
PALB2-203ENST00000565038 JPH3Q8WXH2 748 aaPredicted RBP5.51□□□□□ -1.53
PALB2-203ENST00000565038 CLIP3Q96DZ5 547 aa5.51□□□□□ -1.53
PALB2-203ENST00000565038 SLC46A2Q9BY10 475 aa5.51□□□□□ -1.53
PALB2-203ENST00000565038 GTPBP4Q9BZE4 634 aaKnown RBP5.51□□□□□ -1.53
PALB2-203ENST00000565038 TCF7L1Q9HCS4 588 aa5.51□□□□□ -1.53
PALB2-203ENST00000565038 CDHR4A6H8M9 788 aa5.5□□□□□ -1.53
PALB2-203ENST00000565038 FZD7O75084 574 aa5.5□□□□□ -1.53
PALB2-203ENST00000565038 PEX11BO96011 259 aa5.5□□□□□ -1.53
PALB2-203ENST00000565038 RPLP2P05387 115 aaKnown RBP5.5□□□□□ -1.53
PALB2-203ENST00000565038 CD1AP06126 327 aa5.5□□□□□ -1.53
PALB2-203ENST00000565038 ALAS1P13196 640 aa5.5□□□□□ -1.53
PALB2-203ENST00000565038 SLC6A4P31645 630 aa5.5□□□□□ -1.53
PALB2-203ENST00000565038 EPHB1P54762 984 aa5.5□□□□□ -1.53
PALB2-203ENST00000565038 TLE1Q04724 770 aa5.5□□□□□ -1.53
PALB2-203ENST00000565038 DACT2Q5SW24 774 aa5.5□□□□□ -1.53
PALB2-203ENST00000565038 AGAP9Q5VTM2 703 aa5.5□□□□□ -1.53
PALB2-203ENST00000565038 ZFPM1Q8IX07 1006 aa5.5□□□□□ -1.53
PALB2-203ENST00000565038 ZSWIM1Q9BR11 485 aa5.5□□□□□ -1.53
PALB2-203ENST00000565038 SCAND2PQ9GZW5 306 aaPredicted RBP5.5□□□□□ -1.53
PALB2-203ENST00000565038 AKIP1Q9NQ31 210 aa5.5□□□□□ -1.53
PALB2-203ENST00000565038 ZIM2Q9NZV7 527 aa5.5□□□□□ -1.53
PALB2-203ENST00000565038 ATP11BQ9Y2G3 1177 aa5.5□□□□□ -1.53
PALB2-203ENST00000565038 MAP3K2Q9Y2U5 619 aa5.5□□□□□ -1.53
PALB2-203ENST00000565038 CCDC78A2IDD5 438 aa5.49□□□□□ -1.53
PALB2-203ENST00000565038 DIRC3C9JPN6 131 aa5.49□□□□□ -1.53
PALB2-203ENST00000565038 RNASET2O00584 256 aaKnown RBP5.49□□□□□ -1.53
PALB2-203ENST00000565038 LPXNO60711 386 aa5.49□□□□□ -1.53
PALB2-203ENST00000565038 DTNBO60941 627 aa5.49□□□□□ -1.53
PALB2-203ENST00000565038 NDUFA10O95299 355 aa5.49□□□□□ -1.53
PALB2-203ENST00000565038 S100BP04271 92 aaPredicted RBP5.49□□□□□ -1.53
PALB2-203ENST00000565038 SPATA31D3P0C874 917 aa5.49□□□□□ -1.53
PALB2-203ENST00000565038 MALP21145 153 aa5.49□□□□□ -1.53
PALB2-203ENST00000565038 NOMO3P69849 1222 aa5.49□□□□□ -1.53
PALB2-203ENST00000565038 SNAPC2Q13487 334 aa5.49□□□□□ -1.53
PALB2-203ENST00000565038 ATP2B3Q16720 1220 aa5.49□□□□□ -1.53
PALB2-203ENST00000565038 NOMO2Q5JPE7 1267 aa5.49□□□□□ -1.53
PALB2-203ENST00000565038 SPATA31D4Q6ZUB0 917 aa5.49□□□□□ -1.53
PALB2-203ENST00000565038 TPH2Q8IWU9 490 aa5.49□□□□□ -1.53
PALB2-203ENST00000565038 RHOT2Q8IXI1 618 aa5.49□□□□□ -1.53
PALB2-203ENST00000565038 SYNE4Q8N205 404 aa5.49□□□□□ -1.53
PALB2-203ENST00000565038 PRR18Q8N4B5 295 aa5.49□□□□□ -1.53
PALB2-203ENST00000565038 TBC1D15Q8TC07 691 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms