RNA–Protein interactions for RNA: ENST00000563109.1

RAB40C-207, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 710 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-207ENST00000563109 MYOGP15173 224 aa20.4■□□□□ 0.86
RAB40C-207ENST00000563109 DNAJB2P25686 324 aa20.4■□□□□ 0.86
RAB40C-207ENST00000563109 PBX2P40425 430 aa20.4■□□□□ 0.86
RAB40C-207ENST00000563109 SPAG1Q07617 926 aa20.4■□□□□ 0.86
RAB40C-207ENST00000563109 TUSC3Q13454 348 aa20.4■□□□□ 0.86
RAB40C-207ENST00000563109 CCDC40Q4G0X9 1142 aa20.4■□□□□ 0.86
RAB40C-207ENST00000563109 JADE1Q6IE81 842 aa20.4■□□□□ 0.86
RAB40C-207ENST00000563109 BEST2Q8NFU1 509 aa20.4■□□□□ 0.86
RAB40C-207ENST00000563109 CCDC127Q96BQ5 260 aa20.4■□□□□ 0.86
RAB40C-207ENST00000563109 ZMAT2Q96NC0 199 aaKnown RBP20.4■□□□□ 0.86
RAB40C-207ENST00000563109 FUCA2Q9BTY2 467 aa20.4■□□□□ 0.86
RAB40C-207ENST00000563109 SRRTQ9BXP5 876 aaKnown RBP20.4■□□□□ 0.86
RAB40C-207ENST00000563109 NKX2-4Q9H2Z4 354 aa20.4■□□□□ 0.86
RAB40C-207ENST00000563109 PDE11AQ9HCR9 933 aa20.4■□□□□ 0.86
RAB40C-207ENST00000563109 UBQLN1Q9UMX0 589 aaKnown RBP20.4■□□□□ 0.86
RAB40C-207ENST00000563109 PLAGL2Q9UPG8 496 aa20.4■□□□□ 0.86
RAB40C-207ENST00000563109 YBX2Q9Y2T7 364 aaKnown RBP20.4■□□□□ 0.86
RAB40C-207ENST00000563109 LINC01553A4QN01 128 aa20.39■□□□□ 0.85
RAB40C-207ENST00000563109 NFICP08651 508 aa20.39■□□□□ 0.85
RAB40C-207ENST00000563109 DLATP10515 647 aaKnown RBP20.39■□□□□ 0.85
RAB40C-207ENST00000563109 PPP2R2DQ66LE6 453 aa20.39■□□□□ 0.85
RAB40C-207ENST00000563109 FILIP1Q7Z7B0 1213 aa20.39■□□□□ 0.85
RAB40C-207ENST00000563109 WDR49Q8IV35 697 aa20.39■□□□□ 0.85
RAB40C-207ENST00000563109 ENOX1Q8TC92 643 aaKnown RBP20.39■□□□□ 0.85
RAB40C-207ENST00000563109 CACTINQ8WUQ7 758 aaKnown RBP20.39■□□□□ 0.85
RAB40C-207ENST00000563109 TIFAQ96CG3 184 aa20.39■□□□□ 0.85
RAB40C-207ENST00000563109 UROC1Q96N76 676 aa20.39■□□□□ 0.85
RAB40C-207ENST00000563109 CGRRF1Q99675 332 aa20.39■□□□□ 0.85
RAB40C-207ENST00000563109 TMEM175Q9BSA9 504 aa20.39■□□□□ 0.85
RAB40C-207ENST00000563109 CXCL16Q9H2A7 254 aa20.39■□□□□ 0.85
RAB40C-207ENST00000563109 SLC28A3Q9HAS3 691 aa20.39■□□□□ 0.85
RAB40C-207ENST00000563109 METTL14Q9HCE5 456 aaKnown RBP20.39■□□□□ 0.85
RAB40C-207ENST00000563109 TNNC2P02585 160 aa20.38■□□□□ 0.85
RAB40C-207ENST00000563109 TMEM191BP0C7N4 346 aa20.38■□□□□ 0.85
RAB40C-207ENST00000563109 TNNI1P19237 187 aa20.38■□□□□ 0.85
RAB40C-207ENST00000563109 TFAMQ00059 246 aaKnown RBP20.38■□□□□ 0.85
RAB40C-207ENST00000563109 MYL5Q02045 173 aa20.38■□□□□ 0.85
RAB40C-207ENST00000563109 ENPEPQ07075 957 aa20.38■□□□□ 0.85
RAB40C-207ENST00000563109 DSC1Q08554 894 aa20.38■□□□□ 0.85
RAB40C-207ENST00000563109 BFSP1Q12934 665 aa20.38■□□□□ 0.85
RAB40C-207ENST00000563109 SPATA1Q5VX52 437 aa20.38■□□□□ 0.85
RAB40C-207ENST00000563109 ZNF280BQ86YH2 543 aa20.38■□□□□ 0.85
RAB40C-207ENST00000563109 FAM114A1Q8IWE2 563 aa20.38■□□□□ 0.85
RAB40C-207ENST00000563109 TMC2Q8TDI7 906 aa20.38■□□□□ 0.85
RAB40C-207ENST00000563109 ANKRD36BP1Q96IX9 119 aa20.38■□□□□ 0.85
RAB40C-207ENST00000563109 ZNF558Q96NG5 402 aa20.38■□□□□ 0.85
RAB40C-207ENST00000563109 SAMD11Q96NU1 681 aa20.38■□□□□ 0.85
RAB40C-207ENST00000563109 BPIFA3Q9BQP9 254 aa20.38■□□□□ 0.85
RAB40C-207ENST00000563109 CWH43Q9H720 699 aa20.38■□□□□ 0.85
RAB40C-207ENST00000563109 NRDE2Q9H7Z3 1164 aa20.38■□□□□ 0.85
RAB40C-207ENST00000563109 MAGEC2Q9UBF1 373 aaPredicted RBP20.38■□□□□ 0.85
RAB40C-207ENST00000563109 HCSTQ9UBK5 93 aa20.38■□□□□ 0.85
RAB40C-207ENST00000563109 ARMCX3Q9UH62 379 aaPredicted RBP20.38■□□□□ 0.85
RAB40C-207ENST00000563109 PCDHB12Q9Y5F1 795 aa20.38■□□□□ 0.85
RAB40C-207ENST00000563109 DDHD2O94830 711 aa20.37■□□□□ 0.85
RAB40C-207ENST00000563109 CAVIN2O95810 425 aa20.37■□□□□ 0.85
RAB40C-207ENST00000563109 CYP3A5P20815 502 aa20.37■□□□□ 0.85
RAB40C-207ENST00000563109 CTNNB1P35222 781 aa20.37■□□□□ 0.85
RAB40C-207ENST00000563109 OR1G1P47890 313 aa20.37■□□□□ 0.85
RAB40C-207ENST00000563109 ALDH7A1P49419 539 aaKnown RBP20.37■□□□□ 0.85
RAB40C-207ENST00000563109 VAMP7P51809 220 aa20.37■□□□□ 0.85
RAB40C-207ENST00000563109 WNT7BP56706 349 aa20.37■□□□□ 0.85
RAB40C-207ENST00000563109 BCAR1P56945 870 aa20.37■□□□□ 0.85
RAB40C-207ENST00000563109 FRMD5Q7Z6J6 570 aa20.37■□□□□ 0.85
RAB40C-207ENST00000563109 EFCAB13Q8IY85 973 aa20.37■□□□□ 0.85
RAB40C-207ENST00000563109 COLGALT2Q8IYK4 626 aa20.37■□□□□ 0.85
RAB40C-207ENST00000563109 COLGALT1Q8NBJ5 622 aa20.37■□□□□ 0.85
RAB40C-207ENST00000563109 PARD3BQ8TEW8 1205 aa20.37■□□□□ 0.85
RAB40C-207ENST00000563109 CLP1Q92989 425 aaKnown RBP20.37■□□□□ 0.85
RAB40C-207ENST00000563109 C18orf25Q96B23 403 aaPredicted RBP20.37■□□□□ 0.85
RAB40C-207ENST00000563109 MED15Q96RN5 788 aa20.37■□□□□ 0.85
RAB40C-207ENST00000563109 TGS1Q96RS0 853 aaKnown RBP20.37■□□□□ 0.85
RAB40C-207ENST00000563109 THAP9Q9H5L6 903 aa20.37■□□□□ 0.85
RAB40C-207ENST00000563109 TUBGCP4Q9UGJ1 667 aa20.37■□□□□ 0.85
RAB40C-207ENST00000563109 NFE2L3Q9Y4A8 694 aa20.37■□□□□ 0.85
RAB40C-207ENST00000563109 CASTOR2A6NHX0 329 aa20.36■□□□□ 0.85
RAB40C-207ENST00000563109 STX10O60499 249 aa20.36■□□□□ 0.85
RAB40C-207ENST00000563109 PPM1AP35813 382 aa20.36■□□□□ 0.85
RAB40C-207ENST00000563109 ZNF165P49910 485 aa20.36■□□□□ 0.85
RAB40C-207ENST00000563109 AP3M2P53677 418 aa20.36■□□□□ 0.85
RAB40C-207ENST00000563109 NAB2Q15742 525 aa20.36■□□□□ 0.85
RAB40C-207ENST00000563109 DUOXA2Q1HG44 320 aa20.36■□□□□ 0.85
RAB40C-207ENST00000563109 DCAF17Q5H9S7 520 aaPredicted RBP20.36■□□□□ 0.85
RAB40C-207ENST00000563109 AOPEPQ8N6M6 819 aa20.36■□□□□ 0.85
RAB40C-207ENST00000563109 DDX27Q96GQ7 796 aaKnown RBP20.36■□□□□ 0.85
RAB40C-207ENST00000563109 MTMR12Q9C0I1 747 aa20.36■□□□□ 0.85
RAB40C-207ENST00000563109 INTS13Q9NVM9 706 aa20.36■□□□□ 0.85
RAB40C-207ENST00000563109 DNAJB4Q9UDY4 337 aa20.36■□□□□ 0.85
RAB40C-207ENST00000563109 R3HCC1Q9Y3T6 440 aaKnown RBP20.36■□□□□ 0.85
RAB40C-207ENST00000563109 LRRIQ3A6PVS8 624 aaPredicted RBP20.35■□□□□ 0.85
RAB40C-207ENST00000563109 SMTNL1A8MU46 457 aa20.35■□□□□ 0.85
RAB40C-207ENST00000563109 ALDH2P05091 517 aa20.35■□□□□ 0.85
RAB40C-207ENST00000563109 RPL9P32969 192 aaKnown RBP20.35■□□□□ 0.85
RAB40C-207ENST00000563109 SLC11A1P49279 550 aa20.35■□□□□ 0.85
RAB40C-207ENST00000563109 TAP1Q03518 808 aa20.35■□□□□ 0.85
RAB40C-207ENST00000563109 ZBTB6Q15916 424 aa20.35■□□□□ 0.85
RAB40C-207ENST00000563109 TCERG1LQ5VWI1 586 aa20.35■□□□□ 0.85
RAB40C-207ENST00000563109 LMBRD2Q68DH5 695 aaPredicted RBP20.35■□□□□ 0.85
RAB40C-207ENST00000563109 KCNT2Q6UVM3 1135 aa20.35■□□□□ 0.85
RAB40C-207ENST00000563109 LRSAM1Q6UWE0 723 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms