RNA–Protein interactions for RNA: ENST00000562542.1

KATNB1-202, Transcript of katanin regulatory subunit B1, humanhuman

TSL 2

Gene KATNB1, Length 512 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KATNB1-202ENST00000562542 PRRG1O14668 218 aa20.36■□□□□ 0.85
KATNB1-202ENST00000562542 PTGESO14684 152 aa20.36■□□□□ 0.85
KATNB1-202ENST00000562542 SSRP1Q08945 709 aaKnown RBP20.36■□□□□ 0.85
KATNB1-202ENST00000562542 BLOC1S2Q6QNY1 142 aa20.36■□□□□ 0.85
KATNB1-202ENST00000562542 POTEHQ6S545 545 aa20.36■□□□□ 0.85
KATNB1-202ENST00000562542 LONP2Q86WA8 852 aa20.36■□□□□ 0.85
KATNB1-202ENST00000562542 NFKBIZQ9BYH8 718 aa20.36■□□□□ 0.85
KATNB1-202ENST00000562542 ZNF334Q9HCZ1 680 aaPredicted RBP20.36■□□□□ 0.85
KATNB1-202ENST00000562542 AVENQ9NQS1 362 aaPredicted RBP20.36■□□□□ 0.85
KATNB1-202ENST00000562542 SNTG2Q9NY99 539 aa20.36■□□□□ 0.85
KATNB1-202ENST00000562542 ARID2Q68CP9 1835 aa20.35■□□□□ 0.85
KATNB1-202ENST00000562542 LRRIQ4A6NIV6 560 aa20.35■□□□□ 0.85
KATNB1-202ENST00000562542 M0R2N6 131 aa20.35■□□□□ 0.85
KATNB1-202ENST00000562542 ZNF197O14709 1029 aa20.35■□□□□ 0.85
KATNB1-202ENST00000562542 DGAT1O75907 488 aa20.35■□□□□ 0.85
KATNB1-202ENST00000562542 RECQL4O94761 1208 aa20.35■□□□□ 0.85
KATNB1-202ENST00000562542 B3GAT3O94766 335 aa20.35■□□□□ 0.85
KATNB1-202ENST00000562542 FGFR3P22607 806 aa20.35■□□□□ 0.85
KATNB1-202ENST00000562542 GLRA2P23416 452 aa20.35■□□□□ 0.85
KATNB1-202ENST00000562542 CCNE1P24864 410 aa20.35■□□□□ 0.85
KATNB1-202ENST00000562542 ARL2P36404 184 aa20.35■□□□□ 0.85
KATNB1-202ENST00000562542 SHC2P98077 582 aa20.35■□□□□ 0.85
KATNB1-202ENST00000562542 PPP4R3AQ6IN85 833 aa20.35■□□□□ 0.85
KATNB1-202ENST00000562542 SPEM1Q8N4L4 309 aa20.35■□□□□ 0.85
KATNB1-202ENST00000562542 FAM160A2Q8N612 972 aaPredicted RBP20.35■□□□□ 0.85
KATNB1-202ENST00000562542 TCEAL4Q96EI5 215 aa20.35■□□□□ 0.85
KATNB1-202ENST00000562542 POLR3FQ9H1D9 316 aaPredicted RBP20.35■□□□□ 0.85
KATNB1-202ENST00000562542 CCDC194A0A1B0GVG4 234 aa20.34■□□□□ 0.85
KATNB1-202ENST00000562542 ZNF263O14978 683 aa20.34■□□□□ 0.85
KATNB1-202ENST00000562542 CCNT1O60563 726 aaKnown RBP20.34■□□□□ 0.85
KATNB1-202ENST00000562542 CHRNB1P11230 501 aa20.34■□□□□ 0.85
KATNB1-202ENST00000562542 PSMC3P17980 439 aa20.34■□□□□ 0.85
KATNB1-202ENST00000562542 SPIRE1Q08AE8 756 aa20.34■□□□□ 0.85
KATNB1-202ENST00000562542 LRRC32Q14392 662 aa20.34■□□□□ 0.85
KATNB1-202ENST00000562542 GALNT17Q6IS24 598 aa20.34■□□□□ 0.85
KATNB1-202ENST00000562542 VITQ6UXI7 678 aa20.34■□□□□ 0.85
KATNB1-202ENST00000562542 ANKS3Q6ZW76 656 aa20.34■□□□□ 0.85
KATNB1-202ENST00000562542 PDZD4Q76G19 769 aaPredicted RBP20.34■□□□□ 0.85
KATNB1-202ENST00000562542 NEK8Q86SG6 692 aa20.34■□□□□ 0.85
KATNB1-202ENST00000562542 MAP4K3Q8IVH8 894 aa20.34■□□□□ 0.85
KATNB1-202ENST00000562542 DAGLBQ8NCG7 672 aa20.34■□□□□ 0.85
KATNB1-202ENST00000562542 ASB16Q96NS5 453 aa20.34■□□□□ 0.85
KATNB1-202ENST00000562542 BACE2Q9Y5Z0 518 aa20.34■□□□□ 0.85
KATNB1-202ENST00000562542 FAM208BQ5VWN6 2430 aa20.34■□□□□ 0.85
KATNB1-202ENST00000562542 F5P12259 2224 aa20.33■□□□□ 0.85
KATNB1-202ENST00000562542 RALGAPA1Q6GYQ0 2036 aa20.33■□□□□ 0.85
KATNB1-202ENST00000562542 GCFC2P16383 781 aaKnown RBP20.33■□□□□ 0.85
KATNB1-202ENST00000562542 TKTP29401 623 aaKnown RBP20.33■□□□□ 0.85
KATNB1-202ENST00000562542 ARPP19P56211 112 aa20.33■□□□□ 0.85
KATNB1-202ENST00000562542 GAS6Q14393 721 aa20.33■□□□□ 0.85
KATNB1-202ENST00000562542 SF3A2Q15428 464 aaKnown RBP20.33■□□□□ 0.85
KATNB1-202ENST00000562542 PRSS36Q5K4E3 855 aa20.33■□□□□ 0.85
KATNB1-202ENST00000562542 CYP4A22Q5TCH4 519 aa20.33■□□□□ 0.85
KATNB1-202ENST00000562542 CSGALNACT1Q8TDX6 532 aa20.33■□□□□ 0.85
KATNB1-202ENST00000562542 SMARCD2Q92925 531 aa20.33■□□□□ 0.85
KATNB1-202ENST00000562542 CXCL16Q9H2A7 254 aa20.33■□□□□ 0.85
KATNB1-202ENST00000562542 TRPV5Q9NQA5 729 aa20.33■□□□□ 0.85
KATNB1-202ENST00000562542 PRMT7Q9NVM4 692 aaPredicted RBP20.33■□□□□ 0.85
KATNB1-202ENST00000562542 VWA8A3KMH1 1905 aa20.32■□□□□ 0.84
KATNB1-202ENST00000562542 ARHGEF37A1IGU5 675 aa20.32■□□□□ 0.84
KATNB1-202ENST00000562542 WDR27A2RRH5 827 aa20.32■□□□□ 0.84
KATNB1-202ENST00000562542 I3L4J1 428 aa20.32■□□□□ 0.84
KATNB1-202ENST00000562542 N4BP3O15049 544 aa20.32■□□□□ 0.84
KATNB1-202ENST00000562542 TBX3O15119 743 aa20.32■□□□□ 0.84
KATNB1-202ENST00000562542 AXIN1O15169 862 aa20.32■□□□□ 0.84
KATNB1-202ENST00000562542 TRAPPC3O43617 180 aa20.32■□□□□ 0.84
KATNB1-202ENST00000562542 DEXIO95424 95 aa20.32■□□□□ 0.84
KATNB1-202ENST00000562542 PROS1P07225 676 aa20.32■□□□□ 0.84
KATNB1-202ENST00000562542 PDIA3P30101 505 aaKnown RBP20.32■□□□□ 0.84
KATNB1-202ENST00000562542 LIMK1P53667 647 aa20.32■□□□□ 0.84
KATNB1-202ENST00000562542 CCDC6Q16204 474 aa20.32■□□□□ 0.84
KATNB1-202ENST00000562542 MAEAQ7L5Y9 396 aa20.32■□□□□ 0.84
KATNB1-202ENST00000562542 NOSTRINQ8IVI9 506 aa20.32■□□□□ 0.84
KATNB1-202ENST00000562542 ZBTB8OSQ8IWT0 167 aa20.32■□□□□ 0.84
KATNB1-202ENST00000562542 ZNF461Q8TAF7 563 aa20.32■□□□□ 0.84
KATNB1-202ENST00000562542 DEPDC1BQ8WUY9 529 aa20.32■□□□□ 0.84
KATNB1-202ENST00000562542 HAS1Q92839 578 aa20.32■□□□□ 0.84
KATNB1-202ENST00000562542 DDX27Q96GQ7 796 aaKnown RBP20.32■□□□□ 0.84
KATNB1-202ENST00000562542 PRIMPOLQ96LW4 560 aa20.32■□□□□ 0.84
KATNB1-202ENST00000562542 CYP4F11Q9HBI6 524 aa20.32■□□□□ 0.84
KATNB1-202ENST00000562542 RBM12Q9NTZ6 932 aaKnown RBP20.32■□□□□ 0.84
KATNB1-202ENST00000562542 GDAQ9Y2T3 454 aa20.32■□□□□ 0.84
KATNB1-202ENST00000562542 CNOT1A5YKK6 2376 aaKnown RBP20.31■□□□□ 0.84
KATNB1-202ENST00000562542 TICRRQ7Z2Z1 1910 aa20.31■□□□□ 0.84
KATNB1-202ENST00000562542 CEP295Q9C0D2 2601 aa20.31■□□□□ 0.84
KATNB1-202ENST00000562542 NRG2O14511 850 aaPredicted RBP20.31■□□□□ 0.84
KATNB1-202ENST00000562542 CPLX1O14810 134 aa20.31■□□□□ 0.84
KATNB1-202ENST00000562542 SLITRK3O94933 977 aa20.31■□□□□ 0.84
KATNB1-202ENST00000562542 BAG4O95429 457 aaKnown RBP20.31■□□□□ 0.84
KATNB1-202ENST00000562542 RPS6KB1P23443 525 aa20.31■□□□□ 0.84
KATNB1-202ENST00000562542 IGFBP6P24592 240 aaPredicted RBP20.31■□□□□ 0.84
KATNB1-202ENST00000562542 VIPR2P41587 438 aa20.31■□□□□ 0.84
KATNB1-202ENST00000562542 CLCNKBP51801 687 aa20.31■□□□□ 0.84
KATNB1-202ENST00000562542 KPNA1P52294 538 aaPredicted RBP20.31■□□□□ 0.84
KATNB1-202ENST00000562542 ROR1Q01973 937 aa20.31■□□□□ 0.84
KATNB1-202ENST00000562542 PTGDRQ13258 359 aa20.31■□□□□ 0.84
KATNB1-202ENST00000562542 NAB2Q15742 525 aa20.31■□□□□ 0.84
KATNB1-202ENST00000562542 NPY5RQ15761 445 aa20.31■□□□□ 0.84
KATNB1-202ENST00000562542 POTEDQ86YR6 584 aa20.31■□□□□ 0.84
KATNB1-202ENST00000562542 YAF2Q8IY57 180 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms