RNA–Protein interactions for RNA: ENST00000563410.1

CHD9-208, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 488 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-208ENST00000563410 XKR4Q5GH76 650 aa23.02■■□□□ 1.28
CHD9-208ENST00000563410 PPM1LQ5SGD2 360 aa23.02■■□□□ 1.28
CHD9-208ENST00000563410 LIN9Q5TKA1 542 aa23.02■■□□□ 1.28
CHD9-208ENST00000563410 RINT1Q6NUQ1 792 aa23.02■■□□□ 1.28
CHD9-208ENST00000563410 RSPO2Q6UXX9 243 aaPredicted RBP23.02■■□□□ 1.28
CHD9-208ENST00000563410 GPR152Q8TDT2 470 aa23.02■■□□□ 1.28
CHD9-208ENST00000563410 RUSC1Q9BVN2 902 aa23.02■■□□□ 1.28
CHD9-208ENST00000563410 TMEM134Q9H6X4 195 aa23.02■■□□□ 1.28
CHD9-208ENST00000563410 MTRRQ9UBK8 725 aa23.02■■□□□ 1.28
CHD9-208ENST00000563410 CA14Q9ULX7 337 aa23.02■■□□□ 1.28
CHD9-208ENST00000563410 NUMBLQ9Y6R0 609 aa23.02■■□□□ 1.28
CHD9-208ENST00000563410 CCL16O15467 120 aa23.01■■□□□ 1.27
CHD9-208ENST00000563410 KRT79Q5XKE5 535 aa23.01■■□□□ 1.27
CHD9-208ENST00000563410 C1orf186Q6ZWK4 172 aa23.01■■□□□ 1.27
CHD9-208ENST00000563410 APBB1IPQ7Z5R6 666 aaPredicted RBP23.01■■□□□ 1.27
CHD9-208ENST00000563410 DTWD2Q8NBA8 298 aa23.01■■□□□ 1.27
CHD9-208ENST00000563410 UROC1Q96N76 676 aa23.01■■□□□ 1.27
CHD9-208ENST00000563410 ZFP37Q9Y6Q3 630 aaPredicted RBP23.01■■□□□ 1.27
CHD9-208ENST00000563410 ABLIM1O14639 778 aa23■■□□□ 1.27
CHD9-208ENST00000563410 PROZP22891 400 aa23■■□□□ 1.27
CHD9-208ENST00000563410 TKTP29401 623 aaKnown RBP23■■□□□ 1.27
CHD9-208ENST00000563410 BRCC3P46736 316 aa23■■□□□ 1.27
CHD9-208ENST00000563410 ZNF568Q3ZCX4 644 aa23■■□□□ 1.27
CHD9-208ENST00000563410 AXDND1Q5T1B0 1012 aaPredicted RBP23■■□□□ 1.27
CHD9-208ENST00000563410 SLC7A14Q8TBB6 771 aa23■■□□□ 1.27
CHD9-208ENST00000563410 FGF14Q92915 247 aa23■■□□□ 1.27
CHD9-208ENST00000563410 DDX27Q96GQ7 796 aaKnown RBP23■■□□□ 1.27
CHD9-208ENST00000563410 RPP25Q9BUL9 199 aaKnown RBP23■■□□□ 1.27
CHD9-208ENST00000563410 CCDC94Q9BW85 323 aaPredicted RBP23■■□□□ 1.27
CHD9-208ENST00000563410 TARS2Q9BW92 718 aaKnown RBP23■■□□□ 1.27
CHD9-208ENST00000563410 CDH7Q9ULB5 785 aa23■■□□□ 1.27
CHD9-208ENST00000563410 CDY1Q9Y6F8 540 aa23■■□□□ 1.27
CHD9-208ENST00000563410 MIA3Q5JRA6 1907 aa23■■□□□ 1.27
CHD9-208ENST00000563410 CACNA1IQ9P0X4 2223 aa23■■□□□ 1.27
CHD9-208ENST00000563410 PRR23AA6NEV1 266 aa22.99■■□□□ 1.27
CHD9-208ENST00000563410 I3L4J1 428 aa22.99■■□□□ 1.27
CHD9-208ENST00000563410 POU2F2P09086 479 aa22.99■■□□□ 1.27
CHD9-208ENST00000563410 OSTNP61366 133 aa22.99■■□□□ 1.27
CHD9-208ENST00000563410 DMP1Q13316 513 aaPredicted RBP22.99■■□□□ 1.27
CHD9-208ENST00000563410 ANGPT1Q15389 498 aa22.99■■□□□ 1.27
CHD9-208ENST00000563410 UVSSAQ2YD98 709 aa22.99■■□□□ 1.27
CHD9-208ENST00000563410 PARM1Q6UWI2 310 aa22.99■■□□□ 1.27
CHD9-208ENST00000563410 DTHD1Q6ZMT9 781 aa22.99■■□□□ 1.27
CHD9-208ENST00000563410 FRMD5Q7Z6J6 570 aa22.99■■□□□ 1.27
CHD9-208ENST00000563410 DRC1Q96MC2 740 aa22.99■■□□□ 1.27
CHD9-208ENST00000563410 ZMAT2Q96NC0 199 aaKnown RBP22.99■■□□□ 1.27
CHD9-208ENST00000563410 MRPL4Q9BYD3 311 aaKnown RBP22.99■■□□□ 1.27
CHD9-208ENST00000563410 KMT5AQ9NQR1 393 aa22.99■■□□□ 1.27
CHD9-208ENST00000563410 SLC2A4RGQ9NR83 387 aa22.99■■□□□ 1.27
CHD9-208ENST00000563410 BACE2Q9Y5Z0 518 aa22.99■■□□□ 1.27
CHD9-208ENST00000563410 GVINP1Q7Z2Y8 2422 aa22.99■■□□□ 1.27
CHD9-208ENST00000563410 WDR87Q6ZQQ6 2873 aa22.98■■□□□ 1.27
CHD9-208ENST00000563410 MEFVO15553 781 aaPredicted RBP22.98■■□□□ 1.27
CHD9-208ENST00000563410 XYLBO75191 536 aa22.98■■□□□ 1.27
CHD9-208ENST00000563410 YARSP54577 528 aaKnown RBP22.98■■□□□ 1.27
CHD9-208ENST00000563410 ITFG1Q8TB96 612 aa22.98■■□□□ 1.27
CHD9-208ENST00000563410 FGF13Q92913 245 aa22.98■■□□□ 1.27
CHD9-208ENST00000563410 SNX27Q96L92 541 aa22.98■■□□□ 1.27
CHD9-208ENST00000563410 TBC1D17Q9HA65 648 aa22.98■■□□□ 1.27
CHD9-208ENST00000563410 C17orf75Q9HAS0 396 aa22.98■■□□□ 1.27
CHD9-208ENST00000563410 TOPORSQ9NS56 1045 aaPredicted RBP22.98■■□□□ 1.27
CHD9-208ENST00000563410 HCFC1R1Q9NWW0 138 aa22.98■■□□□ 1.27
CHD9-208ENST00000563410 POLIQ9UNA4 740 aa22.98■■□□□ 1.27
CHD9-208ENST00000563410 RBM19Q9Y4C8 960 aaKnown RBP22.98■■□□□ 1.27
CHD9-208ENST00000563410 FANCMQ8IYD8 2048 aa22.98■■□□□ 1.27
CHD9-208ENST00000563410 SFI1A8K8P3 1242 aa22.97■■□□□ 1.27
CHD9-208ENST00000563410 STK25O00506 426 aa22.97■■□□□ 1.27
CHD9-208ENST00000563410 SLC16A4O15374 487 aa22.97■■□□□ 1.27
CHD9-208ENST00000563410 TRAPPC3O43617 180 aa22.97■■□□□ 1.27
CHD9-208ENST00000563410 MCF2P10911 925 aa22.97■■□□□ 1.27
CHD9-208ENST00000563410 ATP2C1P98194 919 aaPredicted RBP22.97■■□□□ 1.27
CHD9-208ENST00000563410 HYIQ5T013 277 aa22.97■■□□□ 1.27
CHD9-208ENST00000563410 ANKS3Q6ZW76 656 aa22.97■■□□□ 1.27
CHD9-208ENST00000563410 ZBTB45Q96K62 511 aaPredicted RBP22.97■■□□□ 1.27
CHD9-208ENST00000563410 PNMA5Q96PV4 448 aa22.97■■□□□ 1.27
CHD9-208ENST00000563410 NTPCRQ9BSD7 190 aaKnown RBP22.97■■□□□ 1.27
CHD9-208ENST00000563410 ARHGEF3Q9NR81 526 aa22.97■■□□□ 1.27
CHD9-208ENST00000563410 DNMT3BQ9UBC3 853 aaKnown RBP22.97■■□□□ 1.27
CHD9-208ENST00000563410 COL4A3Q01955 1670 aa22.97■■□□□ 1.27
CHD9-208ENST00000563410 PODXLO00592 558 aa22.96■■□□□ 1.27
CHD9-208ENST00000563410 GUCY2CP25092 1073 aa22.96■■□□□ 1.27
CHD9-208ENST00000563410 PHLDB3Q6NSJ2 640 aa22.96■■□□□ 1.27
CHD9-208ENST00000563410 MPZL3Q6UWV2 235 aa22.96■■□□□ 1.27
CHD9-208ENST00000563410 CNTN3Q9P232 1028 aa22.96■■□□□ 1.27
CHD9-208ENST00000563410 KCNE1P15382 129 aa22.95■■□□□ 1.26
CHD9-208ENST00000563410 GPC5P78333 572 aa22.95■■□□□ 1.26
CHD9-208ENST00000563410 RAD51AP2Q09MP3 1159 aa22.95■■□□□ 1.26
CHD9-208ENST00000563410 RILPL1Q5EBL4 403 aa22.95■■□□□ 1.26
CHD9-208ENST00000563410 MCTP1Q6DN14 999 aa22.95■■□□□ 1.26
CHD9-208ENST00000563410 RTL10Q7L3V2 364 aa22.95■■□□□ 1.26
CHD9-208ENST00000563410 SPIRE2Q8WWL2 714 aa22.95■■□□□ 1.26
CHD9-208ENST00000563410 ACAP3Q96P50 834 aa22.95■■□□□ 1.26
CHD9-208ENST00000563410 TIPINQ9BVW5 301 aa22.95■■□□□ 1.26
CHD9-208ENST00000563410 SLC38A7Q9NVC3 462 aa22.95■■□□□ 1.26
CHD9-208ENST00000563410 DLGAP2Q9P1A6 1054 aa22.95■■□□□ 1.26
CHD9-208ENST00000563410 EP300Q09472 2414 aaPredicted RBP22.94■■□□□ 1.26
CHD9-208ENST00000563410 TBC1D4O60343 1298 aa22.94■■□□□ 1.26
CHD9-208ENST00000563410 ROR1Q01973 937 aa22.94■■□□□ 1.26
CHD9-208ENST00000563410 RABEP1Q15276 862 aa22.94■■□□□ 1.26
CHD9-208ENST00000563410 ZRSR1Q15695 479 aaKnown RBP22.94■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms