RNA–Protein interactions for RNA: ENST00000564703.1

RAB40C-208, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-208ENST00000564703 DCLRE1AQ6PJP8 1040 aa17.36■□□□□ 0.37
RAB40C-208ENST00000564703 DDX53Q86TM3 631 aaKnown RBP17.36■□□□□ 0.37
RAB40C-208ENST00000564703 XXYLT1Q8NBI6 393 aa17.36■□□□□ 0.37
RAB40C-208ENST00000564703 RDH13Q8NBN7 331 aa17.36■□□□□ 0.37
RAB40C-208ENST00000564703 PPM1EQ8WY54 764 aa17.36■□□□□ 0.37
RAB40C-208ENST00000564703 CXCL16Q9H2A7 254 aa17.36■□□□□ 0.37
RAB40C-208ENST00000564703 TLR9Q9NR96 1032 aa17.36■□□□□ 0.37
RAB40C-208ENST00000564703 UBQLN1Q9UMX0 589 aaKnown RBP17.36■□□□□ 0.37
RAB40C-208ENST00000564703 LAMA3Q16787 3333 aa17.35■□□□□ 0.37
RAB40C-208ENST00000564703 B3GAT3O94766 335 aa17.35■□□□□ 0.37
RAB40C-208ENST00000564703 CSPG5O95196 566 aa17.35■□□□□ 0.37
RAB40C-208ENST00000564703 RPL13P26373 211 aaKnown RBP17.35■□□□□ 0.37
RAB40C-208ENST00000564703 CA8P35219 290 aa17.35■□□□□ 0.37
RAB40C-208ENST00000564703 PPP1R2P41236 205 aa17.35■□□□□ 0.37
RAB40C-208ENST00000564703 SPAG1Q07617 926 aa17.35■□□□□ 0.37
RAB40C-208ENST00000564703 SURF1Q15526 300 aa17.35■□□□□ 0.37
RAB40C-208ENST00000564703 CCDC85BQ15834 202 aaPredicted RBP17.35■□□□□ 0.37
RAB40C-208ENST00000564703 CRELD2Q6UXH1 353 aaPredicted RBP17.35■□□□□ 0.37
RAB40C-208ENST00000564703 VPS52Q8N1B4 723 aa17.35■□□□□ 0.37
RAB40C-208ENST00000564703 BEST2Q8NFU1 509 aa17.35■□□□□ 0.37
RAB40C-208ENST00000564703 CACTINQ8WUQ7 758 aaKnown RBP17.35■□□□□ 0.37
RAB40C-208ENST00000564703 RABGGTAQ92696 567 aa17.35■□□□□ 0.37
RAB40C-208ENST00000564703 ZMAT2Q96NC0 199 aaKnown RBP17.35■□□□□ 0.37
RAB40C-208ENST00000564703 NGRNQ9NPE2 291 aaKnown RBP17.35■□□□□ 0.37
RAB40C-208ENST00000564703 ENTPD7Q9NQZ7 604 aa17.35■□□□□ 0.37
RAB40C-208ENST00000564703 RBAKQ9NYW8 714 aaPredicted RBP17.35■□□□□ 0.37
RAB40C-208ENST00000564703 KIAA1468Q9P260 1216 aa17.35■□□□□ 0.37
RAB40C-208ENST00000564703 ADAM28Q9UKQ2 775 aa17.35■□□□□ 0.37
RAB40C-208ENST00000564703 DERAQ9Y315 318 aa17.35■□□□□ 0.37
RAB40C-208ENST00000564703 TRAPPC3O43617 180 aa17.34■□□□□ 0.37
RAB40C-208ENST00000564703 B4GALT3O60512 393 aa17.34■□□□□ 0.37
RAB40C-208ENST00000564703 CXCL14O95715 111 aa17.34■□□□□ 0.37
RAB40C-208ENST00000564703 ADRB2P07550 413 aa17.34■□□□□ 0.37
RAB40C-208ENST00000564703 CYP3A5P20815 502 aa17.34■□□□□ 0.37
RAB40C-208ENST00000564703 TMEM132DQ14C87 1099 aa17.34■□□□□ 0.37
RAB40C-208ENST00000564703 TIGD5Q53EQ6 642 aa17.34■□□□□ 0.37
RAB40C-208ENST00000564703 KIAA1841Q6NSI8 718 aa17.34■□□□□ 0.37
RAB40C-208ENST00000564703 NT5DC4Q86YG4 428 aa17.34■□□□□ 0.37
RAB40C-208ENST00000564703 C12orf56Q8IXR9 622 aa17.34■□□□□ 0.37
RAB40C-208ENST00000564703 KIAA1671Q9BY89 1806 aa17.34■□□□□ 0.37
RAB40C-208ENST00000564703 NUP62CLQ9H1M0 184 aa17.34■□□□□ 0.37
RAB40C-208ENST00000564703 KCTD10Q9H3F6 313 aa17.34■□□□□ 0.37
RAB40C-208ENST00000564703 CLSTN2Q9H4D0 955 aa17.34■□□□□ 0.37
RAB40C-208ENST00000564703 MAN1B1Q9UKM7 699 aa17.34■□□□□ 0.37
RAB40C-208ENST00000564703 SSX2IPQ9Y2D8 614 aa17.34■□□□□ 0.37
RAB40C-208ENST00000564703 FRMD4BQ9Y2L6 1034 aa17.34■□□□□ 0.37
RAB40C-208ENST00000564703 R3HCC1Q9Y3T6 440 aaKnown RBP17.34■□□□□ 0.37
RAB40C-208ENST00000564703 BIN1O00499 593 aa17.33■□□□□ 0.36
RAB40C-208ENST00000564703 DNAJB1P25685 340 aa17.33■□□□□ 0.36
RAB40C-208ENST00000564703 PRCPP42785 496 aa17.33■□□□□ 0.36
RAB40C-208ENST00000564703 CLCNKBP51801 687 aa17.33■□□□□ 0.36
RAB40C-208ENST00000564703 ERVFC1P60507 584 aa17.33■□□□□ 0.36
RAB40C-208ENST00000564703 ELAVL2Q12926 359 aaKnown RBP17.33■□□□□ 0.36
RAB40C-208ENST00000564703 MYBPC2Q14324 1141 aa17.33■□□□□ 0.36
RAB40C-208ENST00000564703 SKIV2LQ15477 1246 aaKnown RBP17.33■□□□□ 0.36
RAB40C-208ENST00000564703 NAB2Q15742 525 aa17.33■□□□□ 0.36
RAB40C-208ENST00000564703 JADE1Q6IE81 842 aa17.33■□□□□ 0.36
RAB40C-208ENST00000564703 BRSK2Q8IWQ3 736 aa17.33■□□□□ 0.36
RAB40C-208ENST00000564703 SMYD4Q8IYR2 804 aaPredicted RBP17.33■□□□□ 0.36
RAB40C-208ENST00000564703 MAFAQ8NHW3 353 aaPredicted RBP17.33■□□□□ 0.36
RAB40C-208ENST00000564703 C18orf25Q96B23 403 aaPredicted RBP17.33■□□□□ 0.36
RAB40C-208ENST00000564703 FNBP1Q96RU3 617 aa17.33■□□□□ 0.36
RAB40C-208ENST00000564703 TSG101Q99816 390 aa17.33■□□□□ 0.36
RAB40C-208ENST00000564703 TCF25Q9BQ70 676 aa17.33■□□□□ 0.36
RAB40C-208ENST00000564703 NSUN3Q9H649 340 aaKnown RBP17.33■□□□□ 0.36
RAB40C-208ENST00000564703 TRAF3IP3Q9Y228 551 aa17.33■□□□□ 0.36
RAB40C-208ENST00000564703 C2CD2Q9Y426 696 aa17.33■□□□□ 0.36
RAB40C-208ENST00000564703 NUB1Q9Y5A7 615 aa17.33■□□□□ 0.36
RAB40C-208ENST00000564703 SF3B1O75533 1304 aaKnown RBP eCLIP17.32■□□□□ 0.361e-7■■■■■ 172.3
RAB40C-208ENST00000564703 PODXLO00592 558 aa17.32■□□□□ 0.36
RAB40C-208ENST00000564703 PSMA7O14818 248 aa17.32■□□□□ 0.36
RAB40C-208ENST00000564703 MBD3O95983 291 aa17.32■□□□□ 0.36
RAB40C-208ENST00000564703 NR3C1P04150 777 aa17.32■□□□□ 0.36
RAB40C-208ENST00000564703 TFAMQ00059 246 aaKnown RBP17.32■□□□□ 0.36
RAB40C-208ENST00000564703 SOX4Q06945 474 aaPredicted RBP17.32■□□□□ 0.36
RAB40C-208ENST00000564703 ADAM9Q13443 819 aa17.32■□□□□ 0.36
RAB40C-208ENST00000564703 SMC1AQ14683 1233 aaKnown RBP17.32■□□□□ 0.36
RAB40C-208ENST00000564703 ZBTB6Q15916 424 aa17.32■□□□□ 0.36
RAB40C-208ENST00000564703 SNRNP35Q16560 246 aaKnown RBP17.32■□□□□ 0.36
RAB40C-208ENST00000564703 UPP1Q16831 310 aa17.32■□□□□ 0.36
RAB40C-208ENST00000564703 COBLL1Q53SF7 1204 aa17.32■□□□□ 0.36
RAB40C-208ENST00000564703 TMEM173Q86WV6 379 aaPredicted RBP17.32■□□□□ 0.36
RAB40C-208ENST00000564703 CBWD2Q8IUF1 395 aa17.32■□□□□ 0.36
RAB40C-208ENST00000564703 SLC9A9Q8IVB4 645 aa17.32■□□□□ 0.36
RAB40C-208ENST00000564703 TRIML1Q8N9V2 468 aa17.32■□□□□ 0.36
RAB40C-208ENST00000564703 ZSWIM2Q8NEG5 633 aa17.32■□□□□ 0.36
RAB40C-208ENST00000564703 PAAF1Q9BRP4 392 aa17.32■□□□□ 0.36
RAB40C-208ENST00000564703 GOLGA2P5Q9HBQ8 144 aa17.32■□□□□ 0.36
RAB40C-208ENST00000564703 MRPL17Q9NRX2 175 aaKnown RBP17.32■□□□□ 0.36
RAB40C-208ENST00000564703 CACNG4Q9UBN1 327 aa17.32■□□□□ 0.36
RAB40C-208ENST00000564703 PRRC2BQ5JSZ5 2229 aaKnown RBP17.32■□□□□ 0.36
RAB40C-208ENST00000564703 MEFVO15553 781 aaPredicted RBP17.31■□□□□ 0.36
RAB40C-208ENST00000564703 NCK2O43639 380 aa17.31■□□□□ 0.36
RAB40C-208ENST00000564703 SOD2P04179 222 aa17.31■□□□□ 0.36
RAB40C-208ENST00000564703 MCM4P33991 863 aa17.31■□□□□ 0.36
RAB40C-208ENST00000564703 CAMK1Q14012 370 aa17.31■□□□□ 0.36
RAB40C-208ENST00000564703 USP41Q3LFD5 358 aa17.31■□□□□ 0.36
RAB40C-208ENST00000564703 SPATA1Q5VX52 437 aa17.31■□□□□ 0.36
RAB40C-208ENST00000564703 PLPP4Q5VZY2 271 aa17.31■□□□□ 0.36
RAB40C-208ENST00000564703 CEP135Q66GS9 1140 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms