RNA–Protein interactions for RNA: ENST00000562389.5

CLK3-207, Transcript of CDC like kinase 3, humanhuman

TSL 4

Gene CLK3, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-207ENST00000562389 EXTL3O43909 919 aa18.18■□□□□ 0.5
CLK3-207ENST00000562389 SMC2O95347 1197 aa18.18■□□□□ 0.5
CLK3-207ENST00000562389 SOX4Q06945 474 aaPredicted RBP18.18■□□□□ 0.5
CLK3-207ENST00000562389 TCEAL5Q5H9L2 206 aa18.18■□□□□ 0.5
CLK3-207ENST00000562389 HS2ST1Q7LGA3 356 aa18.18■□□□□ 0.5
CLK3-207ENST00000562389 VPS52Q8N1B4 723 aa18.18■□□□□ 0.5
CLK3-207ENST00000562389 GPD1LQ8N335 351 aa18.18■□□□□ 0.5
CLK3-207ENST00000562389 SPATA20Q8TB22 786 aa18.18■□□□□ 0.5
CLK3-207ENST00000562389 PPP2R3CQ969Q6 453 aa18.18■□□□□ 0.5
CLK3-207ENST00000562389 SAAL1Q96ER3 474 aa18.18■□□□□ 0.5
CLK3-207ENST00000562389 DDX27Q96GQ7 796 aaKnown RBP18.18■□□□□ 0.5
CLK3-207ENST00000562389 GBP4Q96PP9 640 aa18.18■□□□□ 0.5
CLK3-207ENST00000562389 GSDMAQ96QA5 445 aa18.18■□□□□ 0.5
CLK3-207ENST00000562389 HERC2P3Q9BVR0 1158 aa18.18■□□□□ 0.5
CLK3-207ENST00000562389 ASB7Q9H672 318 aa18.18■□□□□ 0.5
CLK3-207ENST00000562389 GOLGA2P5Q9HBQ8 144 aa18.18■□□□□ 0.5
CLK3-207ENST00000562389 RMND1Q9NWS8 449 aa18.18■□□□□ 0.5
CLK3-207ENST00000562389 ADAM28Q9UKQ2 775 aa18.18■□□□□ 0.5
CLK3-207ENST00000562389 XPOTO43592 962 aaKnown RBP18.17■□□□□ 0.5
CLK3-207ENST00000562389 KIF20AO95235 890 aa18.17■□□□□ 0.5
CLK3-207ENST00000562389 KIF4AO95239 1232 aa18.17■□□□□ 0.5
CLK3-207ENST00000562389 SOD2P04179 222 aa18.17■□□□□ 0.5
CLK3-207ENST00000562389 CTSAP10619 480 aa18.17■□□□□ 0.5
CLK3-207ENST00000562389 CYP3A5P20815 502 aa18.17■□□□□ 0.5
CLK3-207ENST00000562389 SMC1AQ14683 1233 aaKnown RBP18.17■□□□□ 0.5
CLK3-207ENST00000562389 BMS1Q14692 1282 aaKnown RBP18.17■□□□□ 0.5
CLK3-207ENST00000562389 ZBTB6Q15916 424 aa18.17■□□□□ 0.5
CLK3-207ENST00000562389 UPP1Q16831 310 aa18.17■□□□□ 0.5
CLK3-207ENST00000562389 PLPP4Q5VZY2 271 aa18.17■□□□□ 0.5
CLK3-207ENST00000562389 FUT10Q6P4F1 479 aa18.17■□□□□ 0.5
CLK3-207ENST00000562389 TMC7Q7Z402 723 aa18.17■□□□□ 0.5
CLK3-207ENST00000562389 BRSK2Q8IWQ3 736 aa18.17■□□□□ 0.5
CLK3-207ENST00000562389 C12orf56Q8IXR9 622 aa18.17■□□□□ 0.5
CLK3-207ENST00000562389 ZSWIM2Q8NEG5 633 aa18.17■□□□□ 0.5
CLK3-207ENST00000562389 GOLGA5Q8TBA6 731 aa18.17■□□□□ 0.5
CLK3-207ENST00000562389 MICAL1Q8TDZ2 1067 aa18.17■□□□□ 0.5
CLK3-207ENST00000562389 RABGGTAQ92696 567 aa18.17■□□□□ 0.5
CLK3-207ENST00000562389 C18orf25Q96B23 403 aaPredicted RBP18.17■□□□□ 0.5
CLK3-207ENST00000562389 KIF12Q96FN5 646 aa18.17■□□□□ 0.5
CLK3-207ENST00000562389 FAM213AQ9BRX8 229 aa18.17■□□□□ 0.5
CLK3-207ENST00000562389 PCIF1Q9H4Z3 704 aa18.17■□□□□ 0.5
CLK3-207ENST00000562389 HSPBP1Q9NZL4 362 aa18.17■□□□□ 0.5
CLK3-207ENST00000562389 UBQLN1Q9UMX0 589 aaKnown RBP18.17■□□□□ 0.5
CLK3-207ENST00000562389 DERAQ9Y315 318 aa18.17■□□□□ 0.5
CLK3-207ENST00000562389 PCDHGC5Q9Y5F6 944 aa18.17■□□□□ 0.5
CLK3-207ENST00000562389 TADA2AO75478 443 aa18.16■□□□□ 0.5
CLK3-207ENST00000562389 IL18RAPO95256 599 aa18.16■□□□□ 0.5
CLK3-207ENST00000562389 RPL9P32969 192 aaKnown RBP18.16■□□□□ 0.5
CLK3-207ENST00000562389 CLCNKBP51801 687 aa18.16■□□□□ 0.5
CLK3-207ENST00000562389 DCLRE1AQ6PJP8 1040 aa18.16■□□□□ 0.5
CLK3-207ENST00000562389 ADGRD2Q7Z7M1 963 aa18.16■□□□□ 0.5
CLK3-207ENST00000562389 SMARCE1Q969G3 411 aa18.16■□□□□ 0.5
CLK3-207ENST00000562389 FAM212AQ96EL1 285 aa18.16■□□□□ 0.5
CLK3-207ENST00000562389 FBXL18Q96ME1 805 aa18.16■□□□□ 0.5
CLK3-207ENST00000562389 KCTD10Q9H3F6 313 aa18.16■□□□□ 0.5
CLK3-207ENST00000562389 KIAA1586Q9HCI6 787 aa18.16■□□□□ 0.5
CLK3-207ENST00000562389 TUBGCP4Q9UGJ1 667 aa18.16■□□□□ 0.5
CLK3-207ENST00000562389 C2CD2Q9Y426 696 aa18.16■□□□□ 0.5
CLK3-207ENST00000562389 PCDHA5Q9Y5H7 936 aa18.16■□□□□ 0.5
CLK3-207ENST00000562389 IRAK3Q9Y616 596 aa18.16■□□□□ 0.5
CLK3-207ENST00000562389 SF3B1O75533 1304 aaKnown RBP eCLIP18.16■□□□□ 0.5
CLK3-207ENST00000562389 GOLGA8IPA6NC78 632 aa18.15■□□□□ 0.5
CLK3-207ENST00000562389 GOLGA8JA6NMD2 632 aa18.15■□□□□ 0.5
CLK3-207ENST00000562389 PODXLO00592 558 aa18.15■□□□□ 0.5
CLK3-207ENST00000562389 CLIC2O15247 247 aa18.15■□□□□ 0.5
CLK3-207ENST00000562389 NFICP08651 508 aa18.15■□□□□ 0.5
CLK3-207ENST00000562389 LRPAP1P30533 357 aa18.15■□□□□ 0.5
CLK3-207ENST00000562389 SPAG1Q07617 926 aa18.15■□□□□ 0.5
CLK3-207ENST00000562389 HYAL1Q12794 435 aa18.15■□□□□ 0.5
CLK3-207ENST00000562389 COL19A1Q14993 1142 aa18.15■□□□□ 0.5
CLK3-207ENST00000562389 TMEM132DQ14C87 1099 aa18.15■□□□□ 0.5
CLK3-207ENST00000562389 JADE1Q6IE81 842 aa18.15■□□□□ 0.5
CLK3-207ENST00000562389 NT5DC4Q86YG4 428 aa18.15■□□□□ 0.5
CLK3-207ENST00000562389 GUF1Q8N442 669 aaKnown RBP18.15■□□□□ 0.5
CLK3-207ENST00000562389 TMEM174Q8WUU8 243 aa18.15■□□□□ 0.5
CLK3-207ENST00000562389 ERCC4Q92889 916 aaPredicted RBP18.15■□□□□ 0.5
CLK3-207ENST00000562389 CDCA3Q99618 268 aaPredicted RBP18.15■□□□□ 0.5
CLK3-207ENST00000562389 GTPBP4Q9BZE4 634 aaKnown RBP18.15■□□□□ 0.5
CLK3-207ENST00000562389 GPR62Q9BZJ7 368 aa18.15■□□□□ 0.5
CLK3-207ENST00000562389 RBAKQ9NYW8 714 aaPredicted RBP18.15■□□□□ 0.5
CLK3-207ENST00000562389 VWA8A3KMH1 1905 aa18.15■□□□□ 0.5
CLK3-207ENST00000562389 FSD2A1L4K1 749 aa18.14■□□□□ 0.49
CLK3-207ENST00000562389 C2orf71A6NGG8 1288 aa18.14■□□□□ 0.49
CLK3-207ENST00000562389 HIDE1A8MVS5 230 aa18.14■□□□□ 0.49
CLK3-207ENST00000562389 PDXKO00764 312 aa18.14■□□□□ 0.49
CLK3-207ENST00000562389 NCK2O43639 380 aa18.14■□□□□ 0.49
CLK3-207ENST00000562389 B3GAT3O94766 335 aa18.14■□□□□ 0.49
CLK3-207ENST00000562389 ELAVL2Q12926 359 aaKnown RBP18.14■□□□□ 0.49
CLK3-207ENST00000562389 SKIV2LQ15477 1246 aaKnown RBP18.14■□□□□ 0.49
CLK3-207ENST00000562389 PTPN14Q15678 1187 aa18.14■□□□□ 0.49
CLK3-207ENST00000562389 COBLL1Q53SF7 1204 aa18.14■□□□□ 0.49
CLK3-207ENST00000562389 ZNF658Q5TYW1 1059 aaPredicted RBP18.14■□□□□ 0.49
CLK3-207ENST00000562389 SPATA1Q5VX52 437 aa18.14■□□□□ 0.49
CLK3-207ENST00000562389 CD300LGQ6UXG3 332 aa18.14■□□□□ 0.49
CLK3-207ENST00000562389 MRPL43Q8N983 215 aaKnown RBP18.14■□□□□ 0.49
CLK3-207ENST00000562389 XXYLT1Q8NBI6 393 aa18.14■□□□□ 0.49
CLK3-207ENST00000562389 C3orf58Q8NDZ4 430 aa18.14■□□□□ 0.49
CLK3-207ENST00000562389 BEST2Q8NFU1 509 aa18.14■□□□□ 0.49
CLK3-207ENST00000562389 HASPINQ8TF76 798 aa18.14■□□□□ 0.49
CLK3-207ENST00000562389 CHST7Q9NS84 486 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms