RNA–Protein interactions for RNA: ENST00000562534.5

USB1-206, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 562 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-206ENST00000562534 NLRP12P59046 1061 aa17.76■□□□□ 0.43
USB1-206ENST00000562534 FKBP3Q00688 224 aaKnown RBP17.76■□□□□ 0.43
USB1-206ENST00000562534 PLCB3Q01970 1234 aa17.76■□□□□ 0.43
USB1-206ENST00000562534 GPM6BQ13491 265 aa17.76■□□□□ 0.43
USB1-206ENST00000562534 NAB2Q15742 525 aa17.76■□□□□ 0.43
USB1-206ENST00000562534 ZCWPW2Q504Y3 356 aa17.76■□□□□ 0.43
USB1-206ENST00000562534 CT47A1Q5JQC4 288 aaPredicted RBP17.76■□□□□ 0.43
USB1-206ENST00000562534 GLRA4Q5JXX5 417 aa17.76■□□□□ 0.43
USB1-206ENST00000562534 ANKRD40Q6AI12 368 aa17.76■□□□□ 0.43
USB1-206ENST00000562534 SASS6Q6UVJ0 657 aa17.76■□□□□ 0.43
USB1-206ENST00000562534 CBWD2Q8IUF1 395 aa17.76■□□□□ 0.43
USB1-206ENST00000562534 BRSK2Q8IWQ3 736 aa17.76■□□□□ 0.43
USB1-206ENST00000562534 KLHL23Q8NBE8 558 aa17.76■□□□□ 0.43
USB1-206ENST00000562534 ZSWIM2Q8NEG5 633 aa17.76■□□□□ 0.43
USB1-206ENST00000562534 CACTINQ8WUQ7 758 aaKnown RBP17.76■□□□□ 0.43
USB1-206ENST00000562534 KIF12Q96FN5 646 aa17.76■□□□□ 0.43
USB1-206ENST00000562534 HCSTQ9UBK5 93 aa17.76■□□□□ 0.43
USB1-206ENST00000562534 DACH1Q9UI36 760 aa17.76■□□□□ 0.43
USB1-206ENST00000562534 UBQLN1Q9UMX0 589 aaKnown RBP17.76■□□□□ 0.43
USB1-206ENST00000562534 C2CD2Q9Y426 696 aa17.76■□□□□ 0.43
USB1-206ENST00000562534 GBF1Q92538 1859 aa17.75■□□□□ 0.43
USB1-206ENST00000562534 CETN3O15182 167 aa17.75■□□□□ 0.43
USB1-206ENST00000562534 MAPK13O15264 365 aa17.75■□□□□ 0.43
USB1-206ENST00000562534 FGF18O76093 207 aa17.75■□□□□ 0.43
USB1-206ENST00000562534 SLC11A1P49279 550 aa17.75■□□□□ 0.43
USB1-206ENST00000562534 UBE3AQ05086 875 aa17.75■□□□□ 0.43
USB1-206ENST00000562534 GRIN2CQ14957 1233 aa17.75■□□□□ 0.43
USB1-206ENST00000562534 DCLRE1AQ6PJP8 1040 aa17.75■□□□□ 0.43
USB1-206ENST00000562534 SLC39A11Q8N1S5 342 aa17.75■□□□□ 0.43
USB1-206ENST00000562534 DEFB123Q8N688 67 aa17.75■□□□□ 0.43
USB1-206ENST00000562534 BEST2Q8NFU1 509 aa17.75■□□□□ 0.43
USB1-206ENST00000562534 MFSD14AQ96MC6 490 aa17.75■□□□□ 0.43
USB1-206ENST00000562534 NT5C1B-RDH14C9J2C7 533 aa17.74■□□□□ 0.43
USB1-206ENST00000562534 TULP1O00294 542 aaPredicted RBP17.74■□□□□ 0.43
USB1-206ENST00000562534 PSMC2P35998 433 aaKnown RBP17.74■□□□□ 0.43
USB1-206ENST00000562534 SPAG1Q07617 926 aa17.74■□□□□ 0.43
USB1-206ENST00000562534 TMEM132DQ14C87 1099 aa17.74■□□□□ 0.43
USB1-206ENST00000562534 SPATA1Q5VX52 437 aa17.74■□□□□ 0.43
USB1-206ENST00000562534 CEP135Q66GS9 1140 aa17.74■□□□□ 0.43
USB1-206ENST00000562534 JADE1Q6IE81 842 aa17.74■□□□□ 0.43
USB1-206ENST00000562534 KLHL10Q6JEL2 608 aa17.74■□□□□ 0.43
USB1-206ENST00000562534 CAVIN1Q6NZI2 390 aaKnown RBP17.74■□□□□ 0.43
USB1-206ENST00000562534 SPRED2Q7Z698 418 aa17.74■□□□□ 0.43
USB1-206ENST00000562534 USP37Q86T82 979 aa17.74■□□□□ 0.43
USB1-206ENST00000562534 NELFBQ8WX92 580 aa17.74■□□□□ 0.43
USB1-206ENST00000562534 TMEM169Q96HH4 297 aa17.74■□□□□ 0.43
USB1-206ENST00000562534 IGSF21Q96ID5 467 aa17.74■□□□□ 0.43
USB1-206ENST00000562534 FNBP1Q96RU3 617 aa17.74■□□□□ 0.43
USB1-206ENST00000562534 PDE11AQ9HCR9 933 aa17.74■□□□□ 0.43
USB1-206ENST00000562534 LMCD1Q9NZU5 365 aa17.74■□□□□ 0.43
USB1-206ENST00000562534 TMEM63CQ9P1W3 806 aa17.74■□□□□ 0.43
USB1-206ENST00000562534 LZTS1Q9Y250 596 aa17.74■□□□□ 0.43
USB1-206ENST00000562534 B4GALT3O60512 393 aa17.73■□□□□ 0.43
USB1-206ENST00000562534 TADA2AO75478 443 aa17.73■□□□□ 0.43
USB1-206ENST00000562534 FGFR1OPO95684 399 aaKnown RBP17.73■□□□□ 0.43
USB1-206ENST00000562534 ITGB1P05556 798 aa17.73■□□□□ 0.43
USB1-206ENST00000562534 CYP24A1Q07973 514 aa17.73■□□□□ 0.43
USB1-206ENST00000562534 PAK1Q13153 545 aa17.73■□□□□ 0.43
USB1-206ENST00000562534 BMS1Q14692 1282 aaKnown RBP17.73■□□□□ 0.43
USB1-206ENST00000562534 PSMD6Q15008 389 aa17.73■□□□□ 0.43
USB1-206ENST00000562534 PTPROQ16827 1216 aa17.73■□□□□ 0.43
USB1-206ENST00000562534 UPP1Q16831 310 aa17.73■□□□□ 0.43
USB1-206ENST00000562534 SPPL3Q8TCT6 385 aa17.73■□□□□ 0.43
USB1-206ENST00000562534 C18orf25Q96B23 403 aaPredicted RBP17.73■□□□□ 0.43
USB1-206ENST00000562534 FAM161BQ96MY7 647 aa17.73■□□□□ 0.43
USB1-206ENST00000562534 MKNK1Q9BUB5 465 aa17.73■□□□□ 0.43
USB1-206ENST00000562534 LMAN2LQ9H0V9 348 aa17.73■□□□□ 0.43
USB1-206ENST00000562534 PRDM12Q9H4Q4 367 aa17.73■□□□□ 0.43
USB1-206ENST00000562534 RWDD2AQ9UIY3 292 aa17.73■□□□□ 0.43
USB1-206ENST00000562534 CASTOR2A6NHX0 329 aa17.72■□□□□ 0.43
USB1-206ENST00000562534 PAX3P23760 479 aa17.72■□□□□ 0.43
USB1-206ENST00000562534 ERCC5P28715 1186 aaPredicted RBP17.72■□□□□ 0.43
USB1-206ENST00000562534 LRPAP1P30533 357 aa17.72■□□□□ 0.43
USB1-206ENST00000562534 PBX3P40426 434 aa17.72■□□□□ 0.43
USB1-206ENST00000562534 CASP4P49662 377 aa17.72■□□□□ 0.43
USB1-206ENST00000562534 CLCNKBP51801 687 aa17.72■□□□□ 0.43
USB1-206ENST00000562534 PMS1P54277 932 aaKnown RBP17.72■□□□□ 0.43
USB1-206ENST00000562534 ENPEPQ07075 957 aa17.72■□□□□ 0.43
USB1-206ENST00000562534 DUOXA2Q1HG44 320 aa17.72■□□□□ 0.43
USB1-206ENST00000562534 PDE12Q6L8Q7 609 aaKnown RBP17.72■□□□□ 0.43
USB1-206ENST00000562534 INTS8Q75QN2 995 aaKnown RBP17.72■□□□□ 0.43
USB1-206ENST00000562534 FILIP1Q7Z7B0 1213 aa17.72■□□□□ 0.43
USB1-206ENST00000562534 DDX53Q86TM3 631 aaKnown RBP17.72■□□□□ 0.43
USB1-206ENST00000562534 TMC2Q8TDI7 906 aa17.72■□□□□ 0.43
USB1-206ENST00000562534 CCDC127Q96BQ5 260 aa17.72■□□□□ 0.43
USB1-206ENST00000562534 CEP63Q96MT8 703 aa17.72■□□□□ 0.43
USB1-206ENST00000562534 GAS2L1Q99501 681 aaPredicted RBP17.72■□□□□ 0.43
USB1-206ENST00000562534 ALG13Q9NP73 1137 aaKnown RBP17.72■□□□□ 0.43
USB1-206ENST00000562534 DPP3Q9NY33 737 aa17.72■□□□□ 0.43
USB1-206ENST00000562534 PRG3Q9Y2Y8 225 aaPredicted RBP17.72■□□□□ 0.43
USB1-206ENST00000562534 CITO14578 2027 aa17.71■□□□□ 0.43
USB1-206ENST00000562534 TMEM189-UBE2V1I3L0A0 370 aa17.71■□□□□ 0.43
USB1-206ENST00000562534 RFXAPO00287 272 aa17.71■□□□□ 0.43
USB1-206ENST00000562534 IKBKBO14920 756 aa17.71■□□□□ 0.43
USB1-206ENST00000562534 TRAPPC3O43617 180 aa17.71■□□□□ 0.43
USB1-206ENST00000562534 AKAP3O75969 853 aa17.71■□□□□ 0.43
USB1-206ENST00000562534 B3GAT3O94766 335 aa17.71■□□□□ 0.43
USB1-206ENST00000562534 NFICP08651 508 aa17.71■□□□□ 0.43
USB1-206ENST00000562534 KRT13P13646 458 aa17.71■□□□□ 0.43
USB1-206ENST00000562534 TNNI1P19237 187 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms