RNA–Protein interactions for RNA: ENST00000563842.5

CLK3-213, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 860 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-213ENST00000563842 MSTO1Q9BUK6 570 aa14.61□□□□□ -0.07
CLK3-213ENST00000563842 TRIM9Q9C026 710 aa14.61□□□□□ -0.07
CLK3-213ENST00000563842 CHST7Q9NS84 486 aa14.61□□□□□ -0.07
CLK3-213ENST00000563842 DZANK1Q9NVP4 752 aa14.61□□□□□ -0.07
CLK3-213ENST00000563842 CLEC1BQ9P126 229 aa14.61□□□□□ -0.07
CLK3-213ENST00000563842 KCNH3Q9ULD8 1083 aa14.61□□□□□ -0.07
CLK3-213ENST00000563842 BARX2Q9UMQ3 279 aaPredicted RBP14.61□□□□□ -0.07
CLK3-213ENST00000563842 HCFC2Q9Y5Z7 792 aa14.61□□□□□ -0.07
CLK3-213ENST00000563842 A0A0B4J269 797 aa14.6□□□□□ -0.07
CLK3-213ENST00000563842 LILRB3O75022 631 aa14.6□□□□□ -0.07
CLK3-213ENST00000563842 PPP1R37O75864 691 aa14.6□□□□□ -0.07
CLK3-213ENST00000563842 B3GAT3O94766 335 aa14.6□□□□□ -0.07
CLK3-213ENST00000563842 EFEMP2O95967 443 aa14.6□□□□□ -0.07
CLK3-213ENST00000563842 IL9P15248 144 aa14.6□□□□□ -0.07
CLK3-213ENST00000563842 CMA1P23946 247 aa14.6□□□□□ -0.07
CLK3-213ENST00000563842 RPL9P32969 192 aaKnown RBP14.6□□□□□ -0.07
CLK3-213ENST00000563842 PPP2R3AQ06190 1150 aa14.6□□□□□ -0.07
CLK3-213ENST00000563842 SMAD2Q15796 467 aaKnown RBP14.6□□□□□ -0.07
CLK3-213ENST00000563842 SLC10A6Q3KNW5 377 aa14.6□□□□□ -0.07
CLK3-213ENST00000563842 ZC2HC1CQ53FD0 456 aaPredicted RBP14.6□□□□□ -0.07
CLK3-213ENST00000563842 L1TD1Q5T7N2 865 aaKnown RBP14.6□□□□□ -0.07
CLK3-213ENST00000563842 KIAA0319Q5VV43 1072 aa14.6□□□□□ -0.07
CLK3-213ENST00000563842 CNNM4Q6P4Q7 775 aa14.6□□□□□ -0.07
CLK3-213ENST00000563842 KLHL5Q96PQ7 755 aa14.6□□□□□ -0.07
CLK3-213ENST00000563842 POP1Q99575 1024 aaKnown RBP14.6□□□□□ -0.07
CLK3-213ENST00000563842 C7orf25Q9BPX7 421 aa14.6□□□□□ -0.07
CLK3-213ENST00000563842 GPR62Q9BZJ7 368 aa14.6□□□□□ -0.07
CLK3-213ENST00000563842 TMEM206Q9H813 350 aa14.6□□□□□ -0.07
CLK3-213ENST00000563842 RPF1Q9H9Y2 349 aaKnown RBP14.6□□□□□ -0.07
CLK3-213ENST00000563842 USP25Q9UHP3 1055 aa14.6□□□□□ -0.07
CLK3-213ENST00000563842 RAPGEFL1Q9UHV5 662 aa14.6□□□□□ -0.07
CLK3-213ENST00000563842 XIRP2A4UGR9 3374 aa14.59□□□□□ -0.07
CLK3-213ENST00000563842 PLXNA3P51805 1871 aa14.59□□□□□ -0.07
CLK3-213ENST00000563842 C2CD2LO14523 706 aa14.59□□□□□ -0.07
CLK3-213ENST00000563842 KIF4AO95239 1232 aa14.59□□□□□ -0.07
CLK3-213ENST00000563842 C1RP00736 705 aa14.59□□□□□ -0.07
CLK3-213ENST00000563842 CNPP09543 421 aaKnown RBP14.59□□□□□ -0.07
CLK3-213ENST00000563842 ASIC1P78348 528 aa14.59□□□□□ -0.07
CLK3-213ENST00000563842 POU5F1Q01860 360 aaKnown RBP14.59□□□□□ -0.07
CLK3-213ENST00000563842 ITIH3Q06033 890 aa14.59□□□□□ -0.07
CLK3-213ENST00000563842 UPP1Q16831 310 aa14.59□□□□□ -0.07
CLK3-213ENST00000563842 CES5AQ6NT32 575 aa14.59□□□□□ -0.07
CLK3-213ENST00000563842 TAS1R1Q7RTX1 841 aa14.59□□□□□ -0.07
CLK3-213ENST00000563842 SYCP3Q8IZU3 236 aa14.59□□□□□ -0.07
CLK3-213ENST00000563842 VN1R2Q8NFZ6 395 aa14.59□□□□□ -0.07
CLK3-213ENST00000563842 RABGGTAQ92696 567 aa14.59□□□□□ -0.07
CLK3-213ENST00000563842 STAMQ92783 540 aa14.59□□□□□ -0.07
CLK3-213ENST00000563842 PAAF1Q9BRP4 392 aa14.59□□□□□ -0.07
CLK3-213ENST00000563842 TTPALQ9BTX7 342 aa14.59□□□□□ -0.07
CLK3-213ENST00000563842 STRA6Q9BX79 667 aa14.59□□□□□ -0.07
CLK3-213ENST00000563842 CXCL16Q9H2A7 254 aa14.59□□□□□ -0.07
CLK3-213ENST00000563842 RXFP1Q9HBX9 757 aa14.59□□□□□ -0.07
CLK3-213ENST00000563842 TBC1D7Q9P0N9 293 aa14.59□□□□□ -0.07
CLK3-213ENST00000563842 FNIP2Q9P278 1114 aa14.59□□□□□ -0.07
CLK3-213ENST00000563842 STYXL1Q9Y6J8 313 aa14.59□□□□□ -0.07
CLK3-213ENST00000563842 PIEZO1Q92508 2521 aa14.59□□□□□ -0.07
CLK3-213ENST00000563842 TTC26A0AVF1 554 aa14.58□□□□□ -0.08
CLK3-213ENST00000563842 SPDYE4A6NLX3 237 aa14.58□□□□□ -0.08
CLK3-213ENST00000563842 F8W810 466 aa14.58□□□□□ -0.08
CLK3-213ENST00000563842 LDHAP00338 332 aaKnown RBP14.58□□□□□ -0.08
CLK3-213ENST00000563842 CXCL8P10145 99 aa14.58□□□□□ -0.08
CLK3-213ENST00000563842 CYP3A5P20815 502 aa14.58□□□□□ -0.08
CLK3-213ENST00000563842 CLCNKBP51801 687 aa14.58□□□□□ -0.08
CLK3-213ENST00000563842 SEZ6Q53EL9 994 aa14.58□□□□□ -0.08
CLK3-213ENST00000563842 FAM171A1Q5VUB5 890 aa14.58□□□□□ -0.08
CLK3-213ENST00000563842 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.58□□□□□ -0.08
CLK3-213ENST00000563842 UNC13DQ70J99 1090 aa14.58□□□□□ -0.08
CLK3-213ENST00000563842 CEP57Q86XR8 500 aa14.58□□□□□ -0.08
CLK3-213ENST00000563842 HASPINQ8TF76 798 aa14.58□□□□□ -0.08
CLK3-213ENST00000563842 SLC22A17Q8WUG5 538 aa14.58□□□□□ -0.08
CLK3-213ENST00000563842 RIN2Q8WYP3 895 aaPredicted RBP14.58□□□□□ -0.08
CLK3-213ENST00000563842 POMGNT1Q8WZA1 660 aa14.58□□□□□ -0.08
CLK3-213ENST00000563842 ZMAT2Q96NC0 199 aaKnown RBP14.58□□□□□ -0.08
CLK3-213ENST00000563842 HAPLN2Q9GZV7 340 aa14.58□□□□□ -0.08
CLK3-213ENST00000563842 CACNG4Q9UBN1 327 aa14.58□□□□□ -0.08
CLK3-213ENST00000563842 AGO2Q9UKV8 859 aaKnown RBP14.58□□□□□ -0.08
CLK3-213ENST00000563842 UBQLN1Q9UMX0 589 aaKnown RBP14.58□□□□□ -0.08
CLK3-213ENST00000563842 PVALEFA0A1B0GWK0 134 aa14.57□□□□□ -0.08
CLK3-213ENST00000563842 ANKRD63C9JTQ0 380 aa14.57□□□□□ -0.08
CLK3-213ENST00000563842 PODXLO00592 558 aa14.57□□□□□ -0.08
CLK3-213ENST00000563842 KIAA0391O15091 583 aaKnown RBP14.57□□□□□ -0.08
CLK3-213ENST00000563842 ADRB2P07550 413 aa14.57□□□□□ -0.08
CLK3-213ENST00000563842 SLFN14P0C7P3 912 aa14.57□□□□□ -0.08
CLK3-213ENST00000563842 GARTP22102 1010 aa14.57□□□□□ -0.08
CLK3-213ENST00000563842 TNFSF9P41273 254 aa14.57□□□□□ -0.08
CLK3-213ENST00000563842 CLCN4P51793 760 aa14.57□□□□□ -0.08
CLK3-213ENST00000563842 RBM10P98175 930 aaKnown RBP14.57□□□□□ -0.08
CLK3-213ENST00000563842 SLC39A4Q6P5W5 647 aa14.57□□□□□ -0.08
CLK3-213ENST00000563842 ADHFE1Q8IWW8 467 aa14.57□□□□□ -0.08
CLK3-213ENST00000563842 HDAC7Q8WUI4 952 aa14.57□□□□□ -0.08
CLK3-213ENST00000563842 PIK3R5Q8WYR1 880 aa14.57□□□□□ -0.08
CLK3-213ENST00000563842 KIF12Q96FN5 646 aa14.57□□□□□ -0.08
CLK3-213ENST00000563842 CCDC34Q96HJ3 373 aa14.57□□□□□ -0.08
CLK3-213ENST00000563842 FBXL18Q96ME1 805 aa14.57□□□□□ -0.08
CLK3-213ENST00000563842 NECTIN4Q96NY8 510 aa14.57□□□□□ -0.08
CLK3-213ENST00000563842 ASB7Q9H672 318 aa14.57□□□□□ -0.08
CLK3-213ENST00000563842 GOLGA2P5Q9HBQ8 144 aa14.57□□□□□ -0.08
CLK3-213ENST00000563842 CPSF3Q9UKF6 684 aaKnown RBP14.57□□□□□ -0.08
CLK3-213ENST00000563842 USP15Q9Y4E8 981 aaPredicted RBP14.57□□□□□ -0.08
CLK3-213ENST00000563842 NUB1Q9Y5A7 615 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms