RNA–Protein interactions for RNA: ENST00000564642.1

SYNGR3-204, Transcript of synaptogyrin 3, humanhuman

TSL 2

Gene SYNGR3, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-204ENST00000564642 CBX2Q14781 532 aaPredicted RBP20.02■□□□□ 0.8
SYNGR3-204ENST00000564642 UPP1Q16831 310 aa20.02■□□□□ 0.8
SYNGR3-204ENST00000564642 SLC10A6Q3KNW5 377 aa20.02■□□□□ 0.8
SYNGR3-204ENST00000564642 HERC4Q5GLZ8 1057 aaPredicted RBP20.02■□□□□ 0.8
SYNGR3-204ENST00000564642 RARS2Q5T160 578 aaKnown RBP20.02■□□□□ 0.8
SYNGR3-204ENST00000564642 FAM171A1Q5VUB5 890 aa20.02■□□□□ 0.8
SYNGR3-204ENST00000564642 ELMSAN1Q6PJG2 1045 aa20.02■□□□□ 0.8
SYNGR3-204ENST00000564642 MAP4K3Q8IVH8 894 aa20.02■□□□□ 0.8
SYNGR3-204ENST00000564642 SUSD6Q92537 303 aa20.02■□□□□ 0.8
SYNGR3-204ENST00000564642 FBXL18Q96ME1 805 aa20.02■□□□□ 0.8
SYNGR3-204ENST00000564642 ZMAT2Q96NC0 199 aaKnown RBP20.02■□□□□ 0.8
SYNGR3-204ENST00000564642 TTPALQ9BTX7 342 aa20.02■□□□□ 0.8
SYNGR3-204ENST00000564642 PHF7Q9BWX1 381 aaPredicted RBP20.02■□□□□ 0.8
SYNGR3-204ENST00000564642 HAPLN2Q9GZV7 340 aa20.02■□□□□ 0.8
SYNGR3-204ENST00000564642 ADAM7Q9H2U9 754 aa20.02■□□□□ 0.8
SYNGR3-204ENST00000564642 PLEKHA5Q9HAU0 1116 aa20.02■□□□□ 0.8
SYNGR3-204ENST00000564642 GOLGA2P5Q9HBQ8 144 aa20.02■□□□□ 0.8
SYNGR3-204ENST00000564642 PANK4Q9NVE7 773 aa20.02■□□□□ 0.8
SYNGR3-204ENST00000564642 TBC1D7Q9P0N9 293 aa20.02■□□□□ 0.8
SYNGR3-204ENST00000564642 DPP7Q9UHL4 492 aa20.02■□□□□ 0.8
SYNGR3-204ENST00000564642 PCDHA7Q9UN72 937 aa20.02■□□□□ 0.8
SYNGR3-204ENST00000564642 PDCD11Q14690 1871 aaKnown RBP20.01■□□□□ 0.79
SYNGR3-204ENST00000564642 TMEM189-UBE2V1I3L0A0 370 aa20.01■□□□□ 0.79
SYNGR3-204ENST00000564642 OGTO15294 1046 aa20.01■□□□□ 0.79
SYNGR3-204ENST00000564642 TRAPPC3O43617 180 aa20.01■□□□□ 0.79
SYNGR3-204ENST00000564642 CXCL8P10145 99 aa20.01■□□□□ 0.79
SYNGR3-204ENST00000564642 SOX4Q06945 474 aaPredicted RBP20.01■□□□□ 0.79
SYNGR3-204ENST00000564642 AXDND1Q5T1B0 1012 aaPredicted RBP20.01■□□□□ 0.79
SYNGR3-204ENST00000564642 SLFN12LQ6IEE8 588 aa20.01■□□□□ 0.79
SYNGR3-204ENST00000564642 CCDC65Q8IXS2 484 aa20.01■□□□□ 0.79
SYNGR3-204ENST00000564642 C12orf76Q8N812 135 aaPredicted RBP20.01■□□□□ 0.79
SYNGR3-204ENST00000564642 STAMQ92783 540 aa20.01■□□□□ 0.79
SYNGR3-204ENST00000564642 HVCN1Q96D96 273 aa20.01■□□□□ 0.79
SYNGR3-204ENST00000564642 MSTO1Q9BUK6 570 aa20.01■□□□□ 0.79
SYNGR3-204ENST00000564642 TNMDQ9H2S6 317 aa20.01■□□□□ 0.79
SYNGR3-204ENST00000564642 FNIP2Q9P278 1114 aa20.01■□□□□ 0.79
SYNGR3-204ENST00000564642 RCOR1Q9UKL0 485 aa20.01■□□□□ 0.79
SYNGR3-204ENST00000564642 A0A0B4J269 797 aa20■□□□□ 0.79
SYNGR3-204ENST00000564642 GCNT3O95395 438 aa20■□□□□ 0.79
SYNGR3-204ENST00000564642 GLUD1P00367 558 aa20■□□□□ 0.79
SYNGR3-204ENST00000564642 TNFSF9P41273 254 aa20■□□□□ 0.79
SYNGR3-204ENST00000564642 GLYCTKQ8IVS8 523 aa20■□□□□ 0.79
SYNGR3-204ENST00000564642 RIPOR3Q96MK2 946 aa20■□□□□ 0.79
SYNGR3-204ENST00000564642 SFXN1Q9H9B4 322 aa20■□□□□ 0.79
SYNGR3-204ENST00000564642 RPF1Q9H9Y2 349 aaKnown RBP20■□□□□ 0.79
SYNGR3-204ENST00000564642 EXOC7Q9UPT5 735 aa20■□□□□ 0.79
SYNGR3-204ENST00000564642 PCDHB13Q9Y5F0 798 aa20■□□□□ 0.79
SYNGR3-204ENST00000564642 ATP6V1DQ9Y5K8 247 aa20■□□□□ 0.79
SYNGR3-204ENST00000564642 PLXNA3P51805 1871 aa20■□□□□ 0.79
SYNGR3-204ENST00000564642 ANKRD63C9JTQ0 380 aa19.99■□□□□ 0.79
SYNGR3-204ENST00000564642 PODXLO00592 558 aa19.99■□□□□ 0.79
SYNGR3-204ENST00000564642 POLR2DO15514 142 aaKnown RBP19.99■□□□□ 0.79
SYNGR3-204ENST00000564642 RPL9P32969 192 aaKnown RBP19.99■□□□□ 0.79
SYNGR3-204ENST00000564642 MTHFRP42898 656 aa19.99■□□□□ 0.79
SYNGR3-204ENST00000564642 KRT85P78386 507 aa19.99■□□□□ 0.79
SYNGR3-204ENST00000564642 PPP2R3AQ06190 1150 aa19.99■□□□□ 0.79
SYNGR3-204ENST00000564642 E2F4Q16254 413 aa19.99■□□□□ 0.79
SYNGR3-204ENST00000564642 RTP2Q5QGT7 225 aa19.99■□□□□ 0.79
SYNGR3-204ENST00000564642 ATAT1Q5SQI0 421 aa19.99■□□□□ 0.79
SYNGR3-204ENST00000564642 ADALQ6DHV7 355 aa19.99■□□□□ 0.79
SYNGR3-204ENST00000564642 SLC39A4Q6P5W5 647 aa19.99■□□□□ 0.79
SYNGR3-204ENST00000564642 PDXDC1Q6P996 788 aa19.99■□□□□ 0.79
SYNGR3-204ENST00000564642 PRSS55Q6UWB4 352 aaPredicted RBP19.99■□□□□ 0.79
SYNGR3-204ENST00000564642 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.99■□□□□ 0.79
SYNGR3-204ENST00000564642 PALB2Q86YC2 1186 aa19.99■□□□□ 0.79
SYNGR3-204ENST00000564642 C18orf25Q96B23 403 aaPredicted RBP19.99■□□□□ 0.79
SYNGR3-204ENST00000564642 KIF12Q96FN5 646 aa19.99■□□□□ 0.79
SYNGR3-204ENST00000564642 RPGRIP1Q96KN7 1286 aa19.99■□□□□ 0.79
SYNGR3-204ENST00000564642 NECTIN4Q96NY8 510 aa19.99■□□□□ 0.79
SYNGR3-204ENST00000564642 ACCSQ96QU6 501 aa19.99■□□□□ 0.79
SYNGR3-204ENST00000564642 OLFML3Q9NRN5 406 aa19.99■□□□□ 0.79
SYNGR3-204ENST00000564642 KBTBD4Q9NVX7 518 aa19.99■□□□□ 0.79
SYNGR3-204ENST00000564642 MTCL1Q9Y4B5 1905 aaKnown RBP19.99■□□□□ 0.79
SYNGR3-204ENST00000564642 TTC26A0AVF1 554 aa19.98■□□□□ 0.79
SYNGR3-204ENST00000564642 FRMD3A2A2Y4 597 aa19.98■□□□□ 0.79
SYNGR3-204ENST00000564642 MEFVO15553 781 aaPredicted RBP19.98■□□□□ 0.79
SYNGR3-204ENST00000564642 RPL17P18621 184 aaKnown RBP19.98■□□□□ 0.79
SYNGR3-204ENST00000564642 ALCAMQ13740 583 aa19.98■□□□□ 0.79
SYNGR3-204ENST00000564642 POSTNQ15063 836 aa19.98■□□□□ 0.79
SYNGR3-204ENST00000564642 PSMD5Q16401 504 aa19.98■□□□□ 0.79
SYNGR3-204ENST00000564642 L1TD1Q5T7N2 865 aaKnown RBP19.98■□□□□ 0.79
SYNGR3-204ENST00000564642 RESP18Q5W5W9 173 aa19.98■□□□□ 0.79
SYNGR3-204ENST00000564642 KANK3Q6NY19 840 aa19.98■□□□□ 0.79
SYNGR3-204ENST00000564642 TMC5Q6UXY8 1006 aa19.98■□□□□ 0.79
SYNGR3-204ENST00000564642 PIK3R5Q8WYR1 880 aa19.98■□□□□ 0.79
SYNGR3-204ENST00000564642 KHSRPQ92945 711 aaKnown RBP eCLIP19.98■□□□□ 0.79
SYNGR3-204ENST00000564642 FAM212AQ96EL1 285 aa19.98■□□□□ 0.79
SYNGR3-204ENST00000564642 PYM1Q9BRP8 204 aaKnown RBP19.98■□□□□ 0.79
SYNGR3-204ENST00000564642 STRA6Q9BX79 667 aa19.98■□□□□ 0.79
SYNGR3-204ENST00000564642 EPHX3Q9H6B9 360 aa19.98■□□□□ 0.79
SYNGR3-204ENST00000564642 MAN1C1Q9NR34 630 aa19.98■□□□□ 0.79
SYNGR3-204ENST00000564642 ZDHHC9Q9Y397 364 aa19.98■□□□□ 0.79
SYNGR3-204ENST00000564642 NUB1Q9Y5A7 615 aa19.98■□□□□ 0.79
SYNGR3-204ENST00000564642 GTF3C5Q9Y5Q8 519 aaPredicted RBP19.98■□□□□ 0.79
SYNGR3-204ENST00000564642 BDP1A6H8Y1 2624 aa19.98■□□□□ 0.79
SYNGR3-204ENST00000564642 LACTBL1A8MY62 500 aa19.97■□□□□ 0.79
SYNGR3-204ENST00000564642 LOC730098B7Z3J9 87 aa19.97■□□□□ 0.79
SYNGR3-204ENST00000564642 XPOTO43592 962 aaKnown RBP19.97■□□□□ 0.79
SYNGR3-204ENST00000564642 PPP1R37O75864 691 aa19.97■□□□□ 0.79
SYNGR3-204ENST00000564642 C1RP00736 705 aa19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms