RNA–Protein interactions for RNA: ENST00000563829.5

SCAMP2-204, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 2

Gene SCAMP2, Length 3,162 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-204ENST00000563829 ECSITQ9BQ95 431 aa13.12□□□□□ -0.31
SCAMP2-204ENST00000563829 HSFX1Q9UBD0 423 aa13.12□□□□□ -0.31
SCAMP2-204ENST00000563829 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.12□□□□□ -0.31
SCAMP2-204ENST00000563829 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.12□□□□□ -0.31
SCAMP2-204ENST00000563829 CCDC160A6NGH7 325 aa13.12□□□□□ -0.31
SCAMP2-204ENST00000563829 ZBED4O75132 1171 aa13.12□□□□□ -0.31
SCAMP2-204ENST00000563829 GGPS1O95749 300 aa13.12□□□□□ -0.31
SCAMP2-204ENST00000563829 STARD3NLO95772 234 aa13.12□□□□□ -0.31
SCAMP2-204ENST00000563829 NR3C1P04150 777 aa13.12□□□□□ -0.31
SCAMP2-204ENST00000563829 TROVE2P10155 538 aaKnown RBP eCLIP13.12□□□□□ -0.31
SCAMP2-204ENST00000563829 MECOMQ03112 1051 aa13.12□□□□□ -0.31
SCAMP2-204ENST00000563829 LMNB2Q03252 620 aa13.12□□□□□ -0.31
SCAMP2-204ENST00000563829 KCNA1Q09470 495 aa13.12□□□□□ -0.31
SCAMP2-204ENST00000563829 SFSWAPQ12872 951 aaKnown RBP13.12□□□□□ -0.31
SCAMP2-204ENST00000563829 SIX1Q15475 284 aaPredicted RBP13.12□□□□□ -0.31
SCAMP2-204ENST00000563829 LVRNQ6Q4G3 990 aa13.12□□□□□ -0.31
SCAMP2-204ENST00000563829 TRABD2AQ86V40 505 aa13.12□□□□□ -0.31
SCAMP2-204ENST00000563829 CFAP61Q8NHU2 1237 aa13.12□□□□□ -0.31
SCAMP2-204ENST00000563829 CLMNQ96JQ2 1002 aa13.12□□□□□ -0.31
SCAMP2-204ENST00000563829 ANGPTL2Q9UKU9 493 aa13.12□□□□□ -0.31
SCAMP2-204ENST00000563829 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.12□□□□□ -0.31
SCAMP2-204ENST00000563829 C2orf71A6NGG8 1288 aa13.12□□□□□ -0.31
SCAMP2-204ENST00000563829 CYP1B1Q16678 543 aa13.12□□□□□ -0.31
SCAMP2-204ENST00000563829 SFR1Q86XK3 245 aa13.12□□□□□ -0.31
SCAMP2-204ENST00000563829 NME8Q8N427 588 aa13.12□□□□□ -0.31
SCAMP2-204ENST00000563829 SMC1BQ8NDV3 1235 aa13.12□□□□□ -0.31
SCAMP2-204ENST00000563829 STKLD1Q8NE28 680 aa13.12□□□□□ -0.31
SCAMP2-204ENST00000563829 MAML1Q92585 1016 aa13.12□□□□□ -0.31
SCAMP2-204ENST00000563829 YIPF2Q9BWQ6 316 aa13.12□□□□□ -0.31
SCAMP2-204ENST00000563829 STK33Q9BYT3 514 aa13.12□□□□□ -0.31
SCAMP2-204ENST00000563829 EBF3Q9H4W6 596 aa13.12□□□□□ -0.31
SCAMP2-204ENST00000563829 BCAS3Q9H6U6 928 aa13.12□□□□□ -0.31
SCAMP2-204ENST00000563829 DDX18Q9NVP1 670 aaKnown RBP13.12□□□□□ -0.31
SCAMP2-204ENST00000563829 SLAIN2Q9P270 581 aa13.12□□□□□ -0.31
SCAMP2-204ENST00000563829 ATP8B3O60423 1300 aa13.12□□□□□ -0.31
SCAMP2-204ENST00000563829 CICQ96RK0 1608 aaPredicted RBP13.11□□□□□ -0.31
SCAMP2-204ENST00000563829 HNRNPCL1O60812 293 aaKnown RBP13.11□□□□□ -0.31
SCAMP2-204ENST00000563829 HARSP12081 509 aaKnown RBP13.11□□□□□ -0.31
SCAMP2-204ENST00000563829 ANPEPP15144 967 aa13.11□□□□□ -0.31
SCAMP2-204ENST00000563829 MUTP22033 750 aa13.11□□□□□ -0.31
SCAMP2-204ENST00000563829 HOXD13P35453 343 aa13.11□□□□□ -0.31
SCAMP2-204ENST00000563829 STAT4Q14765 748 aa13.11□□□□□ -0.31
SCAMP2-204ENST00000563829 ISLR2Q6UXK2 745 aa13.11□□□□□ -0.31
SCAMP2-204ENST00000563829 PHLDB2Q86SQ0 1253 aa13.11□□□□□ -0.31
SCAMP2-204ENST00000563829 ZNF444Q8N0Y2 327 aaPredicted RBP13.11□□□□□ -0.31
SCAMP2-204ENST00000563829 SYT2Q8N9I0 419 aaPredicted RBP13.11□□□□□ -0.31
SCAMP2-204ENST00000563829 DENND1AQ8TEH3 1009 aa13.11□□□□□ -0.31
SCAMP2-204ENST00000563829 C12orf65Q9H3J6 166 aaKnown RBP13.11□□□□□ -0.31
SCAMP2-204ENST00000563829 KIAA1586Q9HCI6 787 aa13.11□□□□□ -0.31
SCAMP2-204ENST00000563829 DDX43Q9NXZ2 648 aaKnown RBP13.11□□□□□ -0.31
SCAMP2-204ENST00000563829 ARMCX1Q9P291 453 aa13.11□□□□□ -0.31
SCAMP2-204ENST00000563829 DDX25Q9UHL0 483 aaKnown RBP13.11□□□□□ -0.31
SCAMP2-204ENST00000563829 ACTL7BQ9Y614 415 aa13.11□□□□□ -0.31
SCAMP2-204ENST00000563829 KCPQ6ZWJ8 1503 aa13.11□□□□□ -0.31
SCAMP2-204ENST00000563829 DLEC1Q9Y238 1755 aa13.11□□□□□ -0.31
SCAMP2-204ENST00000563829 CALUO43852 315 aaPredicted RBP13.11□□□□□ -0.31
SCAMP2-204ENST00000563829 EDIL3O43854 480 aa13.11□□□□□ -0.31
SCAMP2-204ENST00000563829 HOXA7P31268 230 aaPredicted RBP13.11□□□□□ -0.31
SCAMP2-204ENST00000563829 SEPT7Q16181 437 aaKnown RBP13.11□□□□□ -0.31
SCAMP2-204ENST00000563829 MAPK6Q16659 721 aa13.11□□□□□ -0.31
SCAMP2-204ENST00000563829 UBE2SQ16763 222 aa13.11□□□□□ -0.31
SCAMP2-204ENST00000563829 CCDC62Q6P9F0 684 aa13.11□□□□□ -0.31
SCAMP2-204ENST00000563829 ZC3H3Q8IXZ2 948 aaKnown RBP13.11□□□□□ -0.31
SCAMP2-204ENST00000563829 SLC25A41Q8N5S1 370 aa13.11□□□□□ -0.31
SCAMP2-204ENST00000563829 PTCD3Q96EY7 689 aaKnown RBP13.11□□□□□ -0.31
SCAMP2-204ENST00000563829 NDE1Q9NXR1 346 aa13.11□□□□□ -0.31
SCAMP2-204ENST00000563829 MEIS1O00470 390 aa13.1□□□□□ -0.31
SCAMP2-204ENST00000563829 TCEA3O75764 348 aa13.1□□□□□ -0.31
SCAMP2-204ENST00000563829 ZNF189O75820 626 aaPredicted RBP13.1□□□□□ -0.31
SCAMP2-204ENST00000563829 PGM3O95394 542 aa13.1□□□□□ -0.31
SCAMP2-204ENST00000563829 GRIA2P42262 883 aa13.1□□□□□ -0.31
SCAMP2-204ENST00000563829 CDC16Q13042 620 aa13.1□□□□□ -0.31
SCAMP2-204ENST00000563829 MPP3Q13368 585 aa13.1□□□□□ -0.31
SCAMP2-204ENST00000563829 R3HDM1Q15032 1099 aaKnown RBP13.1□□□□□ -0.31
SCAMP2-204ENST00000563829 EAPPQ56P03 285 aaPredicted RBP13.1□□□□□ -0.31
SCAMP2-204ENST00000563829 ARSHQ5FYA8 562 aa13.1□□□□□ -0.31
SCAMP2-204ENST00000563829 C11orf63Q6NUN7 778 aa13.1□□□□□ -0.31
SCAMP2-204ENST00000563829 NSMFQ6X4W1 530 aa13.1□□□□□ -0.31
SCAMP2-204ENST00000563829 ANKRD23Q86SG2 305 aa13.1□□□□□ -0.31
SCAMP2-204ENST00000563829 TTC7BQ86TV6 843 aa13.1□□□□□ -0.31
SCAMP2-204ENST00000563829 NSUN4Q96CB9 384 aaKnown RBP13.1□□□□□ -0.31
SCAMP2-204ENST00000563829 HAUS1Q96CS2 278 aa13.1□□□□□ -0.31
SCAMP2-204ENST00000563829 CLPTM1LQ96KA5 538 aa13.1□□□□□ -0.31
SCAMP2-204ENST00000563829 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.1□□□□□ -0.314e-6■■■■■ 38.2
SCAMP2-204ENST00000563829 KANSL3Q9P2N6 904 aa13.1□□□□□ -0.31
SCAMP2-204ENST00000563829 ANKFY1Q9P2R3 1169 aa13.1□□□□□ -0.31
SCAMP2-204ENST00000563829 ALS2Q96Q42 1657 aa13.1□□□□□ -0.31
SCAMP2-204ENST00000563829 A0A1W2PPM1 405 aa13.1□□□□□ -0.31
SCAMP2-204ENST00000563829 FOXN3O00409 490 aaPredicted RBP13.1□□□□□ -0.31
SCAMP2-204ENST00000563829 SUPT3HO75486 399 aa13.1□□□□□ -0.31
SCAMP2-204ENST00000563829 ADAMTS2O95450 1211 aa13.1□□□□□ -0.31
SCAMP2-204ENST00000563829 OATP04181 439 aa13.1□□□□□ -0.31
SCAMP2-204ENST00000563829 RRM1P23921 792 aa13.1□□□□□ -0.31
SCAMP2-204ENST00000563829 IVDP26440 423 aa13.1□□□□□ -0.31
SCAMP2-204ENST00000563829 POTEGQ6S5H5 508 aa13.1□□□□□ -0.31
SCAMP2-204ENST00000563829 HAS1Q92839 578 aa13.1□□□□□ -0.31
SCAMP2-204ENST00000563829 TRAIPQ9BWF2 469 aa13.1□□□□□ -0.31
SCAMP2-204ENST00000563829 LRRC19Q9H756 370 aa13.1□□□□□ -0.31
SCAMP2-204ENST00000563829 TYW1Q9NV66 732 aaKnown RBP13.1□□□□□ -0.31
SCAMP2-204ENST00000563829 STK32BQ9NY57 414 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms