RNA–Protein interactions for RNA: ENST00000564791.5

SNX29-204, Transcript of sorting nexin 29, humanhuman

TSL 1 (best)

Gene SNX29, Length 1,633 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-204ENST00000564791 CTU1Q7Z7A3 348 aaKnown RBP12.15□□□□□ -0.47
SNX29-204ENST00000564791 ACRBPQ8NEB7 543 aa12.15□□□□□ -0.47
SNX29-204ENST00000564791 KAT5Q92993 513 aa12.15□□□□□ -0.47
SNX29-204ENST00000564791 NT5C1BQ96P26 610 aa12.15□□□□□ -0.47
SNX29-204ENST00000564791 PI4K2AQ9BTU6 479 aa12.15□□□□□ -0.47
SNX29-204ENST00000564791 CCDC94Q9BW85 323 aaPredicted RBP12.15□□□□□ -0.47
SNX29-204ENST00000564791 NHEJ1Q9H9Q4 299 aaPredicted RBP12.15□□□□□ -0.47
SNX29-204ENST00000564791 UBE2TQ9NPD8 197 aaPredicted RBP12.15□□□□□ -0.47
SNX29-204ENST00000564791 PPP2R2CQ9Y2T4 447 aa12.15□□□□□ -0.47
SNX29-204ENST00000564791 ARVCFO00192 962 aa12.14□□□□□ -0.47
SNX29-204ENST00000564791 PHACTR2O75167 634 aa12.14□□□□□ -0.47
SNX29-204ENST00000564791 RPS6KA5O75582 802 aa12.14□□□□□ -0.47
SNX29-204ENST00000564791 NDUFA10O95299 355 aa12.14□□□□□ -0.47
SNX29-204ENST00000564791 TNNC2P02585 160 aa12.14□□□□□ -0.47
SNX29-204ENST00000564791 SERPING1P05155 500 aa12.14□□□□□ -0.47
SNX29-204ENST00000564791 NFICP08651 508 aa12.14□□□□□ -0.47
SNX29-204ENST00000564791 TMEM191BP0C7N4 346 aa12.14□□□□□ -0.47
SNX29-204ENST00000564791 SOX5P35711 763 aa12.14□□□□□ -0.47
SNX29-204ENST00000564791 EIF4A3P38919 411 aaKnown RBP12.14□□□□□ -0.47
SNX29-204ENST00000564791 STAT1P42224 750 aa12.14□□□□□ -0.47
SNX29-204ENST00000564791 DUOXA2Q1HG44 320 aa12.14□□□□□ -0.47
SNX29-204ENST00000564791 TDRD12Q587J7 1177 aaKnown RBP12.14□□□□□ -0.47
SNX29-204ENST00000564791 SCARA3Q6AZY7 606 aa12.14□□□□□ -0.47
SNX29-204ENST00000564791 JADE1Q6IE81 842 aa12.14□□□□□ -0.47
SNX29-204ENST00000564791 TRAPPC11Q7Z392 1133 aa12.14□□□□□ -0.47
SNX29-204ENST00000564791 PPM1KQ8N3J5 372 aa12.14□□□□□ -0.47
SNX29-204ENST00000564791 HELQQ8TDG4 1101 aa12.14□□□□□ -0.47
SNX29-204ENST00000564791 TATDN2Q93075 761 aa12.14□□□□□ -0.47
SNX29-204ENST00000564791 PPP1R13BQ96KQ4 1090 aa12.14□□□□□ -0.47
SNX29-204ENST00000564791 KREMEN1Q96MU8 473 aa12.14□□□□□ -0.47
SNX29-204ENST00000564791 ACAP3Q96P50 834 aa12.14□□□□□ -0.47
SNX29-204ENST00000564791 OSBPL7Q9BZF2 842 aa12.14□□□□□ -0.47
SNX29-204ENST00000564791 NXF3Q9H4D5 531 aaKnown RBP12.14□□□□□ -0.47
SNX29-204ENST00000564791 SNTG2Q9NY99 539 aa12.14□□□□□ -0.47
SNX29-204ENST00000564791 OGDHLQ9ULD0 1010 aa12.14□□□□□ -0.47
SNX29-204ENST00000564791 ST3GAL5Q9UNP4 418 aa12.14□□□□□ -0.47
SNX29-204ENST00000564791 HES2Q9Y543 173 aa12.14□□□□□ -0.47
SNX29-204ENST00000564791 ADGRG1Q9Y653 693 aa12.14□□□□□ -0.47
SNX29-204ENST00000564791 BRCA2P51587 3418 aa12.13□□□□□ -0.47
SNX29-204ENST00000564791 ZC3H11AO75152 810 aaKnown RBP eCLIP12.13□□□□□ -0.47
SNX29-204ENST00000564791 GFPT2O94808 682 aa12.13□□□□□ -0.47
SNX29-204ENST00000564791 CYLC1P35663 651 aaPredicted RBP12.13□□□□□ -0.47
SNX29-204ENST00000564791 KLHL30Q0D2K2 578 aa12.13□□□□□ -0.47
SNX29-204ENST00000564791 NCOA4Q13772 614 aa12.13□□□□□ -0.47
SNX29-204ENST00000564791 FAM26DQ5JW98 314 aa12.13□□□□□ -0.47
SNX29-204ENST00000564791 FBXO47Q5MNV8 452 aa12.13□□□□□ -0.47
SNX29-204ENST00000564791 SPOPLQ6IQ16 392 aa12.13□□□□□ -0.47
SNX29-204ENST00000564791 IRF2BP2Q7Z5L9 587 aa12.13□□□□□ -0.47
SNX29-204ENST00000564791 CCDC170Q8IYT3 715 aa12.13□□□□□ -0.47
SNX29-204ENST00000564791 ANKRD36BP1Q96IX9 119 aa12.13□□□□□ -0.47
SNX29-204ENST00000564791 CCDC42Q96M95 316 aa12.13□□□□□ -0.47
SNX29-204ENST00000564791 TRIM6Q9C030 488 aaPredicted RBP12.13□□□□□ -0.47
SNX29-204ENST00000564791 ASB7Q9H672 318 aa12.13□□□□□ -0.47
SNX29-204ENST00000564791 C1orf112Q9NSG2 853 aa12.13□□□□□ -0.47
SNX29-204ENST00000564791 EPN1Q9Y6I3 576 aaPredicted RBP12.13□□□□□ -0.47
SNX29-204ENST00000564791 FOXN3O00409 490 aaPredicted RBP12.12□□□□□ -0.47
SNX29-204ENST00000564791 CCP110O43303 1012 aa12.12□□□□□ -0.47
SNX29-204ENST00000564791 ZSCAN12O43309 604 aa12.12□□□□□ -0.47
SNX29-204ENST00000564791 CAND2O75155 1236 aa12.12□□□□□ -0.47
SNX29-204ENST00000564791 CCDC175P0C221 793 aa12.12□□□□□ -0.47
SNX29-204ENST00000564791 GHRP10912 638 aa12.12□□□□□ -0.47
SNX29-204ENST00000564791 FERP16591 822 aa12.12□□□□□ -0.47
SNX29-204ENST00000564791 CD52P31358 61 aa12.12□□□□□ -0.47
SNX29-204ENST00000564791 MFAP3P55082 362 aa12.12□□□□□ -0.47
SNX29-204ENST00000564791 NFX1Q12986 1120 aaKnown RBP12.12□□□□□ -0.47
SNX29-204ENST00000564791 MAPK8IP2Q13387 824 aaPredicted RBP12.12□□□□□ -0.47
SNX29-204ENST00000564791 LPIN1Q14693 890 aa12.12□□□□□ -0.47
SNX29-204ENST00000564791 WDR44Q5JSH3 913 aa12.12□□□□□ -0.47
SNX29-204ENST00000564791 ZNF618Q5T7W0 954 aa12.12□□□□□ -0.47
SNX29-204ENST00000564791 TWF2Q6IBS0 349 aaKnown RBP12.12□□□□□ -0.47
SNX29-204ENST00000564791 FBXO46Q6PJ61 603 aaPredicted RBP12.12□□□□□ -0.47
SNX29-204ENST00000564791 REXO1L1PQ8IX06 675 aa12.12□□□□□ -0.47
SNX29-204ENST00000564791 TMEM130Q8N3G9 435 aa12.12□□□□□ -0.47
SNX29-204ENST00000564791 ZNF333Q96JL9 665 aa12.12□□□□□ -0.47
SNX29-204ENST00000564791 SNX27Q96L92 541 aa12.12□□□□□ -0.47
SNX29-204ENST00000564791 APOL6Q9BWW8 343 aa12.12□□□□□ -0.47
SNX29-204ENST00000564791 CXCL16Q9H2A7 254 aa12.12□□□□□ -0.47
SNX29-204ENST00000564791 AGO3Q9H9G7 860 aaKnown RBP12.12□□□□□ -0.47
SNX29-204ENST00000564791 APOBEC3GQ9HC16 384 aaKnown RBP12.12□□□□□ -0.47
SNX29-204ENST00000564791 ERVK-5Q9HDB9 667 aa12.12□□□□□ -0.47
SNX29-204ENST00000564791 REXO2Q9Y3B8 237 aaKnown RBP12.12□□□□□ -0.47
SNX29-204ENST00000564791 UMODL1Q5DID0 1318 aa12.12□□□□□ -0.47
SNX29-204ENST00000564791 SSU72P8A0A1W2PR75 194 aa12.11□□□□□ -0.47
SNX29-204ENST00000564791 EIF3CLB5ME19 914 aaKnown RBP12.11□□□□□ -0.47
SNX29-204ENST00000564791 EVI5O60447 810 aa12.11□□□□□ -0.47
SNX29-204ENST00000564791 RECQL4O94761 1208 aa12.11□□□□□ -0.47
SNX29-204ENST00000564791 CLSTN1O94985 981 aa12.11□□□□□ -0.47
SNX29-204ENST00000564791 CST3P01034 146 aaPredicted RBP12.11□□□□□ -0.47
SNX29-204ENST00000564791 CKBP12277 381 aa12.11□□□□□ -0.47
SNX29-204ENST00000564791 PRKCIP41743 596 aa12.11□□□□□ -0.47
SNX29-204ENST00000564791 CDK7P50613 346 aa12.11□□□□□ -0.47
SNX29-204ENST00000564791 KIF11P52732 1056 aa12.11□□□□□ -0.47
SNX29-204ENST00000564791 LBX1P52954 281 aa12.11□□□□□ -0.47
SNX29-204ENST00000564791 YARSP54577 528 aaKnown RBP12.11□□□□□ -0.47
SNX29-204ENST00000564791 MYL6P60660 151 aa12.11□□□□□ -0.47
SNX29-204ENST00000564791 NOP14P78316 857 aaKnown RBP12.11□□□□□ -0.47
SNX29-204ENST00000564791 PAK2Q13177 524 aa12.11□□□□□ -0.47
SNX29-204ENST00000564791 TMEM132DQ14C87 1099 aa12.11□□□□□ -0.47
SNX29-204ENST00000564791 ASTE1Q2TB18 679 aaPredicted RBP12.11□□□□□ -0.47
SNX29-204ENST00000564791 TRAF7Q6Q0C0 670 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms